RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 ZNF579Q8NAF0 562 aaKnown RBP9.56□□□□□ -0.88
PNKP-231ENST00000640501 PNMA1Q8ND90 353 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 FBXW7Q969H0 707 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 ZNF622Q969S3 477 aaKnown RBP eCLIP9.56□□□□□ -0.88
PNKP-231ENST00000640501 TEKT1Q969V4 418 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 SENP2Q9HC62 589 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 MKRN1Q9UHC7 482 aaKnown RBP9.56□□□□□ -0.88
PNKP-231ENST00000640501 JAG2Q9Y219 1238 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 CLIC4Q9Y696 253 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 MYH1P12882 1939 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 FLT1P17948 1338 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 TRIM75PA6NK02 468 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 SMTNL1A8MU46 457 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 KIF28PB7ZC32 967 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 hCG_1984214I3L0E3 225 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 SCG2P13521 617 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 SMARCA1P28370 1054 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 CLCN1P35523 988 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 SYKP43405 635 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 HDLBPQ00341 1268 aaKnown RBP9.55□□□□□ -0.88
PNKP-231ENST00000640501 PLCB2Q00722 1185 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.55□□□□□ -0.88
PNKP-231ENST00000640501 MAPKAPK5Q8IW41 473 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 FMR1NBQ8N0W7 255 aaPredicted RBP9.55□□□□□ -0.88
PNKP-231ENST00000640501 CCDC82Q8N4S0 544 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 ZNF713Q8N859 430 aaPredicted RBP9.55□□□□□ -0.88
PNKP-231ENST00000640501 ENGASEQ8NFI3 743 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 FERMT2Q96AC1 680 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 MRIQ9BWK5 157 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 DACH1Q9UI36 760 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 MRVI1Q9Y6F6 885 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 DDX60LQ5H9U9 1706 aaKnown RBP9.55□□□□□ -0.88
PNKP-231ENST00000640501 CDK5RAP2Q96SN8 1893 aa9.55□□□□□ -0.88
PNKP-231ENST00000640501 MYH8P13535 1937 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 A0A1B0GVL5 298 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 BTBD18B2RXH4 712 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 RIMBP2O15034 1052 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 ZNF202O95125 648 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 ADCY5O95622 1261 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 TOP1P11387 765 aaKnown RBP9.54□□□□□ -0.88
PNKP-231ENST00000640501 NLRP5P59047 1200 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 SNW1Q13573 536 aaKnown RBP9.54□□□□□ -0.88
PNKP-231ENST00000640501 GRM4Q14833 912 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 SLC15A2Q16348 729 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 PFKFB3Q16875 520 aaPredicted RBP9.54□□□□□ -0.88
PNKP-231ENST00000640501 FAM47AQ5JRC9 791 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 RESP18Q5W5W9 173 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 NEDD1Q8NHV4 660 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 BPIFA3Q9BQP9 254 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 PHF20Q9BVI0 1012 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 TRIM34Q9BYJ4 488 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 DHX36Q9H2U1 1008 aaKnown RBP9.54□□□□□ -0.88
PNKP-231ENST00000640501 SEC63Q9UGP8 760 aaKnown RBP9.54□□□□□ -0.88
PNKP-231ENST00000640501 STX8Q9UNK0 236 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 TTF2Q9UNY4 1162 aaKnown RBP9.54□□□□□ -0.88
PNKP-231ENST00000640501 TACC3Q9Y6A5 838 aa9.54□□□□□ -0.88
PNKP-231ENST00000640501 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
PNKP-231ENST00000640501 COL11A2P13942 1736 aaPredicted RBP9.53□□□□□ -0.88
PNKP-231ENST00000640501 FAM237AA0A1B0GTK4 181 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 MYO1BO43795 1136 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 PARP1P09874 1014 aaKnown RBP9.53□□□□□ -0.88
PNKP-231ENST00000640501 CYP2D6P10635 497 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 PFKFB1P16118 471 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 TXLNAP40222 546 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 BAG6P46379 1132 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 CDK8P49336 464 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 NDUFA8P51970 172 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 STRIP1Q5VSL9 837 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 OLFM4Q6UX06 510 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 AIFM3Q96NN9 605 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 FTOQ9C0B1 505 aaKnown RBP eCLIP9.53□□□□□ -0.88
PNKP-231ENST00000640501 GOLPH3LQ9H4A5 285 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 KIAA1468Q9P260 1216 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 KCNJ14Q9UNX9 436 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 ZKSCAN5Q9Y2L8 839 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 SRPRBQ9Y5M8 271 aaKnown RBP9.53□□□□□ -0.88
PNKP-231ENST00000640501 C10orf71Q711Q0 1435 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 CNTNAP5Q8WYK1 1306 aa9.53□□□□□ -0.88
PNKP-231ENST00000640501 PLIN4Q96Q06 1357 aa9.52□□□□□ -0.88
PNKP-231ENST00000640501 NRDCO43847 1150 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 SMC2O95347 1197 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 RASA1P20936 1047 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 MARCKSP29966 332 aaPredicted RBP9.52□□□□□ -0.89
PNKP-231ENST00000640501 GNA11P29992 359 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 RHBDL3P58872 404 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 PTPAQ15257 358 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 AXDND1Q5T1B0 1012 aaPredicted RBP9.52□□□□□ -0.89
PNKP-231ENST00000640501 SOGA3Q5TF21 947 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 DRC7Q8IY82 874 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 CNNM3Q8NE01 707 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 SLC16A10Q8TF71 515 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 RRP36Q96EU6 259 aaKnown RBP9.52□□□□□ -0.89
PNKP-231ENST00000640501 CCDC17Q96LX7 622 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 GPR101Q96P66 508 aaPredicted RBP9.52□□□□□ -0.89
PNKP-231ENST00000640501 SPZ1Q9BXG8 430 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 TRIM5Q9C035 493 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 EHD4Q9H223 541 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 VPS33BQ9H267 617 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 CBX8Q9HC52 389 aa9.52□□□□□ -0.89
PNKP-231ENST00000640501 CABP5Q9NP86 173 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms