RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 IQUBQ8NA54 791 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 NCOA7Q8NI08 942 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 PARD3BQ8TEW8 1205 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 KAT2BQ92831 832 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 SPATS2LQ9NUQ6 558 aaKnown RBP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 ANKRD36CQ5JPF3 1778 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 PRDX5P30044 214 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 ERCC6LQ2NKX8 1250 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 TRAPPC3LQ5T215 181 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 CEP135Q66GS9 1140 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 IFNL3Q8IZI9 196 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 ERO1AQ96HE7 468 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 MRFAP1L1Q96HT8 127 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 TMEM165Q9HC07 324 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 ATP6V1DQ9Y5K8 247 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 TACC3Q9Y6A5 838 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 JCADQ9P266 1359 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 FRMD3A2A2Y4 597 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 IFIT3O14879 490 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 RANBP6O60518 1105 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 SKAP2O75563 359 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 MBD3O95983 291 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 H2AFXP16104 143 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 FGFR2P21802 821 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 RPS8P62241 208 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 LRMPQ12912 555 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 GRIK3Q13003 919 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 DHX8Q14562 1220 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 SETDB1Q15047 1291 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 LRRFIP1Q32MZ4 808 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 MYLK4Q86YV6 388 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 MSL3Q8N5Y2 521 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 MICAL1Q8TDZ2 1067 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 STRBPQ96SI9 672 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 DACT1Q9NYF0 836 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 ORC3Q9UBD5 711 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 NRAPQ86VF7 1730 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 MYH13Q9UKX3 1938 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 F8W031 263 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 PES1O00541 588 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 EPB41L2O43491 1005 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 ZFYP08048 801 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 UQCRFS1P1P0C7P4 283 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 GCFC2P16383 781 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 EXOSC10Q01780 885 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 GNL2Q13823 731 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 TTF1Q15361 905 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 CAVIN4Q5BKX8 364 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 TMEM67Q5HYA8 995 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 TPTE2Q6XPS3 522 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 ZBTB10Q96DT7 871 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 ADAM21Q9UKJ8 722 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 MYH2Q9UKX2 1941 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 RIMBP2O15034 1052 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 NMT2O60551 498 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 NR1I2O75469 434 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 ME1P48163 572 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 UBE2HP62256 183 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 NEDD9Q14511 834 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 RBBP5Q15291 538 aaKnown RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 DIXDC1Q155Q3 683 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 FBXW10Q5XX13 1052 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 ISM2Q6H9L7 571 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 EFCAB13Q8IY85 973 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 ARMC2Q8NEN0 867 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 CCDC34Q96HJ3 373 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 FAM84BQ96KN1 310 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-214ENST00000617767 PLEKHA4Q9H4M7 779 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 KIF9Q9HAQ2 790 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 ZSWIM5Q9P217 1185 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 PCDHGA4Q9Y5G9 962 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 NWD2Q9ULI1 1742 aa6.32□□□□□ -1.4
CPNE4-214ENST00000617767 TCRBV5S4A2TA0A5A2 114 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 PFKFB2O60825 505 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 SEC31AO94979 1220 aaKnown RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 SNUPNO95149 360 aaKnown RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 FDPSP14324 419 aaKnown RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 PDCP20941 246 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 MARCKSP29966 332 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 CDC27P30260 824 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 GCKP35557 465 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 FAM47AQ5JRC9 791 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 ZSCAN25Q6NSZ9 544 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 KCNV1Q6PIU1 500 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 MB21D2Q8IYB1 491 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 USP28Q96RU2 1077 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 BAG1Q99933 345 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 CHCHD3Q9NX63 227 aaKnown RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 NARFQ9UHQ1 456 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 CENPFP49454 3210 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 GSG1L2A8MUP6 293 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 RPS6KA4O75676 772 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 CYP2D6P10635 497 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 NAT1P18440 290 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 NF2P35240 595 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 USP8P40818 1118 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 PEX19P40855 299 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 METAP2P50579 478 aaKnown RBP eCLIP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 MYBPC2Q14324 1141 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 GRIK5Q16478 980 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms