RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 STK11IPQ8N1F8 1099 aa14.78□□□□□ -0.04
CTSA-210ENST00000606000 ZNF333Q96JL9 665 aa14.78□□□□□ -0.04
CTSA-210ENST00000606000 CABP5Q9NP86 173 aa14.78□□□□□ -0.04
CTSA-210ENST00000606000 SRRDQ9UH36 339 aa14.78□□□□□ -0.04
CTSA-210ENST00000606000 GREB1LQ9C091 1923 aaPredicted RBP14.78□□□□□ -0.04
CTSA-210ENST00000606000 PLXNB2O15031 1838 aa14.78□□□□□ -0.04
CTSA-210ENST00000606000 A0A1W2PRG0 241 aa14.77□□□□□ -0.05
CTSA-210ENST00000606000 PDE1AP54750 535 aa14.77□□□□□ -0.05
CTSA-210ENST00000606000 IRX3P78415 501 aaPredicted RBP14.77□□□□□ -0.05
CTSA-210ENST00000606000 PABPC4Q13310 644 aaKnown RBP eCLIP14.77□□□□□ -0.052e-8■■□□□ 11.5
CTSA-210ENST00000606000 FAM110CQ1W6H9 321 aa14.77□□□□□ -0.05
CTSA-210ENST00000606000 USP17L2Q6R6M4 530 aa14.77□□□□□ -0.05
CTSA-210ENST00000606000 POTEEQ6S8J3 1075 aa14.77□□□□□ -0.05
CTSA-210ENST00000606000 SMC5Q8IY18 1101 aa14.77□□□□□ -0.05
CTSA-210ENST00000606000 P2RX7Q99572 595 aaKnown RBP14.77□□□□□ -0.05
CTSA-210ENST00000606000 TXNRD2Q9NNW7 524 aa14.77□□□□□ -0.05
CTSA-210ENST00000606000 GNRH1P01148 92 aa14.76□□□□□ -0.05
CTSA-210ENST00000606000 ZFYP08048 801 aaPredicted RBP14.76□□□□□ -0.05
CTSA-210ENST00000606000 VCAM1P19320 739 aa14.76□□□□□ -0.05
CTSA-210ENST00000606000 HOXA7P31268 230 aaPredicted RBP14.76□□□□□ -0.05
CTSA-210ENST00000606000 CDK8P49336 464 aa14.76□□□□□ -0.05
CTSA-210ENST00000606000 HERVK_113P62684 666 aa14.76□□□□□ -0.05
CTSA-210ENST00000606000 CCDC129Q6ZRS4 1044 aa14.76□□□□□ -0.05
CTSA-210ENST00000606000 C16orf86Q6ZW13 317 aa14.76□□□□□ -0.05
CTSA-210ENST00000606000 C12orf42Q96LP6 360 aa14.76□□□□□ -0.05
CTSA-210ENST00000606000 ZBTB47Q9UFB7 747 aaPredicted RBP14.76□□□□□ -0.05
CTSA-210ENST00000606000 STAP2Q9UGK3 403 aa14.76□□□□□ -0.05
CTSA-210ENST00000606000 SWAP70Q9UH65 585 aa14.76□□□□□ -0.05
CTSA-210ENST00000606000 TNPO2O14787 897 aaKnown RBP14.75□□□□□ -0.05
CTSA-210ENST00000606000 KIAA1755Q5JYT7 1200 aa14.75□□□□□ -0.05
CTSA-210ENST00000606000 ZMYM1Q5SVZ6 1142 aa14.75□□□□□ -0.05
CTSA-210ENST00000606000 RAET1EQ8TD07 263 aa14.75□□□□□ -0.05
CTSA-210ENST00000606000 DDRGK1Q96HY6 314 aa14.75□□□□□ -0.05
CTSA-210ENST00000606000 KIAA1683Q9H0B3 1180 aa14.75□□□□□ -0.05
CTSA-210ENST00000606000 RWDD1Q9H446 243 aaPredicted RBP14.75□□□□□ -0.05
CTSA-210ENST00000606000 ARPP21Q9UBL0 812 aaPredicted RBP14.75□□□□□ -0.05
CTSA-210ENST00000606000 A0A0G2JMZ2 1700 aa14.75□□□□□ -0.05
CTSA-210ENST00000606000 PARP14Q460N5 1801 aa14.74□□□□□ -0.05
CTSA-210ENST00000606000 MINDY4BA8MYZ0 360 aa14.74□□□□□ -0.05
CTSA-210ENST00000606000 GCLCP48506 637 aaPredicted RBP14.74□□□□□ -0.05
CTSA-210ENST00000606000 FLT3LGP49771 235 aa14.74□□□□□ -0.05
CTSA-210ENST00000606000 PRMT2P55345 433 aa14.74□□□□□ -0.05
CTSA-210ENST00000606000 AAMPQ13685 434 aa14.74□□□□□ -0.05
CTSA-210ENST00000606000 MTFR1Q15390 333 aa14.74□□□□□ -0.05
CTSA-210ENST00000606000 TMEM179Q6ZVK1 233 aa14.74□□□□□ -0.05
CTSA-210ENST00000606000 SIAH1Q8IUQ4 282 aa14.74□□□□□ -0.05
CTSA-210ENST00000606000 AMOTL1Q8IY63 956 aa14.74□□□□□ -0.05
CTSA-210ENST00000606000 PAGR1Q9BTK6 254 aa14.74□□□□□ -0.05
CTSA-210ENST00000606000 RLFQ13129 1914 aa14.74□□□□□ -0.05
CTSA-210ENST00000606000 ROBO3Q96MS0 1386 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 FOXP2O15409 715 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 ELNP15502 786 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 EN2P19622 333 aaPredicted RBP14.73□□□□□ -0.05
CTSA-210ENST00000606000 HOXD10P28358 340 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 GRK4P32298 578 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 TDO2P48775 406 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 ICA1Q05084 483 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 Q3C1V9 767 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 SBK1Q52WX2 424 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 CHD1LQ86WJ1 897 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 RPAP3Q9H6T3 665 aaPredicted RBP14.73□□□□□ -0.05
CTSA-210ENST00000606000 RBPJLQ9UBG7 517 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 MORF4L1Q9UBU8 362 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 TAOK2Q9UL54 1235 aa14.73□□□□□ -0.05
CTSA-210ENST00000606000 CENPFP49454 3210 aa14.72□□□□□ -0.05
CTSA-210ENST00000606000 DOCK3Q8IZD9 2030 aa14.72□□□□□ -0.05
CTSA-210ENST00000606000 CNMDO75829 334 aa14.72□□□□□ -0.05
CTSA-210ENST00000606000 APPP05067 770 aa14.72□□□□□ -0.05
CTSA-210ENST00000606000 USP14P54578 494 aa14.72□□□□□ -0.05
CTSA-210ENST00000606000 NUCB1Q02818 461 aa14.72□□□□□ -0.05
CTSA-210ENST00000606000 CATSPERGQ6ZRH7 1159 aa14.72□□□□□ -0.05
CTSA-210ENST00000606000 NBPF11Q86T75 865 aa14.72□□□□□ -0.05
CTSA-210ENST00000606000 IFNL3Q8IZI9 196 aa14.72□□□□□ -0.05
CTSA-210ENST00000606000 EVI5LQ96CN4 794 aa14.72□□□□□ -0.05
CTSA-210ENST00000606000 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.72□□□□□ -0.05
CTSA-210ENST00000606000 A0A0D9SFI3 127 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 USP17L15C9J2P7 530 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 USP17L13C9JLJ4 530 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 USP17L11C9JVI0 530 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 USP17L18D6R9N7 530 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 USP17L22D6RA61 530 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 USP17L17D6RBQ6 530 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 USP17L19D6RCP7 530 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 USP17L20D6RJB6 530 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 PRDM1O75626 825 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 GNAT2P19087 354 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 RASA1P20936 1047 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 USP17L24Q0WX57 530 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 LRRFIP1Q32MZ4 808 aaKnown RBP14.71□□□□□ -0.05
CTSA-210ENST00000606000 VPS53Q5VIR6 699 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 GIMAP6Q6P9H5 292 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 PLEKHM2Q8IWE5 1019 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 SPICE1Q8N0Z3 855 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 FAM227BQ96M60 508 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 PORCNQ9H237 461 aa14.71□□□□□ -0.05
CTSA-210ENST00000606000 SPDYE16A6NNV3 312 aaPredicted RBP14.7□□□□□ -0.06
CTSA-210ENST00000606000 PATL2C9JE40 543 aaKnown RBP14.7□□□□□ -0.06
CTSA-210ENST00000606000 ADCY3O60266 1144 aa14.7□□□□□ -0.06
CTSA-210ENST00000606000 EEF2P13639 858 aaKnown RBP14.7□□□□□ -0.06
CTSA-210ENST00000606000 ERVK-9P63128 1117 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms