RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 EMILIN3Q9NT22 766 aa17.25■□□□□ 0.35
TUBE1-208ENST00000604743 PTPN22Q9Y2R2 807 aa17.25■□□□□ 0.35
TUBE1-208ENST00000604743 FMNL1O95466 1100 aaPredicted RBP17.24■□□□□ 0.35
TUBE1-208ENST00000604743 BCRP11274 1271 aa17.24■□□□□ 0.35
TUBE1-208ENST00000604743 PSMC4P43686 418 aa17.24■□□□□ 0.35
TUBE1-208ENST00000604743 IRX3P78415 501 aaPredicted RBP17.24■□□□□ 0.35
TUBE1-208ENST00000604743 GIMAP6Q6P9H5 292 aa17.24■□□□□ 0.35
TUBE1-208ENST00000604743 C16orf86Q6ZW13 317 aa17.24■□□□□ 0.35
TUBE1-208ENST00000604743 ANKRD13CQ8N6S4 541 aa17.24■□□□□ 0.35
TUBE1-208ENST00000604743 ASCC2Q9H1I8 757 aaPredicted RBP17.24■□□□□ 0.35
TUBE1-208ENST00000604743 CTGFP29279 349 aa17.23■□□□□ 0.35
TUBE1-208ENST00000604743 SBK1Q52WX2 424 aa17.23■□□□□ 0.35
TUBE1-208ENST00000604743 TMEM179Q6ZVK1 233 aa17.23■□□□□ 0.35
TUBE1-208ENST00000604743 CLEC10AQ8IUN9 316 aa17.23■□□□□ 0.35
TUBE1-208ENST00000604743 FAM227BQ96M60 508 aa17.23■□□□□ 0.35
TUBE1-208ENST00000604743 NACAP1Q9BZK3 213 aa17.23■□□□□ 0.35
TUBE1-208ENST00000604743 DOCK3Q8IZD9 2030 aa17.23■□□□□ 0.35
TUBE1-208ENST00000604743 USP14P54578 494 aa17.22■□□□□ 0.35
TUBE1-208ENST00000604743 CCDC17Q96LX7 622 aa17.22■□□□□ 0.35
TUBE1-208ENST00000604743 NAPBQ9H115 298 aa17.22■□□□□ 0.35
TUBE1-208ENST00000604743 OSBPL3Q9H4L5 887 aa17.22■□□□□ 0.35
TUBE1-208ENST00000604743 MKNK2Q9HBH9 465 aa17.22■□□□□ 0.35
TUBE1-208ENST00000604743 A0A0D9SFI3 127 aa17.21■□□□□ 0.35
TUBE1-208ENST00000604743 PDE4AP27815 886 aa17.21■□□□□ 0.35
TUBE1-208ENST00000604743 SOX10P56693 466 aa17.21■□□□□ 0.35
TUBE1-208ENST00000604743 ATP2B2Q01814 1243 aa17.21■□□□□ 0.35
TUBE1-208ENST00000604743 NMIQ13287 307 aaPredicted RBP17.21■□□□□ 0.35
TUBE1-208ENST00000604743 TRIM47Q96LD4 638 aa17.21■□□□□ 0.35
TUBE1-208ENST00000604743 P2RX7Q99572 595 aaKnown RBP17.21■□□□□ 0.35
TUBE1-208ENST00000604743 KIAA1683Q9H0B3 1180 aa17.21■□□□□ 0.35
TUBE1-208ENST00000604743 HELLSQ9NRZ9 838 aa17.21■□□□□ 0.35
TUBE1-208ENST00000604743 TAOK2Q9UL54 1235 aa17.21■□□□□ 0.35
TUBE1-208ENST00000604743 PTCH2Q9Y6C5 1203 aa17.21■□□□□ 0.35
TUBE1-208ENST00000604743 A0A1W2PRG0 241 aa17.2■□□□□ 0.34
TUBE1-208ENST00000604743 PEX10O60683 326 aa17.2■□□□□ 0.34
TUBE1-208ENST00000604743 PRDM1O75626 825 aa17.2■□□□□ 0.34
TUBE1-208ENST00000604743 HOXA7P31268 230 aaPredicted RBP17.2■□□□□ 0.34
TUBE1-208ENST00000604743 FCGRTP55899 365 aa17.2■□□□□ 0.34
TUBE1-208ENST00000604743 ICA1Q05084 483 aa17.2■□□□□ 0.34
TUBE1-208ENST00000604743 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
TUBE1-208ENST00000604743 VPS53Q5VIR6 699 aa17.2■□□□□ 0.34
TUBE1-208ENST00000604743 ARHGEF10LQ9HCE6 1279 aa17.2■□□□□ 0.34
TUBE1-208ENST00000604743 GNRH1P01148 92 aa17.19■□□□□ 0.34
TUBE1-208ENST00000604743 VCAM1P19320 739 aa17.19■□□□□ 0.34
TUBE1-208ENST00000604743 SDSP20132 328 aa17.19■□□□□ 0.34
TUBE1-208ENST00000604743 RASA1P20936 1047 aa17.19■□□□□ 0.34
TUBE1-208ENST00000604743 HOXD10P28358 340 aa17.19■□□□□ 0.34
TUBE1-208ENST00000604743 GCLCP48506 637 aaPredicted RBP17.19■□□□□ 0.34
TUBE1-208ENST00000604743 HERVK_113P62684 666 aa17.19■□□□□ 0.34
TUBE1-208ENST00000604743 C12orf42Q96LP6 360 aa17.19■□□□□ 0.34
TUBE1-208ENST00000604743 MYPNQ86TC9 1320 aa17.19■□□□□ 0.34
TUBE1-208ENST00000604743 MYH4Q9Y623 1939 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 USP17L15C9J2P7 530 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 USP17L13C9JLJ4 530 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 USP17L11C9JVI0 530 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 USP17L18D6R9N7 530 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 USP17L22D6RA61 530 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 USP17L17D6RBQ6 530 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 USP17L19D6RCP7 530 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 USP17L20D6RJB6 530 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 TNPO2O14787 897 aaKnown RBP17.18■□□□□ 0.34
TUBE1-208ENST00000604743 RAD21O60216 631 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 PPARAQ07869 468 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 USP17L24Q0WX57 530 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 FAM110CQ1W6H9 321 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 ZNF444Q8N0Y2 327 aaPredicted RBP17.18■□□□□ 0.34
TUBE1-208ENST00000604743 PAGR1Q9BTK6 254 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 RPAP3Q9H6T3 665 aaPredicted RBP17.18■□□□□ 0.34
TUBE1-208ENST00000604743 SRRDQ9UH36 339 aa17.18■□□□□ 0.34
TUBE1-208ENST00000604743 ROBO3Q96MS0 1386 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 FOXP2O15409 715 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 MYCP01106 439 aaPredicted RBP17.17■□□□□ 0.34
TUBE1-208ENST00000604743 SLC3A2P08195 630 aaKnown RBP17.17■□□□□ 0.34
TUBE1-208ENST00000604743 EEF2P13639 858 aaKnown RBP17.17■□□□□ 0.34
TUBE1-208ENST00000604743 CTDSPL2Q05D32 466 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 SLC9C1Q4G0N8 1177 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 CWC27Q6UX04 472 aaKnown RBP17.17■□□□□ 0.34
TUBE1-208ENST00000604743 CATSPERGQ6ZRH7 1159 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 ZNF589Q86UQ0 364 aaPredicted RBP17.17■□□□□ 0.34
TUBE1-208ENST00000604743 SIAH1Q8IUQ4 282 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 SPICE1Q8N0Z3 855 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 RAET1EQ8TD07 263 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 KANSL2Q9H9L4 492 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 ZNF287Q9HBT7 754 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 DIAPH3Q9NSV4 1193 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 GABRQQ9UN88 632 aa17.17■□□□□ 0.34
TUBE1-208ENST00000604743 GREB1LQ9C091 1923 aaPredicted RBP17.16■□□□□ 0.34
TUBE1-208ENST00000604743 HTTP42858 3142 aa17.16■□□□□ 0.34
TUBE1-208ENST00000604743 PRMT2P55345 433 aa17.16■□□□□ 0.34
TUBE1-208ENST00000604743 PRKCZQ05513 592 aa17.16■□□□□ 0.34
TUBE1-208ENST00000604743 PDE4BQ07343 736 aa17.16■□□□□ 0.34
TUBE1-208ENST00000604743 KIAA1755Q5JYT7 1200 aa17.16■□□□□ 0.34
TUBE1-208ENST00000604743 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
TUBE1-208ENST00000604743 SH3TC2Q8TF17 1288 aa17.16■□□□□ 0.34
TUBE1-208ENST00000604743 TANGO6Q9C0B7 1094 aa17.16■□□□□ 0.34
TUBE1-208ENST00000604743 SH2D4AQ9H788 454 aa17.16■□□□□ 0.34
TUBE1-208ENST00000604743 CCDC171Q6TFL3 1326 aa17.16■□□□□ 0.34
TUBE1-208ENST00000604743 FAM47AQ5JRC9 791 aa17.15■□□□□ 0.34
TUBE1-208ENST00000604743 TTC22Q5TAA0 569 aa17.15■□□□□ 0.34
TUBE1-208ENST00000604743 NBPF11Q86T75 865 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms