RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ZNF213O14771 459 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 CHGBP05060 677 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 ERCC3P19447 782 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 NAP1L1P55209 391 aaKnown RBP10.1□□□□□ -0.79
VPS11-206ENST00000614944 DACT2Q5SW24 774 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 MB21D2Q8IYB1 491 aaPredicted RBP10.1□□□□□ -0.79
VPS11-206ENST00000614944 JAKMIP1Q96N16 626 aaKnown RBP10.1□□□□□ -0.79
VPS11-206ENST00000614944 PDRG1Q9NUG6 133 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 TPM1P09493 284 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 PRDX5P30044 214 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 MMS22LQ6ZRQ5 1243 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 PRPF38AQ8NAV1 312 aaKnown RBP10.09□□□□□ -0.79
VPS11-206ENST00000614944 MTMR14Q8NCE2 650 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 KRT23Q9C075 422 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 SERPINA10Q9UK55 444 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 COL4A5P29400 1685 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 USP17L3A6NCW0 530 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 USP17L4A6NCW7 530 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 ORC4O43929 436 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 ECE2O60344 883 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 NEBLO76041 1014 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 ECEL1O95672 775 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 CASTP20810 708 aaKnown RBP10.09□□□□□ -0.79
VPS11-206ENST00000614944 TRAF1Q13077 416 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 ADCK5Q3MIX3 580 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 USP17L1Q7RTZ2 530 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 NCOA7Q8NI08 942 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 ABCF2Q9UG63 623 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 CD2BP2O95400 341 aaKnown RBP10.09□□□□□ -0.79
VPS11-206ENST00000614944 PAX3P23760 479 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 BMS1Q14692 1282 aaKnown RBP10.09□□□□□ -0.79
VPS11-206ENST00000614944 MFSD14BQ5SR56 506 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 WWC2Q6AWC2 1192 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 STOX1Q6ZVD7 989 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 NEK11Q8NG66 645 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 TMEM87BQ96K49 555 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 ZDHHC15Q96MV8 337 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 ARMT1Q9H993 441 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 SPON1Q9HCB6 807 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 ZNF232Q9UNY5 417 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 SLC4A4Q9Y6R1 1079 aa10.09□□□□□ -0.79
VPS11-206ENST00000614944 SMC2O95347 1197 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 ZBTB7AO95365 584 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 VIL1P09327 827 aaKnown RBP10.08□□□□□ -0.8
VPS11-206ENST00000614944 SKILP12757 684 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 NAPBQ9H115 298 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 PPFIA2O75334 1257 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 EIF3JO75822 258 aaKnown RBP10.08□□□□□ -0.8
VPS11-206ENST00000614944 PSMD2Q13200 908 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 SLFNL1Q499Z3 407 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 CLEC17AQ6ZS10 378 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 PPM1EQ8WY54 764 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 ZNF274Q96GC6 653 aaPredicted RBP10.08□□□□□ -0.8
VPS11-206ENST00000614944 FAXDC2Q96IV6 333 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 BAZ2AQ9UIF9 1905 aaKnown RBP10.08□□□□□ -0.8
VPS11-206ENST00000614944 SBF1O95248 1867 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 FAM163BP0C2L3 166 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 AK2P54819 239 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 GPS2Q13227 327 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 TTLL5Q6EMB2 1281 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 FMNL3Q8IVF7 1028 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 AGBL3Q8NEM8 1001 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 ZNF397Q8NF99 534 aaPredicted RBP10.08□□□□□ -0.8
VPS11-206ENST00000614944 TMX3Q96JJ7 454 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 GMLQ99445 158 aa10.08□□□□□ -0.8
VPS11-206ENST00000614944 TACO1Q9BSH4 297 aaKnown RBP10.08□□□□□ -0.8
VPS11-206ENST00000614944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.08□□□□□ -0.8
VPS11-206ENST00000614944 ADAMTSL1Q8N6G6 1762 aa10.07□□□□□ -0.8
VPS11-206ENST00000614944 A0A0G2JLW4 131 aa10.07□□□□□ -0.8
VPS11-206ENST00000614944 RHBDL3P58872 404 aa10.07□□□□□ -0.8
VPS11-206ENST00000614944 TOB2Q14106 344 aaPredicted RBP10.07□□□□□ -0.8
VPS11-206ENST00000614944 AKNAD1Q5T1N1 836 aa10.07□□□□□ -0.8
VPS11-206ENST00000614944 SLC51AQ86UW1 340 aa10.07□□□□□ -0.8
VPS11-206ENST00000614944 CERS5Q8N5B7 392 aa10.07□□□□□ -0.8
VPS11-206ENST00000614944 LLPHQ9BRT6 129 aaKnown RBP10.07□□□□□ -0.8
VPS11-206ENST00000614944 RMI1Q9H9A7 625 aa10.07□□□□□ -0.8
VPS11-206ENST00000614944 SIPA1L1O43166 1804 aa10.07□□□□□ -0.8
VPS11-206ENST00000614944 PES1O00541 588 aaKnown RBP10.07□□□□□ -0.8
VPS11-206ENST00000614944 IARSP41252 1262 aaKnown RBP10.07□□□□□ -0.8
VPS11-206ENST00000614944 CCDC178Q5BJE1 867 aa10.07□□□□□ -0.8
VPS11-206ENST00000614944 DCP1AQ9NPI6 582 aaPredicted RBP10.07□□□□□ -0.8
VPS11-206ENST00000614944 ST7Q9NRC1 585 aa10.07□□□□□ -0.8
VPS11-206ENST00000614944 IQSEC3Q9UPP2 1182 aaPredicted RBP10.07□□□□□ -0.8
VPS11-206ENST00000614944 PLIN4Q96Q06 1357 aa10.07□□□□□ -0.8
VPS11-206ENST00000614944 C21orf2O43822 256 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 RPS12P25398 132 aaKnown RBP10.06□□□□□ -0.8
VPS11-206ENST00000614944 LIFRP42702 1097 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 GTF2IP78347 998 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 PPARAQ07869 468 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 SGMS1Q86VZ5 419 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 THOC1Q96FV9 657 aaKnown RBP10.06□□□□□ -0.8
VPS11-206ENST00000614944 RANBP17Q9H2T7 1088 aaKnown RBP10.06□□□□□ -0.8
VPS11-206ENST00000614944 SLC24A3Q9HC58 644 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 ZNRF3Q9ULT6 936 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 SLC3A2P08195 630 aaKnown RBP10.06□□□□□ -0.8
VPS11-206ENST00000614944 MAGEA8P43361 318 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 FKBP1CQ5VVH2 108 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 GPT2Q8TD30 523 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 MIEF2Q96C03 454 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms