RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 USP17L2Q6R6M4 530 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 USP37Q86T82 979 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 CCDC65Q8IXS2 484 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 SLC44A5Q8NCS7 719 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 LEO1Q8WVC0 666 aaPredicted RBP11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 CCDC102AQ96A19 550 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 AZI2Q9H6S1 392 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 PTPRMP28827 1452 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 CYP2D6P10635 497 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 UBXN1Q04323 297 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 HLTFQ14527 1009 aaKnown RBP eCLIP11.41□□□□□ -0.581e-13■□□□□ 9.1
SMARCA1-205ENST00000617310 NLRX1Q86UT6 975 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 VWDEQ8N2E2 1590 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 MROH1Q8NDA8 1641 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 ZFP91Q96JP5 570 aaPredicted RBP11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 CPVLQ9H3G5 476 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 RICTORQ6R327 1708 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 GAS7O60861 476 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 FBXO11Q86XK2 927 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 ZNF354CQ86Y25 554 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 PSMD1Q99460 953 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 LLPHQ9BRT6 129 aaKnown RBP11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 RTEL1Q9NZ71 1219 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 RNF181Q9P0P0 153 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 CCPG1Q9ULG6 757 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 ABT1Q9ULW3 272 aaKnown RBP11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 SKILP12757 684 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 VPS72Q15906 364 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 HAUS3Q68CZ6 603 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 SNAP25P60880 206 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 MYSM1Q5VVJ2 828 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 MAP4K1Q92918 833 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 USP28Q96RU2 1077 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 PODXL2Q9NZ53 605 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 IQGAP3Q86VI3 1631 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 CDC42BPGQ6DT37 1551 aa11.4□□□□□ -0.58
SMARCA1-205ENST00000617310 TRMT44Q8IYL2 757 aaKnown RBP11.4□□□□□ -0.59
SMARCA1-205ENST00000617310 FNBP1Q96RU3 617 aa11.4□□□□□ -0.59
SMARCA1-205ENST00000617310 LSG1Q9H089 658 aaKnown RBP11.4□□□□□ -0.59
SMARCA1-205ENST00000617310 SUGCTQ9HAC7 445 aa11.4□□□□□ -0.59
SMARCA1-205ENST00000617310 MLXIPQ9HAP2 919 aa11.4□□□□□ -0.59
SMARCA1-205ENST00000617310 AS3MTQ9HBK9 375 aa11.4□□□□□ -0.59
SMARCA1-205ENST00000617310 CD209Q9NNX6 404 aa11.4□□□□□ -0.59
SMARCA1-205ENST00000617310 STAP2Q9UGK3 403 aa11.4□□□□□ -0.59
SMARCA1-205ENST00000617310 PTCH1Q13635 1447 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 TMEM110-MUSTN1A8MSY1 372 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 NEMFO60524 1076 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 GSDMDP57764 484 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 METTL13Q8N6R0 699 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 TBC1D5Q92609 795 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 TM6SF1Q9BZW5 370 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 CTNND2Q9UQB3 1225 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 ADGRB3O60242 1522 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 ADAMTS13Q76LX8 1427 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 FRMPD1Q5SYB0 1578 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 ELP1O95163 1332 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 CASQ1P31415 396 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 TECP42680 631 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 PLCD1P51178 756 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 TERF1P54274 439 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 ITPK1Q13572 414 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 ARHGEF16Q5VV41 709 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 APOA5Q6Q788 366 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 TRIM6Q9C030 488 aaPredicted RBP11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 GPR108Q9NPR9 543 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 SPATA31A1Q5TZJ5 1347 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 ERLIN1O75477 346 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 ZNF202O95125 648 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 BLIDQ8IZY5 108 aa11.39□□□□□ -0.59
SMARCA1-205ENST00000617310 SCG2P13521 617 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 PDIA3P30101 505 aaKnown RBP11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 ZNF827Q17R98 1081 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 MYCT1Q8N699 235 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 DNM3Q9UQ16 869 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 SOS2Q07890 1332 aaPredicted RBP11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 DIP2CQ9Y2E4 1556 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 CAVIN2O95810 425 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 IGBP1P78318 339 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 TMC4Q7Z404 712 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 COA7Q96BR5 231 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 AIFM3Q96NN9 605 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 CYP2E1P05181 493 aaPredicted RBP11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 EEF2P13639 858 aaKnown RBP11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 Q3C1V9 767 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 CABP7Q86V35 215 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 IFT74Q96LB3 600 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 COA1Q9GZY4 146 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 TSPYL1Q9H0U9 437 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 ZSWIM6Q9HCJ5 1215 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 ZSWIM5Q9P217 1185 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 GH2P01242 217 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 TBC1D8BQ0IIM8 1120 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 SCRN1Q12765 414 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 SNW1Q13573 536 aaKnown RBP11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 SCARF1Q14162 830 aa11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 KARSQ15046 597 aaKnown RBP11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 UTP14CQ5TAP6 766 aaKnown RBP11.38□□□□□ -0.59
SMARCA1-205ENST00000617310 IQCEQ6IPM2 695 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms