RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 LRRC59Q96AG4 307 aaKnown RBP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 SH2D4AQ9H788 454 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 ARMT1Q9H993 441 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 KDM2BQ8NHM5 1336 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 GPAA1O43292 621 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 USH1GQ495M9 461 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 TPTE2Q6XPS3 522 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 ATP2A3Q93084 1043 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.08□□□□□ -0.8
CSMD1-218ENST00000635120 MYCLP12524 364 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-218ENST00000635120 UFL1O94874 794 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 MYCT1Q8N699 235 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 FAM207AQ9NSI2 230 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-218ENST00000635120 TXKP42681 527 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 HERC4Q5GLZ8 1057 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-218ENST00000635120 TRMT44Q8IYL2 757 aaKnown RBP10.08□□□□□ -0.8
CSMD1-218ENST00000635120 TMEM87BQ96K49 555 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 RAB3IPQ96QF0 476 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-218ENST00000635120 LSM14BQ9BX40 385 aaKnown RBP10.08□□□□□ -0.8
CSMD1-218ENST00000635120 MTHFSDQ2M296 383 aaKnown RBP10.08□□□□□ -0.8
CSMD1-218ENST00000635120 RRAGAQ7L523 313 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 PARP3Q9Y6F1 533 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 ADCY7P51828 1080 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 CABS1Q96KC9 395 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 MYL10Q9BUA6 226 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 PNOCQ13519 176 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 CROCCP2Q86T23 111 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 RAB17Q9H0T7 212 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 VCX3AQ9NNX9 186 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 MAN1A1P33908 653 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 RTCBQ9Y3I0 505 aaKnown RBP10.08□□□□□ -0.8
CSMD1-218ENST00000635120 ARHGEF12Q9NZN5 1544 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 BCRP11274 1271 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 JDP2Q8WYK2 163 aa10.08□□□□□ -0.8
CSMD1-218ENST00000635120 hCG_1642624A0A1W2PR95 340 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 LGSNQ5TDP6 509 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 MLKLQ8NB16 471 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 KSR1Q8IVT5 923 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 PHACTR3Q96KR7 559 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 DESI2Q9BSY9 194 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 PIK3C2GO75747 1445 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 WHAMMP3Q1A5X7 153 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 FAM227BQ96M60 508 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 CACYBPQ9HB71 228 aaKnown RBP10.07□□□□□ -0.8
CSMD1-218ENST00000635120 POLKQ9UBT6 870 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 ARHGAP42A6NI28 874 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 KLHL30Q0D2K2 578 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 AATFQ9NY61 560 aaKnown RBP eCLIP10.07□□□□□ -0.8
CSMD1-218ENST00000635120 UHRF1BP1LA0JNW5 1464 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 MYO1AQ9UBC5 1043 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 RIPOR2Q9Y4F9 1068 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 ANKRD42Q8N9B4 389 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 GLT8D2Q9H1C3 349 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 VAMP4O75379 141 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 SNX29Q8TEQ0 813 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 BLZF1Q9H2G9 400 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 DENND2AQ9ULE3 1009 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 MYH6P13533 1939 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 STX2P32856 288 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 TNNI3KQ59H18 835 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 LRCH2Q5VUJ6 765 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 REXO1Q8N1G1 1221 aaKnown RBP10.07□□□□□ -0.8
CSMD1-218ENST00000635120 CNBD1Q8NA66 436 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 FPGT-TNNI3KV9GXZ4 949 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 GPATCH8Q9UKJ3 1502 aaKnown RBP10.07□□□□□ -0.8
CSMD1-218ENST00000635120 KRT19P08727 400 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 OTUD7BQ6GQQ9 843 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 GNPATO15228 680 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 EXOC3O60645 756 aa10.07□□□□□ -0.8
CSMD1-218ENST00000635120 ADKP55263 362 aaKnown RBP10.07□□□□□ -0.8
CSMD1-218ENST00000635120 TPX2Q9ULW0 747 aaKnown RBP10.07□□□□□ -0.8
CSMD1-218ENST00000635120 DNMT1P26358 1616 aaKnown RBP10.06□□□□□ -0.8
CSMD1-218ENST00000635120 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 PRDM1O75626 825 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 SLC12A2P55011 1212 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 CTDSPL2Q05D32 466 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 RSAD2Q8WXG1 361 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 EYA3Q99504 573 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 DNM3Q9UQ16 869 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 BAIAP2L1Q9UHR4 511 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 SAR1BQ9Y6B6 198 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 MAP2K2P36507 400 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 ATP1A2P50993 1020 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 KRT81Q14533 505 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 PRR16Q569H4 304 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 ANKRD20A3Q5VUR7 823 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 FNBP4Q8N3X1 1017 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-218ENST00000635120 RBM17Q96I25 401 aaKnown RBP10.06□□□□□ -0.8
CSMD1-218ENST00000635120 STK24Q9Y6E0 443 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 CAPN7Q9Y6W3 813 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 MICAL3Q7RTP6 2002 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 RASSF2P50749 326 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 DDB1Q16531 1140 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 TTC6Q86TZ1 520 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 LRRC43Q8N309 656 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-218ENST00000635120 CTNNA1P35221 906 aaKnown RBP10.06□□□□□ -0.8
CSMD1-218ENST00000635120 MAGEA1P43355 309 aa10.06□□□□□ -0.8
CSMD1-218ENST00000635120 XPO4Q9C0E2 1151 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms