RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 FAM161BQ96MY7 647 aa17.74■□□□□ 0.43
SRRT-219ENST00000641476 GUCD1Q96NT3 240 aa17.74■□□□□ 0.43
SRRT-219ENST00000641476 DNAJC2Q99543 621 aaKnown RBP17.74■□□□□ 0.43
SRRT-219ENST00000641476 GINM1Q9NU53 330 aa17.74■□□□□ 0.43
SRRT-219ENST00000641476 PLXNB2O15031 1838 aa17.73■□□□□ 0.43
SRRT-219ENST00000641476 IFIT2P09913 472 aaKnown RBP17.73■□□□□ 0.43
SRRT-219ENST00000641476 PDE6AP16499 860 aa17.73■□□□□ 0.43
SRRT-219ENST00000641476 MAP3K21Q5TCX8 1036 aa17.73■□□□□ 0.43
SRRT-219ENST00000641476 EHD4Q9H223 541 aa17.73■□□□□ 0.43
SRRT-219ENST00000641476 TMOD4Q9NZQ9 345 aa17.73■□□□□ 0.43
SRRT-219ENST00000641476 GOLIM4O00461 696 aa17.72■□□□□ 0.43
SRRT-219ENST00000641476 RAB11FIP3O75154 756 aa17.72■□□□□ 0.43
SRRT-219ENST00000641476 GH2P01242 217 aa17.72■□□□□ 0.43
SRRT-219ENST00000641476 IRX3P78415 501 aaPredicted RBP17.72■□□□□ 0.43
SRRT-219ENST00000641476 LRRC26Q2I0M4 334 aa17.72■□□□□ 0.43
SRRT-219ENST00000641476 C20orf194Q5TEA3 1177 aa17.72■□□□□ 0.43
SRRT-219ENST00000641476 BCL11AQ9H165 835 aa17.72■□□□□ 0.43
SRRT-219ENST00000641476 CHMP4BQ9H444 224 aaKnown RBP17.72■□□□□ 0.43
SRRT-219ENST00000641476 SERPINB13Q9UIV8 391 aa17.72■□□□□ 0.43
SRRT-219ENST00000641476 MYH8P13535 1937 aa17.71■□□□□ 0.43
SRRT-219ENST00000641476 MAGEB6P1A0A0J9YX57 407 aa17.71■□□□□ 0.43
SRRT-219ENST00000641476 USP17L10C9JJH3 530 aa17.71■□□□□ 0.43
SRRT-219ENST00000641476 PEX10O60683 326 aa17.71■□□□□ 0.43
SRRT-219ENST00000641476 COL6A1P12109 1028 aa17.71■□□□□ 0.43
SRRT-219ENST00000641476 SLC9C2Q5TAH2 1124 aa17.71■□□□□ 0.43
SRRT-219ENST00000641476 TATDN1Q6P1N9 297 aa17.71■□□□□ 0.43
SRRT-219ENST00000641476 EDC3Q96F86 508 aaKnown RBP17.71■□□□□ 0.43
SRRT-219ENST00000641476 MORF4L1Q9UBU8 362 aa17.71■□□□□ 0.43
SRRT-219ENST00000641476 VCANP13611 3396 aa17.71■□□□□ 0.43
SRRT-219ENST00000641476 ZNF532Q9HCE3 1301 aa17.71■□□□□ 0.42
SRRT-219ENST00000641476 TCRBV5S4A2TA0A5A2 114 aa17.7■□□□□ 0.42
SRRT-219ENST00000641476 C19orf81C9J6K1 198 aa17.7■□□□□ 0.42
SRRT-219ENST00000641476 ZKSCAN1P17029 563 aaPredicted RBP17.7■□□□□ 0.42
SRRT-219ENST00000641476 HOXA7P31268 230 aaPredicted RBP17.7■□□□□ 0.42
SRRT-219ENST00000641476 TTC6Q86TZ1 520 aa17.7■□□□□ 0.42
SRRT-219ENST00000641476 SOCS4Q8WXH5 440 aa17.7■□□□□ 0.42
SRRT-219ENST00000641476 NUDT12Q9BQG2 462 aa17.7■□□□□ 0.42
SRRT-219ENST00000641476 POTEB2H3BUK9 544 aa17.69■□□□□ 0.42
SRRT-219ENST00000641476 CCND3P30281 292 aaPredicted RBP17.69■□□□□ 0.42
SRRT-219ENST00000641476 HERVK_113P62684 666 aa17.69■□□□□ 0.42
SRRT-219ENST00000641476 CACNB2Q08289 660 aaPredicted RBP17.69■□□□□ 0.42
SRRT-219ENST00000641476 PDE3AQ14432 1141 aa17.69■□□□□ 0.42
SRRT-219ENST00000641476 LCORLQ8N3X6 602 aa17.69■□□□□ 0.42
SRRT-219ENST00000641476 FEZ1Q99689 392 aa17.69■□□□□ 0.42
SRRT-219ENST00000641476 CRNKL1Q9BZJ0 848 aaKnown RBP17.69■□□□□ 0.42
SRRT-219ENST00000641476 PAG1Q9NWQ8 432 aa17.69■□□□□ 0.42
SRRT-219ENST00000641476 BAZ2AQ9UIF9 1905 aaKnown RBP17.68■□□□□ 0.42
SRRT-219ENST00000641476 SHMT1P34896 483 aa17.68■□□□□ 0.42
SRRT-219ENST00000641476 PLCD1P51178 756 aa17.68■□□□□ 0.42
SRRT-219ENST00000641476 EVX2Q03828 476 aa17.68■□□□□ 0.42
SRRT-219ENST00000641476 FAM109BQ6ICB4 259 aaPredicted RBP17.68■□□□□ 0.42
SRRT-219ENST00000641476 USP17L2Q6R6M4 530 aa17.68■□□□□ 0.42
SRRT-219ENST00000641476 LBHD1Q9BQE6 289 aaPredicted RBP17.68■□□□□ 0.42
SRRT-219ENST00000641476 TXNRD2Q9NNW7 524 aa17.68■□□□□ 0.42
SRRT-219ENST00000641476 EMILIN3Q9NT22 766 aa17.68■□□□□ 0.42
SRRT-219ENST00000641476 POLR3DP05423 398 aaPredicted RBP17.67■□□□□ 0.42
SRRT-219ENST00000641476 XRCC5P13010 732 aaKnown RBP17.67■□□□□ 0.42
SRRT-219ENST00000641476 GABPAQ06546 454 aa17.67■□□□□ 0.42
SRRT-219ENST00000641476 RAB3GAP1Q15042 981 aa17.67■□□□□ 0.42
SRRT-219ENST00000641476 ZYXQ15942 572 aaKnown RBP17.67■□□□□ 0.42
SRRT-219ENST00000641476 CCL14Q16627 93 aa17.67■□□□□ 0.42
SRRT-219ENST00000641476 ABCB5Q2M3G0 1257 aa17.67■□□□□ 0.42
SRRT-219ENST00000641476 CERKLQ49MI3 558 aaPredicted RBP17.67■□□□□ 0.42
SRRT-219ENST00000641476 ZNF697Q5TEC3 545 aa17.67■□□□□ 0.42
SRRT-219ENST00000641476 LHX8Q68G74 356 aa17.67■□□□□ 0.42
SRRT-219ENST00000641476 GPRC5AQ8NFJ5 357 aa17.67■□□□□ 0.42
SRRT-219ENST00000641476 SDR42E1Q8WUS8 393 aa17.67■□□□□ 0.42
SRRT-219ENST00000641476 C12orf42Q96LP6 360 aa17.67■□□□□ 0.42
SRRT-219ENST00000641476 P2RX7Q99572 595 aaKnown RBP17.67■□□□□ 0.42
SRRT-219ENST00000641476 BOLA2Q9H3K6 86 aa17.67■□□□□ 0.42
SRRT-219ENST00000641476 ATP5JP18859 108 aa17.66■□□□□ 0.42
SRRT-219ENST00000641476 ADD2P35612 726 aa17.66■□□□□ 0.42
SRRT-219ENST00000641476 CCAR1Q8IX12 1150 aaKnown RBP17.66■□□□□ 0.42
SRRT-219ENST00000641476 TRMT44Q8IYL2 757 aaKnown RBP17.66■□□□□ 0.42
SRRT-219ENST00000641476 HAUS7Q99871 368 aa17.66■□□□□ 0.42
SRRT-219ENST00000641476 LRRCC1Q9C099 1032 aa17.66■□□□□ 0.42
SRRT-219ENST00000641476 DCP1AQ9NPI6 582 aaPredicted RBP17.66■□□□□ 0.42
SRRT-219ENST00000641476 MCM9Q9NXL9 1143 aa17.66■□□□□ 0.42
SRRT-219ENST00000641476 A0A0G2JMZ2 1700 aa17.66■□□□□ 0.42
SRRT-219ENST00000641476 MBD4O95243 580 aa17.65■□□□□ 0.42
SRRT-219ENST00000641476 MAPK4P31152 587 aa17.65■□□□□ 0.42
SRRT-219ENST00000641476 RGS2P41220 211 aa17.65■□□□□ 0.42
SRRT-219ENST00000641476 SLFNL1Q499Z3 407 aa17.65■□□□□ 0.42
SRRT-219ENST00000641476 GTF3C2Q8WUA4 911 aaPredicted RBP17.65■□□□□ 0.42
SRRT-219ENST00000641476 SENP6Q9GZR1 1112 aaPredicted RBP17.65■□□□□ 0.42
SRRT-219ENST00000641476 KIAA1683Q9H0B3 1180 aa17.65■□□□□ 0.42
SRRT-219ENST00000641476 ARMT1Q9H993 441 aa17.65■□□□□ 0.42
SRRT-219ENST00000641476 SPTBN5Q9NRC6 3674 aaKnown RBP17.65■□□□□ 0.42
SRRT-219ENST00000641476 LAMA2P24043 3122 aaKnown RBP17.64■□□□□ 0.41
SRRT-219ENST00000641476 SMARCA5O60264 1052 aaPredicted RBP17.64■□□□□ 0.41
SRRT-219ENST00000641476 CYP2D6P10635 497 aa17.64■□□□□ 0.41
SRRT-219ENST00000641476 VCAM1P19320 739 aa17.64■□□□□ 0.41
SRRT-219ENST00000641476 GUCY1A2P33402 732 aa17.64■□□□□ 0.41
SRRT-219ENST00000641476 USP14P54578 494 aa17.64■□□□□ 0.41
SRRT-219ENST00000641476 ERVK-9P63128 1117 aa17.64■□□□□ 0.41
SRRT-219ENST00000641476 ERVK-24P63145 666 aa17.64■□□□□ 0.41
SRRT-219ENST00000641476 GPR142Q7Z601 462 aa17.64■□□□□ 0.41
SRRT-219ENST00000641476 ACER1Q8TDN7 264 aa17.64■□□□□ 0.41
SRRT-219ENST00000641476 APBA2Q99767 749 aa17.64■□□□□ 0.41
SRRT-219ENST00000641476 PAGR1Q9BTK6 254 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 271 ms