RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 RGS22Q8NE09 1264 aa25.19■■□□□ 1.62
SCARB2-212ENST00000638663 PRMT6Q96LA8 375 aaPredicted RBP25.19■■□□□ 1.62
SCARB2-212ENST00000638663 FUT2Q10981 343 aa25.18■■□□□ 1.62
SCARB2-212ENST00000638663 TMTC3Q6ZXV5 915 aa25.18■■□□□ 1.62
SCARB2-212ENST00000638663 FER1L6Q2WGJ9 1857 aa25.18■■□□□ 1.62
SCARB2-212ENST00000638663 KIF28PB7ZC32 967 aa25.18■■□□□ 1.62
SCARB2-212ENST00000638663 KIF23Q02241 960 aaPredicted RBP25.18■■□□□ 1.62
SCARB2-212ENST00000638663 LEO1Q8WVC0 666 aaPredicted RBP25.18■■□□□ 1.62
SCARB2-212ENST00000638663 TMEM47Q9BQJ4 181 aa25.18■■□□□ 1.62
SCARB2-212ENST00000638663 RNF26Q9BY78 433 aaPredicted RBP25.18■■□□□ 1.62
SCARB2-212ENST00000638663 AKAP17AQ02040 695 aaKnown RBP25.17■■□□□ 1.62
SCARB2-212ENST00000638663 SWAP70Q9UH65 585 aa25.17■■□□□ 1.62
SCARB2-212ENST00000638663 HDAC9Q9UKV0 1011 aa25.17■■□□□ 1.62
SCARB2-212ENST00000638663 CFAP45Q9UL16 551 aa25.17■■□□□ 1.62
SCARB2-212ENST00000638663 ELP1O95163 1332 aa25.16■■□□□ 1.62
SCARB2-212ENST00000638663 CEBPZQ03701 1054 aaKnown RBP25.16■■□□□ 1.62
SCARB2-212ENST00000638663 CXCL9Q07325 125 aa25.16■■□□□ 1.62
SCARB2-212ENST00000638663 NLGN2Q8NFZ4 835 aa25.16■■□□□ 1.62
SCARB2-212ENST00000638663 JDP2Q8WYK2 163 aa25.16■■□□□ 1.62
SCARB2-212ENST00000638663 CEP95Q96GE4 821 aa25.16■■□□□ 1.62
SCARB2-212ENST00000638663 TMEM63CQ9P1W3 806 aa25.16■■□□□ 1.62
SCARB2-212ENST00000638663 MYH15Q9Y2K3 1946 aa25.16■■□□□ 1.62
SCARB2-212ENST00000638663 DDTLA6NHG4 134 aaPredicted RBP25.16■■□□□ 1.62
SCARB2-212ENST00000638663 ZSCAN29Q8IWY8 852 aaPredicted RBP25.16■■□□□ 1.62
SCARB2-212ENST00000638663 OGFOD1Q8N543 542 aa25.16■■□□□ 1.62
SCARB2-212ENST00000638663 SRBD1Q8N5C6 995 aaKnown RBP25.16■■□□□ 1.62
SCARB2-212ENST00000638663 ZNF396Q96N95 335 aaPredicted RBP25.16■■□□□ 1.62
SCARB2-212ENST00000638663 FTOQ9C0B1 505 aaKnown RBP eCLIP25.16■■□□□ 1.62
SCARB2-212ENST00000638663 DHX36Q9H2U1 1008 aaKnown RBP25.16■■□□□ 1.62
SCARB2-212ENST00000638663 hCG_1642624A0A1W2PR95 340 aa25.15■■□□□ 1.62
SCARB2-212ENST00000638663 NPM3O75607 178 aaKnown RBP25.15■■□□□ 1.62
SCARB2-212ENST00000638663 SLURP2P0DP57 97 aa25.15■■□□□ 1.62
SCARB2-212ENST00000638663 AKR1B1P15121 316 aa25.15■■□□□ 1.62
SCARB2-212ENST00000638663 KIF5BP33176 963 aa25.15■■□□□ 1.62
SCARB2-212ENST00000638663 SHMT1P34896 483 aa25.15■■□□□ 1.62
SCARB2-212ENST00000638663 SH3BP5LQ7L8J4 393 aa25.15■■□□□ 1.62
SCARB2-212ENST00000638663 BRAPQ7Z569 592 aa25.15■■□□□ 1.62
SCARB2-212ENST00000638663 USP28Q96RU2 1077 aa25.15■■□□□ 1.62
SCARB2-212ENST00000638663 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.15■■□□□ 1.62
SCARB2-212ENST00000638663 EHD4Q9H223 541 aa25.15■■□□□ 1.62
SCARB2-212ENST00000638663 MTMR7Q9Y216 660 aa25.15■■□□□ 1.62
SCARB2-212ENST00000638663 V9GY48 417 aaPredicted RBP25.15■■□□□ 1.62
SCARB2-212ENST00000638663 SPDYE2BA6NHP3 402 aa25.14■■□□□ 1.62
SCARB2-212ENST00000638663 PRPF3O43395 683 aaKnown RBP25.14■■□□□ 1.62
SCARB2-212ENST00000638663 SPDYE6P0CI01 402 aa25.14■■□□□ 1.62
SCARB2-212ENST00000638663 PLIN4Q96Q06 1357 aa25.14■■□□□ 1.61
SCARB2-212ENST00000638663 CNTNAP5Q8WYK1 1306 aa25.14■■□□□ 1.61
SCARB2-212ENST00000638663 DLGAP5Q15398 846 aa25.14■■□□□ 1.61
SCARB2-212ENST00000638663 ATL3Q6DD88 541 aa25.14■■□□□ 1.61
SCARB2-212ENST00000638663 AGBL3Q8NEM8 1001 aa25.14■■□□□ 1.61
SCARB2-212ENST00000638663 GNL2Q13823 731 aaKnown RBP25.13■■□□□ 1.61
SCARB2-212ENST00000638663 GRM4Q14833 912 aa25.13■■□□□ 1.61
SCARB2-212ENST00000638663 PKN1Q16512 942 aa25.13■■□□□ 1.61
SCARB2-212ENST00000638663 ZSCAN23Q3MJ62 389 aa25.13■■□□□ 1.61
SCARB2-212ENST00000638663 CIAPIN1Q6FI81 312 aa25.13■■□□□ 1.61
SCARB2-212ENST00000638663 MAP3K14Q99558 947 aa25.13■■□□□ 1.61
SCARB2-212ENST00000638663 KCNJ14Q9UNX9 436 aa25.13■■□□□ 1.61
SCARB2-212ENST00000638663 MYH8P13535 1937 aa25.12■■□□□ 1.61
SCARB2-212ENST00000638663 DNAJC18Q9H819 358 aa25.12■■□□□ 1.61
SCARB2-212ENST00000638663 PI4KBQ9UBF8 816 aa25.12■■□□□ 1.61
SCARB2-212ENST00000638663 FAM196BA6NMK8 535 aa25.12■■□□□ 1.61
SCARB2-212ENST00000638663 RASSF7Q02833 373 aa25.12■■□□□ 1.61
SCARB2-212ENST00000638663 MYSM1Q5VVJ2 828 aa25.12■■□□□ 1.61
SCARB2-212ENST00000638663 STAG2Q8N3U4 1231 aa25.12■■□□□ 1.61
SCARB2-212ENST00000638663 TMOD2Q9NZR1 351 aa25.12■■□□□ 1.61
SCARB2-212ENST00000638663 MYH6P13533 1939 aa25.12■■□□□ 1.61
SCARB2-212ENST00000638663 CLRN2A0PK11 232 aa25.11■■□□□ 1.61
SCARB2-212ENST00000638663 ENTPD3O75355 529 aa25.11■■□□□ 1.61
SCARB2-212ENST00000638663 MMP1P03956 469 aa25.11■■□□□ 1.61
SCARB2-212ENST00000638663 TOP1P11387 765 aaKnown RBP25.11■■□□□ 1.61
SCARB2-212ENST00000638663 MTMR4Q9NYA4 1195 aa25.11■■□□□ 1.61
SCARB2-212ENST00000638663 MAD2L2Q9UI95 211 aa25.11■■□□□ 1.61
SCARB2-212ENST00000638663 SIPA1L1O43166 1804 aa25.1■■□□□ 1.61
SCARB2-212ENST00000638663 NOVP48745 357 aa25.1■■□□□ 1.61
SCARB2-212ENST00000638663 RCOR1Q9UKL0 485 aa25.1■■□□□ 1.61
SCARB2-212ENST00000638663 IGKV6D-41A0A0C4DH26 115 aa25.1■■□□□ 1.61
SCARB2-212ENST00000638663 GOLGA6L4A6NEF3 574 aa25.1■■□□□ 1.61
SCARB2-212ENST00000638663 PIBF1Q8WXW3 757 aa25.1■■□□□ 1.61
SCARB2-212ENST00000638663 ZNF70Q9UC06 446 aaPredicted RBP25.1■■□□□ 1.61
SCARB2-212ENST00000638663 TCP10L2B9ZVM9 353 aa25.09■■□□□ 1.61
SCARB2-212ENST00000638663 MPHOSPH10O00566 681 aaKnown RBP25.09■■□□□ 1.61
SCARB2-212ENST00000638663 U2AF2P26368 475 aaKnown RBP eCLIP25.09■■□□□ 1.61
SCARB2-212ENST00000638663 EIF6P56537 245 aaKnown RBP25.09■■□□□ 1.61
SCARB2-212ENST00000638663 SAFBQ15424 915 aaKnown RBP eCLIP25.09■■□□□ 1.61
SCARB2-212ENST00000638663 RASGRP2Q7LDG7 609 aa25.09■■□□□ 1.61
SCARB2-212ENST00000638663 CLEC10AQ8IUN9 316 aa25.09■■□□□ 1.61
SCARB2-212ENST00000638663 SYAP1Q96A49 352 aaPredicted RBP25.09■■□□□ 1.61
SCARB2-212ENST00000638663 TRIM34Q9BYJ4 488 aa25.09■■□□□ 1.61
SCARB2-212ENST00000638663 VPS54Q9P1Q0 977 aa25.09■■□□□ 1.61
SCARB2-212ENST00000638663 LTBP3Q9NS15 1303 aa25.09■■□□□ 1.61
SCARB2-212ENST00000638663 GNAQP50148 359 aa25.08■■□□□ 1.61
SCARB2-212ENST00000638663 DIS3L2Q8IYB7 885 aaKnown RBP25.08■■□□□ 1.61
SCARB2-212ENST00000638663 SHISA4Q96DD7 197 aa25.08■■□□□ 1.61
SCARB2-212ENST00000638663 PGBD1Q96JS3 809 aa25.08■■□□□ 1.61
SCARB2-212ENST00000638663 SPON1Q9HCB6 807 aa25.08■■□□□ 1.61
SCARB2-212ENST00000638663 ATRNL1Q5VV63 1379 aa25.08■■□□□ 1.6
SCARB2-212ENST00000638663 GOLGA6L3A6NEY3 463 aa25.08■■□□□ 1.6
SCARB2-212ENST00000638663 BTBD18B2RXH4 712 aa25.08■■□□□ 1.6
SCARB2-212ENST00000638663 XBP1P17861 261 aa25.08■■□□□ 1.6
SCARB2-212ENST00000638663 TNIP1Q15025 636 aa25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms