RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ZBTB21Q9ULJ3 1066 aa12.02□□□□□ -0.49
PHGDH-212ENST00000641247 PDS5AQ29RF7 1337 aaKnown RBP12.02□□□□□ -0.49
PHGDH-212ENST00000641247 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-212ENST00000641247 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-212ENST00000641247 COBLO75128 1261 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 IL15P40933 162 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-212ENST00000641247 LRRC41Q15345 812 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 CCDC85BQ15834 202 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-212ENST00000641247 ZYXQ15942 572 aaKnown RBP12.01□□□□□ -0.49
PHGDH-212ENST00000641247 C1orf53Q5VUE5 145 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 USP17L2Q6R6M4 530 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 CATSPERGQ6ZRH7 1159 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 C16orf59Q7L2K0 433 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 ADGRA1Q86SQ6 560 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 MAPKAPK5Q8IW41 473 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 ARRDC4Q8NCT1 418 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 UHRF1Q96T88 793 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-212ENST00000641247 PRDM12Q9H4Q4 367 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 PALD1Q9ULE6 856 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 MYH2Q9UKX2 1941 aa12.01□□□□□ -0.49
PHGDH-212ENST00000641247 A0A1B0GUL7 405 aa12□□□□□ -0.49
PHGDH-212ENST00000641247 TFCP2Q12800 502 aa12□□□□□ -0.49
PHGDH-212ENST00000641247 FAM47AQ5JRC9 791 aa12□□□□□ -0.49
PHGDH-212ENST00000641247 FOXP4Q8IVH2 680 aaPredicted RBP12□□□□□ -0.49
PHGDH-212ENST00000641247 ACER1Q8TDN7 264 aa12□□□□□ -0.49
PHGDH-212ENST00000641247 TGFBRAP1Q8WUH2 860 aa12□□□□□ -0.49
PHGDH-212ENST00000641247 TIFAQ96CG3 184 aa12□□□□□ -0.49
PHGDH-212ENST00000641247 C12orf42Q96LP6 360 aa12□□□□□ -0.49
PHGDH-212ENST00000641247 PBX4Q9BYU1 374 aa12□□□□□ -0.49
PHGDH-212ENST00000641247 CWC22Q9HCG8 908 aaKnown RBP12□□□□□ -0.49
PHGDH-212ENST00000641247 COPRSQ9NQ92 184 aa12□□□□□ -0.49
PHGDH-212ENST00000641247 AATFQ9NY61 560 aaKnown RBP eCLIP12□□□□□ -0.49
PHGDH-212ENST00000641247 TACC3Q9Y6A5 838 aa12□□□□□ -0.49
PHGDH-212ENST00000641247 SPDYE16A6NNV3 312 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-212ENST00000641247 USP17L15C9J2P7 530 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 USP17L13C9JLJ4 530 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 USP17L11C9JVI0 530 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 USP17L18D6R9N7 530 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 USP17L22D6RA61 530 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 USP17L17D6RBQ6 530 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 USP17L19D6RCP7 530 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 USP17L20D6RJB6 530 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 KIAA0355O15063 1070 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 SEPT4O43236 478 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 MAP4K4O95819 1239 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-212ENST00000641247 GH2P01242 217 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 LDHCP07864 332 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 CLTBP09497 229 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 USP17L24Q0WX57 530 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 GTF3C2Q8WUA4 911 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-212ENST00000641247 SSH1Q8WYL5 1049 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.99□□□□□ -0.49
PHGDH-212ENST00000641247 DHX36Q9H2U1 1008 aaKnown RBP11.99□□□□□ -0.49
PHGDH-212ENST00000641247 RAI14Q9P0K7 980 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 SIPA1L1O43166 1804 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 FRMPD3Q5JV73 1810 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 CACNA1FO60840 1977 aa11.99□□□□□ -0.49
PHGDH-212ENST00000641247 RLFQ13129 1914 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 MYH13Q9UKX3 1938 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 FLT1P17948 1338 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 KBTBD13C9JR72 458 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 GLRX3O76003 335 aaKnown RBP11.98□□□□□ -0.49
PHGDH-212ENST00000641247 ADORA2AP29274 412 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 CCNA1P78396 465 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 MRPS5P82675 430 aaKnown RBP11.98□□□□□ -0.49
PHGDH-212ENST00000641247 HNRNPUQ00839 825 aaKnown RBP eCLIP11.98□□□□□ -0.49
PHGDH-212ENST00000641247 FAAP100Q0VG06 881 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 OLFML2BQ68BL8 750 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 LBX2Q6XYB7 198 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 SPATA5Q8NB90 893 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 MOV10L1Q9BXT6 1211 aaKnown RBP11.98□□□□□ -0.49
PHGDH-212ENST00000641247 EPHX3Q9H6B9 360 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 THEGQ9P2T0 379 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 SAP30BPQ9UHR5 308 aaKnown RBP11.98□□□□□ -0.49
PHGDH-212ENST00000641247 PHF24Q9UPV7 400 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 DNAH12Q6ZR08 3092 aa11.98□□□□□ -0.49
PHGDH-212ENST00000641247 PTPRCP08575 1304 aa11.97□□□□□ -0.49
PHGDH-212ENST00000641247 PQBP1O60828 265 aaKnown RBP11.97□□□□□ -0.49
PHGDH-212ENST00000641247 BMP1P13497 986 aa11.97□□□□□ -0.49
PHGDH-212ENST00000641247 RAG1P15918 1043 aa11.97□□□□□ -0.49
PHGDH-212ENST00000641247 VCAM1P19320 739 aa11.97□□□□□ -0.49
PHGDH-212ENST00000641247 MCAMP43121 646 aa11.97□□□□□ -0.49
PHGDH-212ENST00000641247 PPP4CP60510 307 aa11.97□□□□□ -0.49
PHGDH-212ENST00000641247 GSTO1P78417 241 aa11.97□□□□□ -0.49
PHGDH-212ENST00000641247 FPGSQ05932 587 aa11.97□□□□□ -0.49
PHGDH-212ENST00000641247 AKNAD1Q5T1N1 836 aa11.97□□□□□ -0.49
PHGDH-212ENST00000641247 DPP9Q86TI2 863 aa11.97□□□□□ -0.49
PHGDH-212ENST00000641247 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
PHGDH-212ENST00000641247 ATAD5Q96QE3 1844 aa11.96□□□□□ -0.49
PHGDH-212ENST00000641247 PGK1P00558 417 aa11.96□□□□□ -0.49
PHGDH-212ENST00000641247 TAL1P17542 331 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-212ENST00000641247 GUCY1A2P33402 732 aa11.96□□□□□ -0.49
PHGDH-212ENST00000641247 DYNLL1P63167 89 aaKnown RBP11.96□□□□□ -0.49
PHGDH-212ENST00000641247 TFF2Q03403 129 aa11.96□□□□□ -0.49
PHGDH-212ENST00000641247 RASIP1Q5U651 963 aa11.96□□□□□ -0.49
PHGDH-212ENST00000641247 TATDN1Q6P1N9 297 aa11.96□□□□□ -0.49
PHGDH-212ENST00000641247 CRACR2BQ8N4Y2 399 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-212ENST00000641247 LENG1Q96BZ8 264 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-212ENST00000641247 LRFN3Q9BTN0 628 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms