RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 ZSCAN10Q96SZ4 725 aaPredicted RBP18.63■□□□□ 0.57
SCARB2-210ENST00000638567 FAM207AQ9NSI2 230 aaPredicted RBP18.63■□□□□ 0.57
SCARB2-210ENST00000638567 BRD3Q15059 726 aa18.62■□□□□ 0.57
SCARB2-210ENST00000638567 UTP14CQ5TAP6 766 aaKnown RBP18.62■□□□□ 0.57
SCARB2-210ENST00000638567 HS2ST1Q7LGA3 356 aa18.62■□□□□ 0.57
SCARB2-210ENST00000638567 CCDC155Q8N6L0 562 aa18.62■□□□□ 0.57
SCARB2-210ENST00000638567 GRAMD1CQ8IYS0 662 aa18.62■□□□□ 0.57
SCARB2-210ENST00000638567 ARFGAP2Q8N6H7 521 aa18.62■□□□□ 0.57
SCARB2-210ENST00000638567 ZNF622Q969S3 477 aaKnown RBP eCLIP18.62■□□□□ 0.57
SCARB2-210ENST00000638567 ZC3H12CQ9C0D7 883 aaKnown RBP18.62■□□□□ 0.57
SCARB2-210ENST00000638567 A2ML1A8K2U0 1454 aa18.62■□□□□ 0.57
SCARB2-210ENST00000638567 MRPL12P52815 198 aaKnown RBP18.62■□□□□ 0.57
SCARB2-210ENST00000638567 PTGDRQ13258 359 aa18.62■□□□□ 0.57
SCARB2-210ENST00000638567 MORC3Q14149 939 aa18.62■□□□□ 0.57
SCARB2-210ENST00000638567 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.62■□□□□ 0.57
SCARB2-210ENST00000638567 CSRNP2Q9H175 543 aa18.62■□□□□ 0.57
SCARB2-210ENST00000638567 SETBP1Q9Y6X0 1596 aa18.62■□□□□ 0.57
SCARB2-210ENST00000638567 COBLO75128 1261 aa18.61■□□□□ 0.57
SCARB2-210ENST00000638567 CABP7Q86V35 215 aa18.61■□□□□ 0.57
SCARB2-210ENST00000638567 SYMPKQ92797 1274 aaKnown RBP18.61■□□□□ 0.57
SCARB2-210ENST00000638567 SAR1BQ9Y6B6 198 aa18.61■□□□□ 0.57
SCARB2-210ENST00000638567 GOLGA6CA6NDK9 693 aa18.61■□□□□ 0.57
SCARB2-210ENST00000638567 GOLGA6DP0CG33 693 aa18.61■□□□□ 0.57
SCARB2-210ENST00000638567 NR5A1Q13285 461 aa18.61■□□□□ 0.57
SCARB2-210ENST00000638567 SNX29Q8TEQ0 813 aa18.61■□□□□ 0.57
SCARB2-210ENST00000638567 GOLGA6AQ9NYA3 693 aa18.61■□□□□ 0.57
SCARB2-210ENST00000638567 UBE4AQ14139 1066 aa18.61■□□□□ 0.57
SCARB2-210ENST00000638567 CCDC174Q6PII3 467 aa18.61■□□□□ 0.57
SCARB2-210ENST00000638567 UIMC1Q96RL1 719 aa18.61■□□□□ 0.57
SCARB2-210ENST00000638567 GNPATO15228 680 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 TTC31Q49AM3 519 aaPredicted RBP18.6■□□□□ 0.57
SCARB2-210ENST00000638567 SND1Q7KZF4 910 aaKnown RBP eCLIP18.6■□□□□ 0.57
SCARB2-210ENST00000638567 ASAP1Q9ULH1 1129 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 SMIM23A6NLE4 172 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 FAM13AO94988 1023 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 DDIT3P35638 169 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 DMTNQ08495 405 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 ZSCAN26Q16670 478 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 KRT25Q7Z3Z0 450 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 ALKQ9UM73 1620 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 GOLGA6BA6NDN3 693 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 RIMBP2O15034 1052 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 CTNNA2P26232 953 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 ADD2P35612 726 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 GTF2A1P52655 376 aaPredicted RBP18.6■□□□□ 0.57
SCARB2-210ENST00000638567 GIGYF2Q6Y7W6 1299 aaKnown RBP18.6■□□□□ 0.57
SCARB2-210ENST00000638567 SMYD4Q8IYR2 804 aaPredicted RBP18.6■□□□□ 0.57
SCARB2-210ENST00000638567 IL25Q9H293 177 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 ATP10DQ9P241 1426 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 CASP14P31944 242 aa18.6■□□□□ 0.57
SCARB2-210ENST00000638567 TMEM110-MUSTN1A8MSY1 372 aa18.59■□□□□ 0.57
SCARB2-210ENST00000638567 SEC31AO94979 1220 aaKnown RBP18.59■□□□□ 0.57
SCARB2-210ENST00000638567 TYW1BQ6NUM6 668 aa18.59■□□□□ 0.57
SCARB2-210ENST00000638567 MAPKAPK5Q8IW41 473 aa18.59■□□□□ 0.57
SCARB2-210ENST00000638567 NOX5Q96PH1 765 aa18.59■□□□□ 0.57
SCARB2-210ENST00000638567 MAP3K15Q6ZN16 1313 aa18.59■□□□□ 0.57
SCARB2-210ENST00000638567 CCDC144BQ3MJ40 725 aa18.59■□□□□ 0.57
SCARB2-210ENST00000638567 C2CD5Q86YS7 1000 aa18.59■□□□□ 0.57
SCARB2-210ENST00000638567 PLVAPQ9BX97 442 aa18.59■□□□□ 0.57
SCARB2-210ENST00000638567 NDUFAB1O14561 156 aa18.59■□□□□ 0.57
SCARB2-210ENST00000638567 HPDP32754 393 aaPredicted RBP18.59■□□□□ 0.57
SCARB2-210ENST00000638567 NCBP1Q09161 790 aaKnown RBP18.59■□□□□ 0.57
SCARB2-210ENST00000638567 BLIDQ8IZY5 108 aa18.59■□□□□ 0.57
SCARB2-210ENST00000638567 IFIH1Q9BYX4 1025 aaKnown RBP18.59■□□□□ 0.57
SCARB2-210ENST00000638567 NLRC4Q9NPP4 1024 aa18.59■□□□□ 0.57
SCARB2-210ENST00000638567 NAA30Q147X3 362 aaPredicted RBP18.58■□□□□ 0.57
SCARB2-210ENST00000638567 WHAMMP3Q1A5X7 153 aa18.58■□□□□ 0.57
SCARB2-210ENST00000638567 SLC9C1Q4G0N8 1177 aa18.58■□□□□ 0.57
SCARB2-210ENST00000638567 HERC4Q5GLZ8 1057 aaPredicted RBP18.58■□□□□ 0.57
SCARB2-210ENST00000638567 SARM1Q6SZW1 724 aa18.58■□□□□ 0.57
SCARB2-210ENST00000638567 RAD51AP2Q09MP3 1159 aa18.58■□□□□ 0.57
SCARB2-210ENST00000638567 ZRSR2Q15696 482 aaKnown RBP18.58■□□□□ 0.57
SCARB2-210ENST00000638567 NBPF14Q5TI25 921 aa18.58■□□□□ 0.57
SCARB2-210ENST00000638567 CCDC84Q86UT8 332 aaPredicted RBP18.58■□□□□ 0.57
SCARB2-210ENST00000638567 HOOK3Q86VS8 718 aa18.58■□□□□ 0.57
SCARB2-210ENST00000638567 FCHSD1Q86WN1 690 aa18.58■□□□□ 0.57
SCARB2-210ENST00000638567 TBC1D7Q9P0N9 293 aa18.58■□□□□ 0.57
SCARB2-210ENST00000638567 INF2Q27J81 1249 aa18.58■□□□□ 0.56
SCARB2-210ENST00000638567 FOXP1Q9H334 677 aaPredicted RBP18.58■□□□□ 0.56
SCARB2-210ENST00000638567 RASAL2Q9UJF2 1139 aa18.58■□□□□ 0.56
SCARB2-210ENST00000638567 SCG2P13521 617 aa18.58■□□□□ 0.56
SCARB2-210ENST00000638567 PRPHP41219 470 aa18.58■□□□□ 0.56
SCARB2-210ENST00000638567 PPARDQ03181 441 aa18.58■□□□□ 0.56
SCARB2-210ENST00000638567 RRAGAQ7L523 313 aa18.58■□□□□ 0.56
SCARB2-210ENST00000638567 CPLX4Q7Z7G2 160 aa18.58■□□□□ 0.56
SCARB2-210ENST00000638567 GOLPH3LQ9H4A5 285 aa18.58■□□□□ 0.56
SCARB2-210ENST00000638567 SH2B2O14492 632 aaPredicted RBP18.57■□□□□ 0.56
SCARB2-210ENST00000638567 CETN3O15182 167 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 PRKAB2O43741 272 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 RPL13P26373 211 aaKnown RBP18.57■□□□□ 0.56
SCARB2-210ENST00000638567 ERCC5P28715 1186 aaPredicted RBP18.57■□□□□ 0.56
SCARB2-210ENST00000638567 PLS1Q14651 629 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 FBXO38Q6PIJ6 1188 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 WDR66Q8TBY9 1149 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 RABGGTAQ92696 567 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 SELENOSQ9BQE4 189 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 SAMSN1Q9NSI8 373 aaKnown RBP18.57■□□□□ 0.56
SCARB2-210ENST00000638567 ZSWIM5Q9P217 1185 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 CCDC121Q6ZUS5 278 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 UBLCP1Q8WVY7 318 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms