RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 CENPQQ7L2Z9 268 aaPredicted RBP17■□□□□ 0.31
SDHD-209ENST00000640554 OTOP1Q7RTM1 612 aa17■□□□□ 0.31
SDHD-209ENST00000640554 SLC44A5Q8NCS7 719 aa17■□□□□ 0.31
SDHD-209ENST00000640554 CD99L2Q8TCZ2 262 aa17■□□□□ 0.31
SDHD-209ENST00000640554 ARHGEF10LQ9HCE6 1279 aa17■□□□□ 0.31
SDHD-209ENST00000640554 EPB41L4AQ9HCS5 686 aaPredicted RBP17■□□□□ 0.31
SDHD-209ENST00000640554 DIAPH3Q9NSV4 1193 aa17■□□□□ 0.31
SDHD-209ENST00000640554 TRIM17Q9Y577 477 aa17■□□□□ 0.31
SDHD-209ENST00000640554 SIPA1L1O43166 1804 aa17■□□□□ 0.31
SDHD-209ENST00000640554 MYH7P12883 1935 aa17■□□□□ 0.31
SDHD-209ENST00000640554 CASP8AP2Q9UKL3 1982 aa16.99■□□□□ 0.31
SDHD-209ENST00000640554 PDE4AP27815 886 aa16.99■□□□□ 0.31
SDHD-209ENST00000640554 GUCY1A2P33402 732 aa16.99■□□□□ 0.31
SDHD-209ENST00000640554 IRX3P78415 501 aaPredicted RBP16.99■□□□□ 0.31
SDHD-209ENST00000640554 EVX2Q03828 476 aa16.99■□□□□ 0.31
SDHD-209ENST00000640554 SHROOM1Q2M3G4 852 aaPredicted RBP16.99■□□□□ 0.31
SDHD-209ENST00000640554 ZNF444Q8N0Y2 327 aaPredicted RBP16.99■□□□□ 0.31
SDHD-209ENST00000640554 EMILIN3Q9NT22 766 aa16.99■□□□□ 0.31
SDHD-209ENST00000640554 CPA4Q9UI42 421 aa16.99■□□□□ 0.31
SDHD-209ENST00000640554 DDX60LQ5H9U9 1706 aaKnown RBP16.99■□□□□ 0.31
SDHD-209ENST00000640554 USP17L15C9J2P7 530 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 USP17L13C9JLJ4 530 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 USP17L11C9JVI0 530 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 USP17L18D6R9N7 530 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 USP17L22D6RA61 530 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 USP17L17D6RBQ6 530 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 USP17L19D6RCP7 530 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 USP17L20D6RJB6 530 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 CENPBP07199 599 aaPredicted RBP16.98■□□□□ 0.31
SDHD-209ENST00000640554 AKR1B1P15121 316 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 USP17L24Q0WX57 530 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 NMIQ13287 307 aaPredicted RBP16.98■□□□□ 0.31
SDHD-209ENST00000640554 PPP4R3BQ5MIZ7 849 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 TTC22Q5TAA0 569 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 LPAR1Q92633 364 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 FAM227BQ96M60 508 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 ASCC2Q9H1I8 757 aaPredicted RBP16.98■□□□□ 0.31
SDHD-209ENST00000640554 ANAPC4Q9UJX5 808 aa16.98■□□□□ 0.31
SDHD-209ENST00000640554 ZMYM6O95789 1325 aa16.97■□□□□ 0.31
SDHD-209ENST00000640554 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
SDHD-209ENST00000640554 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
SDHD-209ENST00000640554 A0A0D9SFI3 127 aa16.97■□□□□ 0.31
SDHD-209ENST00000640554 RASA1P20936 1047 aa16.97■□□□□ 0.31
SDHD-209ENST00000640554 ICA1Q05084 483 aa16.97■□□□□ 0.31
SDHD-209ENST00000640554 PPARAQ07869 468 aa16.97■□□□□ 0.31
SDHD-209ENST00000640554 FAM110CQ1W6H9 321 aa16.97■□□□□ 0.31
SDHD-209ENST00000640554 ACER1Q8TDN7 264 aa16.97■□□□□ 0.31
SDHD-209ENST00000640554 PTPN22Q9Y2R2 807 aa16.97■□□□□ 0.31
SDHD-209ENST00000640554 TMX2Q9Y320 296 aa16.97■□□□□ 0.31
SDHD-209ENST00000640554 HSPD1P10809 573 aaKnown RBP16.96■□□□□ 0.31
SDHD-209ENST00000640554 PSMC4P43686 418 aa16.96■□□□□ 0.31
SDHD-209ENST00000640554 NT5C2P49902 561 aa16.96■□□□□ 0.31
SDHD-209ENST00000640554 CCDC129Q6ZRS4 1044 aa16.96■□□□□ 0.31
SDHD-209ENST00000640554 RUFY2Q8WXA3 655 aa16.96■□□□□ 0.31
SDHD-209ENST00000640554 SYNPO2Q9UMS6 1093 aa16.96■□□□□ 0.31
SDHD-209ENST00000640554 FMNL1O95466 1100 aaPredicted RBP16.95■□□□□ 0.3
SDHD-209ENST00000640554 FGAP02671 866 aa16.95■□□□□ 0.3
SDHD-209ENST00000640554 PCP11498 1178 aaKnown RBP16.95■□□□□ 0.3
SDHD-209ENST00000640554 FCGRTP55899 365 aa16.95■□□□□ 0.3
SDHD-209ENST00000640554 ERICH6BQ5W0A0 696 aa16.95■□□□□ 0.3
SDHD-209ENST00000640554 CATSPERGQ6ZRH7 1159 aa16.95■□□□□ 0.3
SDHD-209ENST00000640554 P2RX7Q99572 595 aaKnown RBP16.95■□□□□ 0.3
SDHD-209ENST00000640554 HOXC10Q9NYD6 342 aa16.95■□□□□ 0.3
SDHD-209ENST00000640554 NYAP2Q9P242 653 aa16.95■□□□□ 0.3
SDHD-209ENST00000640554 MORF4L1Q9UBU8 362 aa16.95■□□□□ 0.3
SDHD-209ENST00000640554 HPS5Q9UPZ3 1129 aa16.95■□□□□ 0.3
SDHD-209ENST00000640554 PHIPQ8WWQ0 1821 aa16.95■□□□□ 0.3
SDHD-209ENST00000640554 A0A1W2PRG0 241 aa16.94■□□□□ 0.3
SDHD-209ENST00000640554 SMIM22K7EJ46 135 aa16.94■□□□□ 0.3
SDHD-209ENST00000640554 FOXP2O15409 715 aa16.94■□□□□ 0.3
SDHD-209ENST00000640554 VCAM1P19320 739 aa16.94■□□□□ 0.3
SDHD-209ENST00000640554 HERVK_113P62684 666 aa16.94■□□□□ 0.3
SDHD-209ENST00000640554 VPS53Q5VIR6 699 aa16.94■□□□□ 0.3
SDHD-209ENST00000640554 CWC27Q6UX04 472 aaKnown RBP16.94■□□□□ 0.3
SDHD-209ENST00000640554 LBX2Q6XYB7 198 aa16.94■□□□□ 0.3
SDHD-209ENST00000640554 SIAH1Q8IUQ4 282 aa16.94■□□□□ 0.3
SDHD-209ENST00000640554 NEDD1Q8NHV4 660 aa16.94■□□□□ 0.3
SDHD-209ENST00000640554 VCPKMTQ9H867 229 aa16.94■□□□□ 0.3
SDHD-209ENST00000640554 GOPCQ9HD26 462 aa16.94■□□□□ 0.3
SDHD-209ENST00000640554 FGRP09769 529 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 EEF2P13639 858 aaKnown RBP16.93■□□□□ 0.3
SDHD-209ENST00000640554 GSPT1P15170 499 aaKnown RBP16.93■□□□□ 0.3
SDHD-209ENST00000640554 COG2Q14746 738 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 ZYXQ15942 572 aaKnown RBP16.93■□□□□ 0.3
SDHD-209ENST00000640554 NBPF11Q86T75 865 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 ZNF589Q86UQ0 364 aaPredicted RBP16.93■□□□□ 0.3
SDHD-209ENST00000640554 ANKRD13CQ8N6S4 541 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 GPRC5AQ8NFJ5 357 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 MKL1Q969V6 931 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 CCDC136Q96JN2 1154 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 TRIM47Q96LD4 638 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 SRRDQ9UH36 339 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 CTNNA3Q9UI47 895 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 RABGAP1Q9Y3P9 1069 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 RAD50Q92878 1312 aa16.93■□□□□ 0.3
SDHD-209ENST00000640554 ATAD5Q96QE3 1844 aa16.92■□□□□ 0.3
SDHD-209ENST00000640554 CCDC85CA6NKD9 419 aa16.92■□□□□ 0.3
SDHD-209ENST00000640554 WDR46O15213 610 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms