RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ZNF274Q96GC6 653 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-210ENST00000620204 KCNJ14Q9UNX9 436 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 FPGT-TNNI3KV9GXZ4 949 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 USP31Q70CQ4 1352 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 ATP1A1P05023 1023 aaKnown RBP10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 MYBL2P10244 700 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 USP14P54578 494 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 TUBB4BP68371 445 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 GUCY1A3Q02108 690 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 UBXN1Q04323 297 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 CHP1Q99653 195 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 TUBE1Q9UJT0 475 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 EIF4E1BA6NMX2 242 aaKnown RBP10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 TMTC1Q8IUR5 882 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 RRP36Q96EU6 259 aaKnown RBP10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 PAG1Q9NWQ8 432 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 BAIAP2L1Q9UHR4 511 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 EPN1Q9Y6I3 576 aaPredicted RBP10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 GUCY2FP51841 1108 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 GSCP56915 257 aaPredicted RBP10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 GRIN1Q05586 938 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 RRAGBQ5VZM2 374 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 TTC5Q8N0Z6 440 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 NUP133Q8WUM0 1156 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 ALDH8A1Q9H2A2 487 aaPredicted RBP10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 CTNND2Q9UQB3 1225 aa10.99□□□□□ -0.65
TNFAIP3-210ENST00000620204 A0A1B0GUA9 196 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 UBE2Q2LH0YL09 131 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 ZNF213O14771 459 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 EIF3HO15372 352 aaKnown RBP eCLIP10.98□□□□□ -0.652e-7■■■□□ 18.4
TNFAIP3-210ENST00000620204 MFAP3LO75121 409 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 EIF4A1P60842 406 aaKnown RBP10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 CCDC40Q4G0X9 1142 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 CYP26C1Q6V0L0 522 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 CMTR1Q8N1G2 835 aaKnown RBP10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 ARL8AQ96BM9 186 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 KLC4Q9NSK0 619 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 USP42Q9H9J4 1324 aaKnown RBP10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 BTBD18B2RXH4 712 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 TUBB2AQ13885 445 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 LINS1Q8NG48 757 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 PANX2Q96RD6 677 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 TUBB2BQ9BVA1 445 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 SYNRGQ9UMZ2 1314 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 ARHGEF10O15013 1369 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 KRT14P02533 472 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 ATP5JP18859 108 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 ARHGAP25P42331 645 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 CYP27A1Q02318 531 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 EPHA10Q5JZY3 1008 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 KBTBD3Q8NAB2 608 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 BLZF1Q9H2G9 400 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 ZNHIT6Q9NWK9 470 aaKnown RBP10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 MED23Q9ULK4 1368 aa10.98□□□□□ -0.65
TNFAIP3-210ENST00000620204 NALCNQ8IZF0 1738 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 CKAP4Q07065 602 aaKnown RBP10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 TBX2Q13207 712 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 EZH2Q15910 746 aaKnown RBP10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 CFAP58Q5T655 872 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 USP49Q70CQ1 688 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 ENOX1Q8TC92 643 aaKnown RBP10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 SMARCAL1Q9NZC9 954 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 MEFVO15553 781 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 CPP00450 1065 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 HLTFQ14527 1009 aaKnown RBP eCLIP10.97□□□□□ -0.659e-6■□□□□ 9.4
TNFAIP3-210ENST00000620204 CCDC96Q2M329 555 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 NCOA7Q8NI08 942 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 TRIM6Q9C030 488 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 UBAP1LF5GYI3 381 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 APBA1Q02410 837 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 NNTQ13423 1086 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 NR1I3Q14994 352 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 USPL1Q5W0Q7 1092 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 PNMA8AQ86V59 439 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 ZKSCAN4Q969J2 545 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 NAA15Q9BXJ9 866 aaKnown RBP10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 BTG4Q9NY30 223 aa10.97□□□□□ -0.65
TNFAIP3-210ENST00000620204 GOLGA6L10A6NI86 522 aa10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 GOLGA8AA7E2F4 631 aa10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 PDHBP11177 359 aa10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 CABP4P57796 275 aa10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 ANKRD13CQ8N6S4 541 aa10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 LUC7L2Q9Y383 392 aaKnown RBP10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 XRN1Q8IZH2 1706 aaKnown RBP10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 COL15A1P39059 1388 aa10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 KRT86O43790 486 aa10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 PRPF6O94906 941 aaKnown RBP10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 IQCEQ6IPM2 695 aa10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 RASGRP2Q7LDG7 609 aa10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 CTAGE1Q96RT6 745 aa10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 CARD10Q9BWT7 1032 aa10.96□□□□□ -0.65
TNFAIP3-210ENST00000620204 A0A087WZG4 1122 aa10.96□□□□□ -0.66
TNFAIP3-210ENST00000620204 ESYT3A0FGR9 886 aa10.96□□□□□ -0.66
TNFAIP3-210ENST00000620204 ERCC3P19447 782 aa10.96□□□□□ -0.66
TNFAIP3-210ENST00000620204 TRIM21P19474 475 aaKnown RBP10.96□□□□□ -0.66
TNFAIP3-210ENST00000620204 GPTP24298 496 aa10.96□□□□□ -0.66
TNFAIP3-210ENST00000620204 ERVK-24P63145 666 aa10.96□□□□□ -0.66
TNFAIP3-210ENST00000620204 EXOSC10Q01780 885 aaKnown RBP10.96□□□□□ -0.66
TNFAIP3-210ENST00000620204 ENOX2Q16206 610 aaKnown RBP10.96□□□□□ -0.66
TNFAIP3-210ENST00000620204 MICAL1Q8TDZ2 1067 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms