RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 CEP131Q9UPN4 1083 aa23.1■■□□□ 1.29
PBX1-222ENST00000627490 IRS2Q9Y4H2 1338 aa23.1■■□□□ 1.29
PBX1-222ENST00000627490 CACNA1SQ13698 1873 aa23.1■■□□□ 1.29
PBX1-222ENST00000627490 GSG1L2A8MUP6 293 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 SNAP23O00161 211 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 RTN1Q16799 776 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 CT47A1Q5JQC4 288 aaPredicted RBP23.09■■□□□ 1.29
PBX1-222ENST00000627490 TRIML1Q8N9V2 468 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 SENP2Q9HC62 589 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 KIAA1551Q9HCM1 1747 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 ERICH2A1L162 156 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 ZBTB7AO95365 584 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 DEXIO95424 95 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 ZSCAN20P17040 1043 aaPredicted RBP23.09■■□□□ 1.29
PBX1-222ENST00000627490 LMOD1P29536 600 aaPredicted RBP23.09■■□□□ 1.29
PBX1-222ENST00000627490 RASGRF1Q13972 1273 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 METTL16Q86W50 562 aaKnown RBP23.09■■□□□ 1.29
PBX1-222ENST00000627490 CNKSR1Q969H4 720 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 TMX1Q9H3N1 280 aa23.09■■□□□ 1.29
PBX1-222ENST00000627490 DDX41Q9UJV9 622 aaKnown RBP23.09■■□□□ 1.29
PBX1-222ENST00000627490 SERPINC1P01008 464 aa23.08■■□□□ 1.29
PBX1-222ENST00000627490 PTPREP23469 700 aa23.08■■□□□ 1.29
PBX1-222ENST00000627490 ATP2B4P23634 1241 aa23.08■■□□□ 1.29
PBX1-222ENST00000627490 WTAPQ15007 396 aa23.08■■□□□ 1.29
PBX1-222ENST00000627490 NT5DC1Q5TFE4 455 aa23.08■■□□□ 1.29
PBX1-222ENST00000627490 VSTM4Q8IW00 320 aa23.08■■□□□ 1.29
PBX1-222ENST00000627490 SGIP1Q9BQI5 828 aa23.08■■□□□ 1.29
PBX1-222ENST00000627490 ZNF215Q9UL58 517 aaPredicted RBP23.08■■□□□ 1.29
PBX1-222ENST00000627490 PHLPP2Q6ZVD8 1323 aa23.07■■□□□ 1.28
PBX1-222ENST00000627490 RXRAP19793 462 aa23.07■■□□□ 1.28
PBX1-222ENST00000627490 MDM2Q00987 491 aaPredicted RBP23.07■■□□□ 1.28
PBX1-222ENST00000627490 PNOCQ13519 176 aa23.07■■□□□ 1.28
PBX1-222ENST00000627490 CAVIN4Q5BKX8 364 aa23.07■■□□□ 1.28
PBX1-222ENST00000627490 MLKLQ8NB16 471 aa23.07■■□□□ 1.28
PBX1-222ENST00000627490 NKX2-3Q8TAU0 364 aa23.07■■□□□ 1.28
PBX1-222ENST00000627490 PKNOX2Q96KN3 472 aa23.07■■□□□ 1.28
PBX1-222ENST00000627490 ANKIB1Q9P2G1 1089 aa23.07■■□□□ 1.28
PBX1-222ENST00000627490 CTDSPL2Q05D32 466 aa23.06■■□□□ 1.28
PBX1-222ENST00000627490 LONRF3Q496Y0 759 aa23.06■■□□□ 1.28
PBX1-222ENST00000627490 FBXO33Q7Z6M2 555 aa23.06■■□□□ 1.28
PBX1-222ENST00000627490 CCDC34Q96HJ3 373 aa23.06■■□□□ 1.28
PBX1-222ENST00000627490 ARMT1Q9H993 441 aa23.06■■□□□ 1.28
PBX1-222ENST00000627490 PRDM4Q9UKN5 801 aa23.06■■□□□ 1.28
PBX1-222ENST00000627490 SLX4Q8IY92 1834 aa23.06■■□□□ 1.28
PBX1-222ENST00000627490 GPSM2P81274 684 aa23.06■■□□□ 1.28
PBX1-222ENST00000627490 ILDR2Q71H61 639 aa23.06■■□□□ 1.28
PBX1-222ENST00000627490 GNL3LQ9NVN8 582 aaKnown RBP23.06■■□□□ 1.28
PBX1-222ENST00000627490 PCDHA5Q9Y5H7 936 aa23.06■■□□□ 1.28
PBX1-222ENST00000627490 MYH13Q9UKX3 1938 aa23.06■■□□□ 1.28
PBX1-222ENST00000627490 PDS5AQ29RF7 1337 aaKnown RBP23.05■■□□□ 1.28
PBX1-222ENST00000627490 SEMA3EO15041 775 aa23.05■■□□□ 1.28
PBX1-222ENST00000627490 TDO2P48775 406 aa23.05■■□□□ 1.28
PBX1-222ENST00000627490 CCDC93Q567U6 631 aa23.05■■□□□ 1.28
PBX1-222ENST00000627490 DIS3L2Q8IYB7 885 aaKnown RBP23.05■■□□□ 1.28
PBX1-222ENST00000627490 CRACR2BQ8N4Y2 399 aaPredicted RBP23.05■■□□□ 1.28
PBX1-222ENST00000627490 ZNF622Q969S3 477 aaKnown RBP eCLIP23.05■■□□□ 1.28
PBX1-222ENST00000627490 FAM84BQ96KN1 310 aaPredicted RBP23.05■■□□□ 1.28
PBX1-222ENST00000627490 CLIC6Q96NY7 704 aa23.05■■□□□ 1.28
PBX1-222ENST00000627490 SRRTQ9BXP5 876 aaKnown RBP23.05■■□□□ 1.28
PBX1-222ENST00000627490 ANAPC4Q9UJX5 808 aa23.05■■□□□ 1.28
PBX1-222ENST00000627490 FBXO2Q9UK22 296 aaPredicted RBP23.05■■□□□ 1.28
PBX1-222ENST00000627490 BCAMP50895 628 aa23.04■■□□□ 1.28
PBX1-222ENST00000627490 STK11IPQ8N1F8 1099 aa23.04■■□□□ 1.28
PBX1-222ENST00000627490 GGA1Q9UJY5 639 aa23.04■■□□□ 1.28
PBX1-222ENST00000627490 SRPRBQ9Y5M8 271 aaKnown RBP23.04■■□□□ 1.28
PBX1-222ENST00000627490 SLC4A4Q9Y6R1 1079 aa23.04■■□□□ 1.28
PBX1-222ENST00000627490 DUOX1Q9NRD9 1551 aa23.04■■□□□ 1.28
PBX1-222ENST00000627490 GOLGA6L9A6NEM1 432 aa23.04■■□□□ 1.28
PBX1-222ENST00000627490 ZSCAN12O43309 604 aa23.04■■□□□ 1.28
PBX1-222ENST00000627490 TOP1P11387 765 aaKnown RBP23.04■■□□□ 1.28
PBX1-222ENST00000627490 ATP1A3P13637 1013 aa23.04■■□□□ 1.28
PBX1-222ENST00000627490 SARSP49591 514 aaKnown RBP23.04■■□□□ 1.28
PBX1-222ENST00000627490 TGFB2P61812 414 aa23.04■■□□□ 1.28
PBX1-222ENST00000627490 ETF1P62495 437 aaKnown RBP23.04■■□□□ 1.28
PBX1-222ENST00000627490 CFAP100Q494V2 611 aa23.04■■□□□ 1.28
PBX1-222ENST00000627490 ENOX1Q8TC92 643 aaKnown RBP23.04■■□□□ 1.28
PBX1-222ENST00000627490 ATF5Q9Y2D1 282 aaPredicted RBP23.04■■□□□ 1.28
PBX1-222ENST00000627490 CHRNA5P30532 468 aa23.03■■□□□ 1.28
PBX1-222ENST00000627490 TOB1P50616 345 aaPredicted RBP23.03■■□□□ 1.28
PBX1-222ENST00000627490 GABPB1Q06547 395 aaPredicted RBP23.03■■□□□ 1.28
PBX1-222ENST00000627490 POSTNQ15063 836 aa23.03■■□□□ 1.28
PBX1-222ENST00000627490 MYL10Q9BUA6 226 aa23.03■■□□□ 1.28
PBX1-222ENST00000627490 WTIPA6NIX2 430 aaPredicted RBP23.02■■□□□ 1.28
PBX1-222ENST00000627490 BTBD18B2RXH4 712 aa23.02■■□□□ 1.28
PBX1-222ENST00000627490 ARHGAP6O43182 974 aa23.02■■□□□ 1.28
PBX1-222ENST00000627490 BMP15O95972 392 aa23.02■■□□□ 1.28
PBX1-222ENST00000627490 XBP1P17861 261 aa23.02■■□□□ 1.28
PBX1-222ENST00000627490 GYG1P46976 350 aa23.02■■□□□ 1.28
PBX1-222ENST00000627490 CC2D2BQ6DHV5 1058 aa23.02■■□□□ 1.28
PBX1-222ENST00000627490 FOXP4Q8IVH2 680 aaPredicted RBP23.02■■□□□ 1.28
PBX1-222ENST00000627490 FANCBQ8NB91 859 aa23.02■■□□□ 1.28
PBX1-222ENST00000627490 RNF26Q9BY78 433 aaPredicted RBP23.02■■□□□ 1.28
PBX1-222ENST00000627490 TMX4Q9H1E5 349 aaPredicted RBP23.02■■□□□ 1.28
PBX1-222ENST00000627490 TACC3Q9Y6A5 838 aa23.02■■□□□ 1.28
PBX1-222ENST00000627490 BRCA1P38398 1863 aaKnown RBP23.02■■□□□ 1.28
PBX1-222ENST00000627490 PCP11498 1178 aaKnown RBP23.01■■□□□ 1.27
PBX1-222ENST00000627490 HIBADHP31937 336 aaKnown RBP23.01■■□□□ 1.27
PBX1-222ENST00000627490 TBC1D16Q8TBP0 767 aa23.01■■□□□ 1.27
PBX1-222ENST00000627490 SMARCE1Q969G3 411 aa23.01■■□□□ 1.27
PBX1-222ENST00000627490 MAN1B1Q9UKM7 699 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms