RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 PPARAQ07869 468 aa16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 MTMR2Q13614 643 aa16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 MOGSQ13724 837 aa16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 PKN2Q16513 984 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 ZNF444Q8N0Y2 327 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 GTF3C2Q8WUA4 911 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 DYNLL2Q96FJ2 89 aa16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 C12orf42Q96LP6 360 aa16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 PPP4R2Q9NY27 417 aa16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 CTNNA3Q9UI47 895 aa16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 ANAPC4Q9UJX5 808 aa16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 SYNPO2Q9UMS6 1093 aa16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 HSPD1P10809 573 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-216ENST00000626000 GCLCP48506 637 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-216ENST00000626000 HMGCS2P54868 508 aa16.65■□□□□ 0.26
SNRPA1-216ENST00000626000 SP3Q02447 781 aa16.65■□□□□ 0.26
SNRPA1-216ENST00000626000 KIF22Q14807 665 aa16.65■□□□□ 0.26
SNRPA1-216ENST00000626000 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
SNRPA1-216ENST00000626000 SMCR8Q8TEV9 937 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-216ENST00000626000 ZNF296Q8WUU4 475 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-216ENST00000626000 LPAR1Q92633 364 aa16.65■□□□□ 0.26
SNRPA1-216ENST00000626000 CYP2D7A0A087X1C5 515 aa16.64■□□□□ 0.25
SNRPA1-216ENST00000626000 GNRH1P01148 92 aa16.64■□□□□ 0.25
SNRPA1-216ENST00000626000 HOXA7P31268 230 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-216ENST00000626000 ICA1Q05084 483 aa16.64■□□□□ 0.25
SNRPA1-216ENST00000626000 GPAT2Q6NUI2 795 aa16.64■□□□□ 0.25
SNRPA1-216ENST00000626000 CCDC129Q6ZRS4 1044 aa16.64■□□□□ 0.25
SNRPA1-216ENST00000626000 SLC44A5Q8NCS7 719 aa16.64■□□□□ 0.25
SNRPA1-216ENST00000626000 DSCC1Q9BVC3 393 aa16.64■□□□□ 0.25
SNRPA1-216ENST00000626000 RNF41Q9H4P4 317 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-216ENST00000626000 CASP8AP2Q9UKL3 1982 aa16.64■□□□□ 0.25
SNRPA1-216ENST00000626000 IRX3P78415 501 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-216ENST00000626000 SEPT2Q15019 361 aa16.63■□□□□ 0.25
SNRPA1-216ENST00000626000 CASC1Q6TDU7 716 aa16.63■□□□□ 0.25
SNRPA1-216ENST00000626000 CTU1Q7Z7A3 348 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-216ENST00000626000 PLIN4Q96Q06 1357 aa16.63■□□□□ 0.25
SNRPA1-216ENST00000626000 FGAP02671 866 aa16.62■□□□□ 0.25
SNRPA1-216ENST00000626000 AKR1B1P15121 316 aa16.62■□□□□ 0.25
SNRPA1-216ENST00000626000 RASA1P20936 1047 aa16.62■□□□□ 0.25
SNRPA1-216ENST00000626000 JAG1P78504 1218 aa16.62■□□□□ 0.25
SNRPA1-216ENST00000626000 ZNF589Q86UQ0 364 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-216ENST00000626000 CCDC84Q86UT8 332 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-216ENST00000626000 GOPCQ9HD26 462 aa16.62■□□□□ 0.25
SNRPA1-216ENST00000626000 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-216ENST00000626000 TMX2Q9Y320 296 aa16.62■□□□□ 0.25
SNRPA1-216ENST00000626000 GREB1LQ9C091 1923 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-216ENST00000626000 ORC4O43929 436 aa16.61■□□□□ 0.25
SNRPA1-216ENST00000626000 TSPY3P0CV98 308 aa16.61■□□□□ 0.25
SNRPA1-216ENST00000626000 TSPY8P0CW00 308 aa16.61■□□□□ 0.25
SNRPA1-216ENST00000626000 CHMLP26374 656 aa16.61■□□□□ 0.25
SNRPA1-216ENST00000626000 GUCY1A2P33402 732 aa16.61■□□□□ 0.25
SNRPA1-216ENST00000626000 VPS53Q5VIR6 699 aa16.61■□□□□ 0.25
SNRPA1-216ENST00000626000 LAMA4Q16363 1823 aa16.61■□□□□ 0.25
SNRPA1-216ENST00000626000 USP17L15C9J2P7 530 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 USP17L13C9JLJ4 530 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 USP17L11C9JVI0 530 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 USP17L18D6R9N7 530 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 USP17L22D6RA61 530 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 USP17L17D6RBQ6 530 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 USP17L19D6RCP7 530 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 USP17L20D6RJB6 530 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 ZNF213O14771 459 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 FOXP2O15409 715 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 PRMT2P55345 433 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 EVX2Q03828 476 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 USP17L24Q0WX57 530 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 IMMTQ16891 758 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 C17orf99Q6UX52 265 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 NEDD1Q8NHV4 660 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 ADGRA2Q96PE1 1338 aa16.6■□□□□ 0.25
SNRPA1-216ENST00000626000 TSPY2A6NKD2 308 aa16.59■□□□□ 0.25
SNRPA1-216ENST00000626000 FGRP09769 529 aa16.59■□□□□ 0.25
SNRPA1-216ENST00000626000 HOXD10P28358 340 aa16.59■□□□□ 0.25
SNRPA1-216ENST00000626000 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
SNRPA1-216ENST00000626000 TREML2Q5T2D2 321 aa16.59■□□□□ 0.25
SNRPA1-216ENST00000626000 MFSD6Q6ZSS7 791 aa16.59■□□□□ 0.25
SNRPA1-216ENST00000626000 KIAA1211Q6ZU35 1233 aa16.59■□□□□ 0.25
SNRPA1-216ENST00000626000 ASCC2Q9H1I8 757 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-216ENST00000626000 VCPKMTQ9H867 229 aa16.59■□□□□ 0.25
SNRPA1-216ENST00000626000 EMILIN3Q9NT22 766 aa16.59■□□□□ 0.25
SNRPA1-216ENST00000626000 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNRPA1-216ENST00000626000 WDR46O15213 610 aaKnown RBP16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 TTLL1O95922 423 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 CYP2C8P10632 490 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 BCRP11274 1271 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 EEF2P13639 858 aaKnown RBP16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 VCAM1P19320 739 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 LACTBP83111 547 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 DGKZQ13574 1117 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 SHROOM1Q2M3G4 852 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 CCDC178Q5BJE1 867 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 AKNAD1Q5T1N1 836 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 ACER1Q8TDN7 264 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 STAG1Q8WVM7 1258 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 R3HDMLQ9H3Y0 253 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 CNNM2Q9H8M5 875 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 EFCC1Q9HA90 598 aa16.58■□□□□ 0.24
SNRPA1-216ENST00000626000 MYPNQ86TC9 1320 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms