RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 FAM53CQ9NYF3 392 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 KIF20AO95235 890 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 NTSR2O95665 410 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 SLFN14P0C7P3 912 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 KRT2P35908 639 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 GABPB1Q06547 395 aaPredicted RBP13.45□□□□□ -0.26
C11orf54-215ENST00000617482 NR1I3Q14994 352 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 ZNF174Q15697 407 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 SMYD4Q8IYR2 804 aaPredicted RBP13.45□□□□□ -0.26
C11orf54-215ENST00000617482 SPATA20Q8TB22 786 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 CPLX3Q8WVH0 158 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 STAMQ92783 540 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 SYMPKQ92797 1274 aaKnown RBP13.45□□□□□ -0.26
C11orf54-215ENST00000617482 MTA3Q9BTC8 594 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 EPC1Q9H2F5 836 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
C11orf54-215ENST00000617482 CASQ1P31415 396 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 EVX2Q03828 476 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 MTF1Q14872 753 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 PARP10Q53GL7 1025 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 CATIPQ7Z7H3 387 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 PAGE5Q96GU1 130 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 PHF20Q9BVI0 1012 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 DISP2A7MBM2 1401 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 COBLO75128 1261 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 RCAN1P53805 252 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 FUT2Q10981 343 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 BMS1Q14692 1282 aaKnown RBP13.44□□□□□ -0.26
C11orf54-215ENST00000617482 KARSQ15046 597 aaKnown RBP13.44□□□□□ -0.26
C11orf54-215ENST00000617482 RIOK1Q9BRS2 568 aaKnown RBP13.44□□□□□ -0.26
C11orf54-215ENST00000617482 AATFQ9NY61 560 aaKnown RBP eCLIP13.44□□□□□ -0.26
C11orf54-215ENST00000617482 ANAPC4Q9UJX5 808 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 FHOD1Q9Y613 1164 aa13.44□□□□□ -0.26
C11orf54-215ENST00000617482 ANKRD36CQ5JPF3 1778 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 KDM4FA0A1W2PPD8 638 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 TADA3O75528 432 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 ERCC5P28715 1186 aaPredicted RBP13.43□□□□□ -0.26
C11orf54-215ENST00000617482 ITPK1Q13572 414 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 TERF2Q15554 542 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 RTL9Q8NET4 1388 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 LOC102724428A0A0B4J2F2 783 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 SOWAHDA6NJG2 315 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 PRPF3O43395 683 aaKnown RBP13.43□□□□□ -0.26
C11orf54-215ENST00000617482 SIK1P57059 783 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 C3orf67Q6ZVT6 689 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 IQCA1Q86XH1 822 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 SRRTQ9BXP5 876 aaKnown RBP13.43□□□□□ -0.26
C11orf54-215ENST00000617482 IRX2Q9BZI1 471 aaPredicted RBP13.43□□□□□ -0.26
C11orf54-215ENST00000617482 LRP5O75197 1615 aa13.43□□□□□ -0.26
C11orf54-215ENST00000617482 NHSL1Q5SYE7 1610 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 A0A1B0GTH6 734 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 NMT2O60551 498 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 ADAMTS2O95450 1211 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 RBL2Q08999 1139 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 TROAPQ12815 778 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 SPATA1Q5VX52 437 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 CDC5LQ99459 802 aaKnown RBP13.42□□□□□ -0.26
C11orf54-215ENST00000617482 GNL3LQ9NVN8 582 aaKnown RBP13.42□□□□□ -0.26
C11orf54-215ENST00000617482 EFCAB8A8MWE9 144 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 USP17L12C9JPN9 530 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 AKR1B15C9JRZ8 316 aaPredicted RBP13.42□□□□□ -0.26
C11orf54-215ENST00000617482 USP17L21D6R901 530 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 PPP2R5BQ15173 497 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 APTXQ7Z2E3 356 aaKnown RBP13.42□□□□□ -0.26
C11orf54-215ENST00000617482 ANKRD18AQ8IVF6 992 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 IGSF22Q8N9C0 903 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 ZNF384Q8TF68 577 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 CCDC34Q96HJ3 373 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 TIAM2Q8IVF5 1701 aa13.42□□□□□ -0.26
C11orf54-215ENST00000617482 GOLGA6L9A6NEM1 432 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 SEC31AO94979 1220 aaKnown RBP13.41□□□□□ -0.26
C11orf54-215ENST00000617482 PNMA6AP0CW24 399 aaPredicted RBP13.41□□□□□ -0.26
C11orf54-215ENST00000617482 MAP3K9P80192 1104 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 PTGDRQ13258 359 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 CUL4BQ13620 913 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 CAVIN4Q5BKX8 364 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 FAM47AQ5JRC9 791 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 CTR9Q6PD62 1173 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 TMCO3Q6UWJ1 677 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 NOL10Q9BSC4 688 aaKnown RBP13.41□□□□□ -0.26
C11orf54-215ENST00000617482 BLZF1Q9H2G9 400 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 MRPL44Q9H9J2 332 aaKnown RBP13.41□□□□□ -0.26
C11orf54-215ENST00000617482 LZTFL1Q9NQ48 299 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 CHD4Q14839 1912 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 A0A0U1RQJ8 604 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 ZNF804BA4D1E1 1349 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
C11orf54-215ENST00000617482 DPYDQ12882 1025 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 TTC38Q5R3I4 469 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 SH3RF1Q7Z6J0 888 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 PPFIBP1Q86W92 1011 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 ATRIPQ8WXE1 791 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 FERMT2Q96AC1 680 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 BRMS1Q9HCU9 246 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 ARGLU1Q9NWB6 273 aaPredicted RBP13.41□□□□□ -0.26
C11orf54-215ENST00000617482 SYNRGQ9UMZ2 1314 aa13.41□□□□□ -0.26
C11orf54-215ENST00000617482 DOCK2Q92608 1830 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 NPY5RQ15761 445 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 SLC4A8Q2Y0W8 1093 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms