RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 CNMDO75829 334 aa19.76■□□□□ 0.75
COLCA2-207ENST00000639470 VCAM1P19320 739 aa19.76■□□□□ 0.75
COLCA2-207ENST00000639470 GCLCP48506 637 aaPredicted RBP19.76■□□□□ 0.75
COLCA2-207ENST00000639470 PABPC4Q13310 644 aaKnown RBP eCLIP19.76■□□□□ 0.75
COLCA2-207ENST00000639470 OSBP2Q969R2 916 aa19.76■□□□□ 0.75
COLCA2-207ENST00000639470 RNF208Q9H0X6 261 aa19.76■□□□□ 0.75
COLCA2-207ENST00000639470 GINM1Q9NU53 330 aa19.76■□□□□ 0.75
COLCA2-207ENST00000639470 MORF4L1Q9UBU8 362 aa19.76■□□□□ 0.75
COLCA2-207ENST00000639470 GJD2Q9UKL4 321 aa19.76■□□□□ 0.75
COLCA2-207ENST00000639470 SLC4A4Q9Y6R1 1079 aa19.76■□□□□ 0.75
COLCA2-207ENST00000639470 UBE3CQ15386 1083 aa19.75■□□□□ 0.75
COLCA2-207ENST00000639470 TMED8Q6PL24 325 aaPredicted RBP19.75■□□□□ 0.75
COLCA2-207ENST00000639470 SIAH1Q8IUQ4 282 aa19.75■□□□□ 0.75
COLCA2-207ENST00000639470 SLAIN1Q8ND83 568 aa19.75■□□□□ 0.75
COLCA2-207ENST00000639470 COA7Q96BR5 231 aa19.75■□□□□ 0.75
COLCA2-207ENST00000639470 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.75■□□□□ 0.75
COLCA2-207ENST00000639470 M0R2C6 588 aa19.74■□□□□ 0.75
COLCA2-207ENST00000639470 C12orf60Q5U649 245 aa19.74■□□□□ 0.75
COLCA2-207ENST00000639470 CTR9Q6PD62 1173 aa19.74■□□□□ 0.75
COLCA2-207ENST00000639470 KBTBD3Q8NAB2 608 aa19.74■□□□□ 0.75
COLCA2-207ENST00000639470 C12orf42Q96LP6 360 aa19.74■□□□□ 0.75
COLCA2-207ENST00000639470 KIAA1683Q9H0B3 1180 aa19.74■□□□□ 0.75
COLCA2-207ENST00000639470 CABP5Q9NP86 173 aa19.74■□□□□ 0.75
COLCA2-207ENST00000639470 IRF5Q13568 498 aa19.73■□□□□ 0.75
COLCA2-207ENST00000639470 PI4K2BQ8TCG2 481 aa19.73■□□□□ 0.75
COLCA2-207ENST00000639470 SEC62Q99442 399 aaKnown RBP19.73■□□□□ 0.75
COLCA2-207ENST00000639470 RPAP3Q9H6T3 665 aaPredicted RBP19.73■□□□□ 0.75
COLCA2-207ENST00000639470 CYP2B6P20813 491 aa19.72■□□□□ 0.75
COLCA2-207ENST00000639470 CDK8P49336 464 aa19.72■□□□□ 0.75
COLCA2-207ENST00000639470 ERVK-9P63128 1117 aa19.72■□□□□ 0.75
COLCA2-207ENST00000639470 ERVK-24P63145 666 aa19.72■□□□□ 0.75
COLCA2-207ENST00000639470 CATSPERGQ6ZRH7 1159 aa19.72■□□□□ 0.75
COLCA2-207ENST00000639470 DOCK3Q8IZD9 2030 aa19.72■□□□□ 0.75
COLCA2-207ENST00000639470 GPRC5AQ8NFJ5 357 aa19.72■□□□□ 0.75
COLCA2-207ENST00000639470 U2AF1L4Q8WU68 220 aaKnown RBP19.72■□□□□ 0.75
COLCA2-207ENST00000639470 STRBPQ96SI9 672 aaKnown RBP19.72■□□□□ 0.75
COLCA2-207ENST00000639470 EPB41L4AQ9HCS5 686 aaPredicted RBP19.72■□□□□ 0.75
COLCA2-207ENST00000639470 ATP8A2Q9NTI2 1148 aa19.72■□□□□ 0.75
COLCA2-207ENST00000639470 BTBD7Q9P203 1132 aa19.72■□□□□ 0.75
COLCA2-207ENST00000639470 BAZ2AQ9UIF9 1905 aaKnown RBP19.71■□□□□ 0.75
COLCA2-207ENST00000639470 GSG1L2A8MUP6 293 aa19.71■□□□□ 0.75
COLCA2-207ENST00000639470 GJB1P08034 283 aa19.71■□□□□ 0.75
COLCA2-207ENST00000639470 GJA8P48165 433 aa19.71■□□□□ 0.75
COLCA2-207ENST00000639470 UBXN2AP68543 259 aa19.71■□□□□ 0.75
COLCA2-207ENST00000639470 CCL14Q16627 93 aa19.71■□□□□ 0.75
COLCA2-207ENST00000639470 SPICE1Q8N0Z3 855 aa19.71■□□□□ 0.75
COLCA2-207ENST00000639470 TRIB2Q92519 343 aa19.71■□□□□ 0.75
COLCA2-207ENST00000639470 DEFB118Q96PH6 123 aa19.71■□□□□ 0.75
COLCA2-207ENST00000639470 PLXNB2O15031 1838 aa19.7■□□□□ 0.74
COLCA2-207ENST00000639470 SPDYE16A6NNV3 312 aaPredicted RBP19.7■□□□□ 0.74
COLCA2-207ENST00000639470 USP17L15C9J2P7 530 aa19.7■□□□□ 0.74
COLCA2-207ENST00000639470 USP17L13C9JLJ4 530 aa19.7■□□□□ 0.74
COLCA2-207ENST00000639470 USP17L11C9JVI0 530 aa19.7■□□□□ 0.74
COLCA2-207ENST00000639470 USP17L18D6R9N7 530 aa19.7■□□□□ 0.74
COLCA2-207ENST00000639470 USP17L22D6RA61 530 aa19.7■□□□□ 0.74
COLCA2-207ENST00000639470 USP17L17D6RBQ6 530 aa19.7■□□□□ 0.74
COLCA2-207ENST00000639470 USP17L19D6RCP7 530 aa19.7■□□□□ 0.74
COLCA2-207ENST00000639470 USP17L20D6RJB6 530 aa19.7■□□□□ 0.74
COLCA2-207ENST00000639470 USP17L24Q0WX57 530 aa19.7■□□□□ 0.74
COLCA2-207ENST00000639470 PXYLP1Q8TE99 480 aa19.7■□□□□ 0.74
COLCA2-207ENST00000639470 RNF113AO15541 343 aaKnown RBP19.69■□□□□ 0.74
COLCA2-207ENST00000639470 SAMD1Q6SPF0 538 aaPredicted RBP19.69■□□□□ 0.74
COLCA2-207ENST00000639470 C16orf86Q6ZW13 317 aa19.69■□□□□ 0.74
COLCA2-207ENST00000639470 GPR142Q7Z601 462 aa19.69■□□□□ 0.74
COLCA2-207ENST00000639470 UBE2Q1Q7Z7E8 422 aa19.69■□□□□ 0.74
COLCA2-207ENST00000639470 APPBP2Q92624 585 aa19.69■□□□□ 0.74
COLCA2-207ENST00000639470 GPATCH3Q96I76 525 aa19.69■□□□□ 0.74
COLCA2-207ENST00000639470 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.69■□□□□ 0.74
COLCA2-207ENST00000639470 SALL3Q9BXA9 1300 aa19.69■□□□□ 0.74
COLCA2-207ENST00000639470 GPAA1O43292 621 aa19.68■□□□□ 0.74
COLCA2-207ENST00000639470 ICA1Q05084 483 aa19.68■□□□□ 0.74
COLCA2-207ENST00000639470 ZSCAN25Q6NSZ9 544 aa19.68■□□□□ 0.74
COLCA2-207ENST00000639470 TMEM179Q6ZVK1 233 aa19.68■□□□□ 0.74
COLCA2-207ENST00000639470 DIS3LQ8TF46 1054 aaKnown RBP19.68■□□□□ 0.74
COLCA2-207ENST00000639470 PCDH10Q9P2E7 1040 aa19.68■□□□□ 0.74
COLCA2-207ENST00000639470 SWAP70Q9UH65 585 aa19.68■□□□□ 0.74
COLCA2-207ENST00000639470 SGPL1O95470 568 aa19.67■□□□□ 0.74
COLCA2-207ENST00000639470 USP14P54578 494 aa19.67■□□□□ 0.74
COLCA2-207ENST00000639470 ATP2B2Q01814 1243 aa19.67■□□□□ 0.74
COLCA2-207ENST00000639470 ANKRD45Q5TZF3 282 aa19.67■□□□□ 0.74
COLCA2-207ENST00000639470 CCDC129Q6ZRS4 1044 aa19.67■□□□□ 0.74
COLCA2-207ENST00000639470 USP6NLQ92738 828 aa19.67■□□□□ 0.74
COLCA2-207ENST00000639470 TANGO6Q9C0B7 1094 aa19.67■□□□□ 0.74
COLCA2-207ENST00000639470 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.67■□□□□ 0.748e-6■□□□□ 10.8
COLCA2-207ENST00000639470 PAK6Q9NQU5 681 aaPredicted RBP19.67■□□□□ 0.74
COLCA2-207ENST00000639470 MINDY4BA8MYZ0 360 aa19.66■□□□□ 0.74
COLCA2-207ENST00000639470 HMGCRP04035 888 aa19.66■□□□□ 0.74
COLCA2-207ENST00000639470 EEF2P13639 858 aaKnown RBP19.66■□□□□ 0.74
COLCA2-207ENST00000639470 MX1P20591 662 aa19.66■□□□□ 0.74
COLCA2-207ENST00000639470 MORN1Q5T089 497 aa19.66■□□□□ 0.74
COLCA2-207ENST00000639470 WDR78Q5VTH9 848 aa19.66■□□□□ 0.74
COLCA2-207ENST00000639470 FLRT1Q9NZU1 646 aa19.66■□□□□ 0.74
COLCA2-207ENST00000639470 RABGAP1Q9Y3P9 1069 aa19.66■□□□□ 0.74
COLCA2-207ENST00000639470 MYH7P12883 1935 aa19.66■□□□□ 0.74
COLCA2-207ENST00000639470 H0YGN5 161 aa19.65■□□□□ 0.74
COLCA2-207ENST00000639470 PRDM1O75626 825 aa19.65■□□□□ 0.74
COLCA2-207ENST00000639470 FARP2O94887 1054 aaPredicted RBP19.65■□□□□ 0.74
COLCA2-207ENST00000639470 RASA1P20936 1047 aa19.65■□□□□ 0.74
COLCA2-207ENST00000639470 PLEKHH3Q7Z736 793 aa19.65■□□□□ 0.74
COLCA2-207ENST00000639470 ATG4CQ96DT6 458 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms