RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 INTS4Q96HW7 963 aaKnown RBP21.75■■□□□ 1.07
SSBP4-212ENST00000601919 MTMR4Q9NYA4 1195 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 BRPF3Q9ULD4 1205 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 STX8Q9UNK0 236 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.75■■□□□ 1.07
SSBP4-212ENST00000601919 IGKV6D-41A0A0C4DH26 115 aa21.74■■□□□ 1.07
SSBP4-212ENST00000601919 TTLL1O95922 423 aa21.74■■□□□ 1.07
SSBP4-212ENST00000601919 PPP2R5BQ15173 497 aa21.74■■□□□ 1.07
SSBP4-212ENST00000601919 ZNF654Q8IZM8 581 aa21.74■■□□□ 1.07
SSBP4-212ENST00000601919 DDAH1O94760 285 aa21.73■■□□□ 1.07
SSBP4-212ENST00000601919 SLURP2P0DP57 97 aa21.73■■□□□ 1.07
SSBP4-212ENST00000601919 TOP1P11387 765 aaKnown RBP21.73■■□□□ 1.07
SSBP4-212ENST00000601919 NOVP48745 357 aa21.73■■□□□ 1.07
SSBP4-212ENST00000601919 SLC4A3P48751 1232 aa21.73■■□□□ 1.07
SSBP4-212ENST00000601919 STK3Q13188 491 aa21.73■■□□□ 1.07
SSBP4-212ENST00000601919 RCSD1Q6JBY9 416 aa21.73■■□□□ 1.07
SSBP4-212ENST00000601919 LDHDQ86WU2 507 aa21.73■■□□□ 1.07
SSBP4-212ENST00000601919 GTF3C6Q969F1 213 aa21.73■■□□□ 1.07
SSBP4-212ENST00000601919 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.73■■□□□ 1.07
SSBP4-212ENST00000601919 MYH4Q9Y623 1939 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 ATAD5Q96QE3 1844 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 CCDC196A0A1B0GTZ2 297 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 ADM5C9JUS6 153 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 CTNND1O60716 968 aaKnown RBP21.72■■□□□ 1.07
SSBP4-212ENST00000601919 GDF11O95390 407 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 LARGE1O95461 756 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 GH2P01242 217 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 ASNSP08243 561 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 CAP2P40123 477 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 METAP2P50579 478 aaKnown RBP eCLIP21.72■■□□□ 1.071e-6■■■□□ 15.4
SSBP4-212ENST00000601919 USP48Q86UV5 1035 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 CCDC83Q8IWF9 413 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 SENP2Q9HC62 589 aa21.72■■□□□ 1.07
SSBP4-212ENST00000601919 PPP1R12BO60237 982 aaPredicted RBP21.71■■□□□ 1.07
SSBP4-212ENST00000601919 RAB3GAP1Q15042 981 aa21.71■■□□□ 1.07
SSBP4-212ENST00000601919 PRAMEF18Q5VWM3 479 aa21.71■■□□□ 1.07
SSBP4-212ENST00000601919 CPLX2Q6PUV4 134 aaKnown RBP21.71■■□□□ 1.07
SSBP4-212ENST00000601919 MICU3Q86XE3 530 aa21.71■■□□□ 1.07
SSBP4-212ENST00000601919 NECAB1Q8N987 351 aa21.71■■□□□ 1.07
SSBP4-212ENST00000601919 PNMA1Q8ND90 353 aa21.71■■□□□ 1.07
SSBP4-212ENST00000601919 MAP3K14Q99558 947 aa21.71■■□□□ 1.07
SSBP4-212ENST00000601919 TMEM47Q9BQJ4 181 aa21.71■■□□□ 1.07
SSBP4-212ENST00000601919 LLPHQ9BRT6 129 aaKnown RBP21.71■■□□□ 1.07
SSBP4-212ENST00000601919 NYAP2Q9P242 653 aa21.71■■□□□ 1.07
SSBP4-212ENST00000601919 NID2Q14112 1375 aa21.71■■□□□ 1.07
SSBP4-212ENST00000601919 GOLGA8AA7E2F4 631 aa21.7■■□□□ 1.06
SSBP4-212ENST00000601919 PHF20L1A8MW92 1017 aa21.7■■□□□ 1.06
SSBP4-212ENST00000601919 CPLX1O14810 134 aa21.7■■□□□ 1.06
SSBP4-212ENST00000601919 ICA1Q05084 483 aa21.7■■□□□ 1.06
SSBP4-212ENST00000601919 SEPT2Q15019 361 aa21.7■■□□□ 1.06
SSBP4-212ENST00000601919 CWC22Q9HCG8 908 aaKnown RBP21.7■■□□□ 1.06
SSBP4-212ENST00000601919 CLIP2Q9UDT6 1046 aa21.7■■□□□ 1.06
SSBP4-212ENST00000601919 ZNF112Q9UJU3 913 aa21.7■■□□□ 1.06
SSBP4-212ENST00000601919 ZBTB21Q9ULJ3 1066 aa21.7■■□□□ 1.06
SSBP4-212ENST00000601919 SYNPO2Q9UMS6 1093 aa21.7■■□□□ 1.06
SSBP4-212ENST00000601919 CDKL5O76039 1030 aa21.69■■□□□ 1.06
SSBP4-212ENST00000601919 KIF5BP33176 963 aa21.69■■□□□ 1.06
SSBP4-212ENST00000601919 CCT2P78371 535 aaKnown RBP21.69■■□□□ 1.06
SSBP4-212ENST00000601919 SCRN1Q12765 414 aa21.69■■□□□ 1.06
SSBP4-212ENST00000601919 RTN1Q16799 776 aa21.69■■□□□ 1.06
SSBP4-212ENST00000601919 FANCBQ8NB91 859 aa21.69■■□□□ 1.06
SSBP4-212ENST00000601919 CTCFLQ8NI51 663 aaPredicted RBP21.69■■□□□ 1.06
SSBP4-212ENST00000601919 ZNF526Q8TF50 670 aaPredicted RBP21.69■■□□□ 1.06
SSBP4-212ENST00000601919 NUP133Q8WUM0 1156 aa21.69■■□□□ 1.06
SSBP4-212ENST00000601919 CDCA5Q96FF9 252 aa21.69■■□□□ 1.06
SSBP4-212ENST00000601919 ARHGEF10LQ9HCE6 1279 aa21.69■■□□□ 1.06
SSBP4-212ENST00000601919 NMRK2Q9NPI5 230 aa21.69■■□□□ 1.06
SSBP4-212ENST00000601919 RBM28Q9NW13 759 aaKnown RBP21.69■■□□□ 1.06
SSBP4-212ENST00000601919 HPS5Q9UPZ3 1129 aa21.69■■□□□ 1.06
SSBP4-212ENST00000601919 DOCK1Q14185 1865 aa21.69■■□□□ 1.06
SSBP4-212ENST00000601919 ATP2B2Q01814 1243 aa21.68■■□□□ 1.06
SSBP4-212ENST00000601919 TROAPQ12815 778 aa21.68■■□□□ 1.06
SSBP4-212ENST00000601919 RRP1BQ14684 758 aaKnown RBP21.68■■□□□ 1.06
SSBP4-212ENST00000601919 SPRYD3Q8NCJ5 442 aa21.68■■□□□ 1.06
SSBP4-212ENST00000601919 MKL1Q969V6 931 aa21.68■■□□□ 1.06
SSBP4-212ENST00000601919 WRNIP1Q96S55 665 aa21.68■■□□□ 1.06
SSBP4-212ENST00000601919 GLIS2Q9BZE0 524 aaPredicted RBP21.68■■□□□ 1.06
SSBP4-212ENST00000601919 SH2D4AQ9H788 454 aa21.68■■□□□ 1.06
SSBP4-212ENST00000601919 SMC3Q9UQE7 1217 aa21.68■■□□□ 1.06
SSBP4-212ENST00000601919 SSC5DA1L4H1 1573 aa21.67■■□□□ 1.06
SSBP4-212ENST00000601919 EEF2P13639 858 aaKnown RBP21.67■■□□□ 1.06
SSBP4-212ENST00000601919 GUCY1A2P33402 732 aa21.67■■□□□ 1.06
SSBP4-212ENST00000601919 IREB2P48200 963 aaKnown RBP21.67■■□□□ 1.06
SSBP4-212ENST00000601919 KLRG1Q96E93 195 aa21.67■■□□□ 1.06
SSBP4-212ENST00000601919 MYL10Q9BUA6 226 aa21.67■■□□□ 1.06
SSBP4-212ENST00000601919 PICK1Q9NRD5 415 aa21.67■■□□□ 1.06
SSBP4-212ENST00000601919 GNAQP50148 359 aa21.66■■□□□ 1.06
SSBP4-212ENST00000601919 MAP1SQ66K74 1059 aaPredicted RBP21.66■■□□□ 1.06
SSBP4-212ENST00000601919 RAB11FIP4Q86YS3 637 aa21.66■■□□□ 1.06
SSBP4-212ENST00000601919 SCYL3Q8IZE3 742 aa21.66■■□□□ 1.06
SSBP4-212ENST00000601919 FOXD4L1Q9NU39 408 aa21.66■■□□□ 1.06
SSBP4-212ENST00000601919 KIF3AQ9Y496 699 aa21.66■■□□□ 1.06
SSBP4-212ENST00000601919 RXRAP19793 462 aa21.65■■□□□ 1.06
SSBP4-212ENST00000601919 HMGN5P82970 282 aaKnown RBP21.65■■□□□ 1.06
SSBP4-212ENST00000601919 NOL9Q5SY16 702 aaKnown RBP21.65■■□□□ 1.06
SSBP4-212ENST00000601919 CCDC144CPQ8IYA2 1237 aa21.65■■□□□ 1.06
SSBP4-212ENST00000601919 NCOA5Q9HCD5 579 aaKnown RBP21.65■■□□□ 1.06
SSBP4-212ENST00000601919 USP2O75604 605 aaPredicted RBP21.64■■□□□ 1.05
SSBP4-212ENST00000601919 POTEIP0CG38 1075 aa21.64■■□□□ 1.05
SSBP4-212ENST00000601919 POTEJP0CG39 1038 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms