RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 RRP36Q96EU6 259 aaKnown RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 EHD4Q9H223 541 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 TFR2Q9UP52 801 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 MRPS9P82933 396 aaKnown RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 BMP2KQ9NSY1 1161 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 WWC3Q9ULE0 1092 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 ZNF213O14771 459 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 TFRCP02786 760 aaKnown RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 IFIT1P09914 478 aaKnown RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 CHPF2Q9P2E5 772 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 UBA7P41226 1012 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 LRRC36Q1X8D7 754 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 HP1BP3Q5SSJ5 553 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 SLC17A8Q8NDX2 589 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 STAMBPL1Q96FJ0 436 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 NOC4LQ9BVI4 516 aaKnown RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 ETAA1Q9NY74 926 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 MSH6P52701 1360 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 ISLR2Q6UXK2 745 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 UPP2O95045 317 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 TUBB4BP68371 445 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 RCN2Q14257 317 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 DTX3LQ8TDB6 740 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 MRPL46Q9H2W6 279 aaKnown RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 MLXIPQ9HAP2 919 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 NOP53Q9NZM5 478 aaKnown RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 KLHL14Q9P2G3 628 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 AP5Z1O43299 807 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 FOXO3O43524 673 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 TXNDC2Q86VQ3 553 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 B4GALNT2Q8NHY0 566 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 MDM1Q8TC05 714 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 ERLEC1Q96DZ1 483 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 PPP1R9AQ9ULJ8 1098 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 PTPRKQ15262 1439 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 SNUPNO95149 360 aaKnown RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 DESP17661 470 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 MAGOHP61326 146 aaKnown RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 NSMCE1Q8WV22 266 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 MAGOHBQ96A72 148 aaKnown RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 CHCHD3Q9NX63 227 aaKnown RBP5.58□□□□□ -1.52
VPS13D-214ENST00000620676 TBK1Q9UHD2 729 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 STXBP3O00186 592 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 TUBB2AQ13885 445 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 MS4A14Q96JA4 679 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 TUBB2BQ9BVA1 445 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 RMI1Q9H9A7 625 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 PTPN22Q9Y2R2 807 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 B4DLN1 442 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 ZBTB43O43298 467 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 MORC3Q14149 939 aa5.58□□□□□ -1.52
VPS13D-214ENST00000620676 NR1D1P20393 614 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 RILPQ96NA2 401 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 SCAPERQ9BY12 1400 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 PI4KAP2A4QPH2 592 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 EXOC5O00471 708 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 RBM6P78332 1123 aaKnown RBP5.57□□□□□ -1.52
VPS13D-214ENST00000620676 PI4KAP1Q8N8J0 262 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 SNX1Q13596 522 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 TTF1Q15361 905 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-214ENST00000620676 ACBD5Q5T8D3 534 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-214ENST00000620676 FAM133AQ8N9E0 248 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 MKRN4PQ13434 485 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-214ENST00000620676 MPRIPQ6WCQ1 1025 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 AMOTL1Q8IY63 956 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 LRP2BPQ9P2M1 347 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 ANKRD50Q9ULJ7 1429 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 CCT8L2Q96SF2 557 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 PLEKHH2Q8IVE3 1493 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 PNMA6EA0A0J9YXQ4 647 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 CCDC194A0A1B0GVG4 234 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 PHLDB2Q86SQ0 1253 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 CCDC26Q8TAB7 109 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 VPS37BQ9H9H4 285 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 PICK1Q9NRD5 415 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 BICDL2A1A5D9 508 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 ANP32DO95626 131 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 KRT10P13645 584 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 CFAP57Q96MR6 1250 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 KIF2CQ99661 725 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 HELLSQ9NRZ9 838 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 ARPP21Q9UBL0 812 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-214ENST00000620676 OR2W6PQ8NHA6 318 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 NAPBQ9H115 298 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 IRAK1P51617 712 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 TFCP2Q12800 502 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 KANK3Q6NY19 840 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 HPCAL4Q9UM19 191 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 TUBBP07437 444 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 NLRP6P59044 892 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 KCNB1Q14721 858 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 CCDC93Q567U6 631 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 MECOMQ03112 1051 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 RETREG2Q8NC44 543 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 TBC1D5Q92609 795 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 USP6NLQ92738 828 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 LRRC14Q15048 493 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 RTN1Q16799 776 aa5.57□□□□□ -1.52
VPS13D-214ENST00000620676 E4F1Q66K89 784 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-214ENST00000620676 ZNF530Q6P9A1 599 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms