RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 RTN1Q16799 776 aa9.9□□□□□ -0.82
NECAP1-210ENST00000638237 CFAP100Q494V2 611 aa9.9□□□□□ -0.82
NECAP1-210ENST00000638237 OXER1Q8TDS5 423 aa9.9□□□□□ -0.82
NECAP1-210ENST00000638237 SHISA4Q96DD7 197 aa9.9□□□□□ -0.82
NECAP1-210ENST00000638237 RIOK1Q9BRS2 568 aaKnown RBP9.9□□□□□ -0.82
NECAP1-210ENST00000638237 CARD6Q9BX69 1037 aa9.9□□□□□ -0.82
NECAP1-210ENST00000638237 KRT23Q9C075 422 aa9.9□□□□□ -0.82
NECAP1-210ENST00000638237 DUOX1Q9NRD9 1551 aa9.9□□□□□ -0.82
NECAP1-210ENST00000638237 SBF2Q86WG5 1849 aa9.9□□□□□ -0.82
NECAP1-210ENST00000638237 VWA3AA6NCI4 1184 aa9.9□□□□□ -0.83
NECAP1-210ENST00000638237 FAM205CA6NFA0 338 aa9.9□□□□□ -0.83
NECAP1-210ENST00000638237 PPP6R2O75170 966 aa9.9□□□□□ -0.83
NECAP1-210ENST00000638237 TOP1P11387 765 aaKnown RBP9.9□□□□□ -0.83
NECAP1-210ENST00000638237 CLEC4GQ6UXB4 293 aa9.9□□□□□ -0.83
NECAP1-210ENST00000638237 TMEM139Q8IV31 216 aa9.9□□□□□ -0.83
NECAP1-210ENST00000638237 DHX37Q8IY37 1157 aaKnown RBP9.9□□□□□ -0.83
NECAP1-210ENST00000638237 DIS3L2Q8IYB7 885 aaKnown RBP9.9□□□□□ -0.83
NECAP1-210ENST00000638237 ZNF654Q8IZM8 581 aa9.9□□□□□ -0.83
NECAP1-210ENST00000638237 JMYQ8N9B5 988 aa9.9□□□□□ -0.83
NECAP1-210ENST00000638237 MAP3K14Q99558 947 aa9.9□□□□□ -0.83
NECAP1-210ENST00000638237 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.9□□□□□ -0.83
NECAP1-210ENST00000638237 CNNM2Q9H8M5 875 aa9.9□□□□□ -0.83
NECAP1-210ENST00000638237 BSDC1Q9NW68 430 aaPredicted RBP9.9□□□□□ -0.83
NECAP1-210ENST00000638237 AATFQ9NY61 560 aaKnown RBP eCLIP9.9□□□□□ -0.83
NECAP1-210ENST00000638237 GOLGA6L9A6NEM1 432 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 NMT2O60551 498 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 PNOCQ13519 176 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 TRIM29Q14134 588 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 SF3B3Q15393 1217 aaKnown RBP9.89□□□□□ -0.83
NECAP1-210ENST00000638237 NBPF5PQ86XG9 351 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-210ENST00000638237 BBXQ8WY36 941 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-210ENST00000638237 UBAC1Q9BSL1 405 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 PPP2R2CQ9Y2T4 447 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 SRCAPQ6ZRS2 3230 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 ERICH2A1L162 156 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 ZBTB22O15209 634 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 FOXN1O15353 648 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 FMNL1O95466 1100 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-210ENST00000638237 IFNAR1P17181 557 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 GNAT2P19087 354 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 TOB1P50616 345 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-210ENST00000638237 MAP3K9P80192 1104 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 SLC20A2Q08357 652 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 SART3Q15020 963 aaKnown RBP9.89□□□□□ -0.83
NECAP1-210ENST00000638237 PTPN21Q16825 1174 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 CAVIN4Q5BKX8 364 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 OLFM4Q6UX06 510 aa9.89□□□□□ -0.83
NECAP1-210ENST00000638237 GPR161Q8N6U8 529 aaKnown RBP9.89□□□□□ -0.83
NECAP1-210ENST00000638237 ENAHQ8N8S7 591 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-210ENST00000638237 GPR101Q96P66 508 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-210ENST00000638237 LAMB1P07942 1786 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 COL24A1Q17RW2 1714 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 TBC1D8O95759 1140 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 HNRNPH2P55795 449 aaKnown RBP9.88□□□□□ -0.83
NECAP1-210ENST00000638237 UBE4AQ14139 1066 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 CC2D1AQ6P1N0 951 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-210ENST00000638237 FANCLQ9NW38 375 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 VPS54Q9P1Q0 977 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 PCDHB6Q9Y5E3 794 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 USP17L12C9JPN9 530 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 TMEM232C9JQI7 657 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 USP17L21D6R901 530 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 SASH3O75995 380 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 SEC31AO94979 1220 aaKnown RBP9.88□□□□□ -0.83
NECAP1-210ENST00000638237 PLEKHA8P1O95397 391 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 MMP1P03956 469 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 CYP2D6P10635 497 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 MECOMQ03112 1051 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 TBX2Q13207 712 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-210ENST00000638237 SEC23AQ15436 765 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 HSP90AA4PQ58FG1 418 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 RESP18Q5W5W9 173 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 RSRC2Q7L4I2 434 aaKnown RBP9.88□□□□□ -0.83
NECAP1-210ENST00000638237 NOSTRINQ8IVI9 506 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 ELOA2Q8IYF1 753 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-210ENST00000638237 FANCBQ8NB91 859 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 SETDB2Q96T68 719 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 BAG1Q99933 345 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-210ENST00000638237 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.88□□□□□ -0.83
NECAP1-210ENST00000638237 INTS13Q9NVM9 706 aa9.88□□□□□ -0.83
NECAP1-210ENST00000638237 STX10O60499 249 aa9.87□□□□□ -0.83
NECAP1-210ENST00000638237 CASQ1P31415 396 aa9.87□□□□□ -0.83
NECAP1-210ENST00000638237 RPS8P62241 208 aaKnown RBP9.87□□□□□ -0.83
NECAP1-210ENST00000638237 NOM1Q5C9Z4 860 aaKnown RBP9.87□□□□□ -0.83
NECAP1-210ENST00000638237 EARS2Q5JPH6 523 aaKnown RBP9.87□□□□□ -0.83
NECAP1-210ENST00000638237 FAM47AQ5JRC9 791 aa9.87□□□□□ -0.83
NECAP1-210ENST00000638237 METTL16Q86W50 562 aaKnown RBP9.87□□□□□ -0.83
NECAP1-210ENST00000638237 TRIM22Q8IYM9 498 aa9.87□□□□□ -0.83
NECAP1-210ENST00000638237 TXLNBQ8N3L3 684 aa9.87□□□□□ -0.83
NECAP1-210ENST00000638237 CRACR2BQ8N4Y2 399 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-210ENST00000638237 NSUN4Q96CB9 384 aaKnown RBP9.87□□□□□ -0.83
NECAP1-210ENST00000638237 GNL3LQ9NVN8 582 aaKnown RBP9.87□□□□□ -0.83
NECAP1-210ENST00000638237 CCNL1Q9UK58 526 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-210ENST00000638237 MRFAP1Q9Y605 127 aa9.87□□□□□ -0.83
NECAP1-210ENST00000638237 ZNF831Q5JPB2 1677 aa9.87□□□□□ -0.83
NECAP1-210ENST00000638237 DLEC1Q9Y238 1755 aa9.87□□□□□ -0.83
NECAP1-210ENST00000638237 CNTNAP4Q9C0A0 1308 aa9.87□□□□□ -0.83
NECAP1-210ENST00000638237 WNT7AO00755 349 aa9.87□□□□□ -0.83
NECAP1-210ENST00000638237 POLR3GO15318 223 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-210ENST00000638237 ZPR1O75312 459 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms