RNA–Protein interactions for RNA: ENST00000598758.5

TGFB1-203, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-203ENST00000598758 MCAMP43121 646 aa11.53□□□□□ -0.56
TGFB1-203ENST00000598758 GSTO1P78417 241 aa11.53□□□□□ -0.56
TGFB1-203ENST00000598758 MVPQ14764 893 aaKnown RBP11.53□□□□□ -0.56
TGFB1-203ENST00000598758 GJC2Q5T442 439 aaPredicted RBP11.53□□□□□ -0.56
TGFB1-203ENST00000598758 MFSD14CQ5VZR4 134 aa11.53□□□□□ -0.56
TGFB1-203ENST00000598758 ANO1Q5XXA6 986 aa11.53□□□□□ -0.56
TGFB1-203ENST00000598758 ADGRA1Q86SQ6 560 aa11.53□□□□□ -0.56
TGFB1-203ENST00000598758 LPAR1Q92633 364 aa11.53□□□□□ -0.56
TGFB1-203ENST00000598758 EDC3Q96F86 508 aaKnown RBP11.53□□□□□ -0.56
TGFB1-203ENST00000598758 PDLIM7Q9NR12 457 aa11.53□□□□□ -0.56
TGFB1-203ENST00000598758 RAI14Q9P0K7 980 aa11.53□□□□□ -0.56
TGFB1-203ENST00000598758 FLT1P17948 1338 aa11.53□□□□□ -0.56
TGFB1-203ENST00000598758 NAV1Q8NEY1 1877 aa11.53□□□□□ -0.56
TGFB1-203ENST00000598758 TRIM43BA6NCK2 446 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 SLC15A5A6NIM6 579 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 HOXC6P09630 235 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 CYBAP13498 195 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 PTPREP23469 700 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 ARID4AP29374 1257 aaPredicted RBP11.52□□□□□ -0.57
TGFB1-203ENST00000598758 CNGA1P29973 690 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 EPHB4P54760 987 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 SMAD3P84022 425 aaKnown RBP11.52□□□□□ -0.57
TGFB1-203ENST00000598758 GRB14Q14449 540 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 SNX17Q15036 470 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 TRIM60Q495X7 471 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 SLC39A5Q6ZMH5 540 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 CCAR1Q8IX12 1150 aaKnown RBP11.52□□□□□ -0.57
TGFB1-203ENST00000598758 GTF3C2Q8WUA4 911 aaPredicted RBP11.52□□□□□ -0.57
TGFB1-203ENST00000598758 TRIM43Q96BQ3 446 aaPredicted RBP11.52□□□□□ -0.57
TGFB1-203ENST00000598758 MEIS3Q99687 375 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 PRDM5Q9NQX1 630 aaPredicted RBP11.52□□□□□ -0.57
TGFB1-203ENST00000598758 AATFQ9NY61 560 aaKnown RBP eCLIP11.52□□□□□ -0.57
TGFB1-203ENST00000598758 BTBD7Q9P203 1132 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 PRKAG2Q9UGJ0 569 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 PALD1Q9ULE6 856 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 RABGAP1Q9Y3P9 1069 aa11.52□□□□□ -0.57
TGFB1-203ENST00000598758 TCF20Q9UGU0 1960 aaKnown RBP11.51□□□□□ -0.57
TGFB1-203ENST00000598758 ITGB8P26012 769 aa11.51□□□□□ -0.57
TGFB1-203ENST00000598758 ZYXQ15942 572 aaKnown RBP11.51□□□□□ -0.57
TGFB1-203ENST00000598758 WDR78Q5VTH9 848 aa11.51□□□□□ -0.57
TGFB1-203ENST00000598758 USP17L2Q6R6M4 530 aa11.51□□□□□ -0.57
TGFB1-203ENST00000598758 TGFBRAP1Q8WUH2 860 aa11.51□□□□□ -0.57
TGFB1-203ENST00000598758 C12orf42Q96LP6 360 aa11.51□□□□□ -0.57
TGFB1-203ENST00000598758 DHX36Q9H2U1 1008 aaKnown RBP11.51□□□□□ -0.57
TGFB1-203ENST00000598758 SAP30BPQ9UHR5 308 aaKnown RBP11.51□□□□□ -0.57
TGFB1-203ENST00000598758 MSCO60682 206 aa11.5□□□□□ -0.57
TGFB1-203ENST00000598758 GH2P01242 217 aa11.5□□□□□ -0.57
TGFB1-203ENST00000598758 ATP2B2Q01814 1243 aa11.5□□□□□ -0.57
TGFB1-203ENST00000598758 GRIN2CQ14957 1233 aa11.5□□□□□ -0.57
TGFB1-203ENST00000598758 CRACR2BQ8N4Y2 399 aaPredicted RBP11.5□□□□□ -0.57
TGFB1-203ENST00000598758 NEUROD6Q96NK8 337 aa11.5□□□□□ -0.57
TGFB1-203ENST00000598758 CWC22Q9HCG8 908 aaKnown RBP11.5□□□□□ -0.57
TGFB1-203ENST00000598758 AKAP2Q9Y2D5 859 aa11.5□□□□□ -0.57
TGFB1-203ENST00000598758 SPDYE16A6NNV3 312 aaPredicted RBP11.49□□□□□ -0.57
TGFB1-203ENST00000598758 USP17L15C9J2P7 530 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 USP17L13C9JLJ4 530 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 USP17L11C9JVI0 530 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 USP17L18D6R9N7 530 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 USP17L22D6RA61 530 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 USP17L17D6RBQ6 530 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 USP17L19D6RCP7 530 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 USP17L20D6RJB6 530 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 VCAM1P19320 739 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 PPP4CP60510 307 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 DYNLL1P63167 89 aaKnown RBP11.49□□□□□ -0.57
TGFB1-203ENST00000598758 CCNA1P78396 465 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 USP17L24Q0WX57 530 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 CATSPERGQ6ZRH7 1159 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 FOXP4Q8IVH2 680 aaPredicted RBP11.49□□□□□ -0.57
TGFB1-203ENST00000598758 FAM9BQ8IZU0 186 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 ACER1Q8TDN7 264 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 FERMT2Q96AC1 680 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 SNRKQ9NRH2 765 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 SMC4Q9NTJ3 1288 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 GINM1Q9NU53 330 aa11.49□□□□□ -0.57
TGFB1-203ENST00000598758 MCM3APO60318 1980 aa11.48□□□□□ -0.57
TGFB1-203ENST00000598758 TNFRSF10AO00220 468 aa11.48□□□□□ -0.57
TGFB1-203ENST00000598758 SRGAP3O43295 1099 aa11.48□□□□□ -0.57
TGFB1-203ENST00000598758 GLRX3O76003 335 aaKnown RBP11.48□□□□□ -0.57
TGFB1-203ENST00000598758 ADCYAP1R1P41586 468 aa11.48□□□□□ -0.57
TGFB1-203ENST00000598758 TLE2Q04725 743 aa11.48□□□□□ -0.57
TGFB1-203ENST00000598758 ALDH1L2Q3SY69 923 aa11.48□□□□□ -0.57
TGFB1-203ENST00000598758 TJAP1Q5JTD0 557 aa11.48□□□□□ -0.57
TGFB1-203ENST00000598758 PRAMEF19Q5SWL8 479 aa11.48□□□□□ -0.57
TGFB1-203ENST00000598758 NAA16Q6N069 864 aaPredicted RBP11.48□□□□□ -0.57
TGFB1-203ENST00000598758 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
TGFB1-203ENST00000598758 SYMPKQ92797 1274 aaKnown RBP11.48□□□□□ -0.57
TGFB1-203ENST00000598758 LRP2BPQ9P2M1 347 aa11.48□□□□□ -0.57
TGFB1-203ENST00000598758 TMEM265A0A087WTH1 108 aa11.47□□□□□ -0.57
TGFB1-203ENST00000598758 KBTBD13C9JR72 458 aa11.47□□□□□ -0.57
TGFB1-203ENST00000598758 COBLO75128 1261 aa11.47□□□□□ -0.57
TGFB1-203ENST00000598758 ADORA2AP29274 412 aa11.47□□□□□ -0.57
TGFB1-203ENST00000598758 CACNB1Q02641 598 aaPredicted RBP11.47□□□□□ -0.57
TGFB1-203ENST00000598758 MTX1Q13505 466 aa11.47□□□□□ -0.57
TGFB1-203ENST00000598758 LRRC41Q15345 812 aa11.47□□□□□ -0.57
TGFB1-203ENST00000598758 FAM47AQ5JRC9 791 aa11.47□□□□□ -0.57
TGFB1-203ENST00000598758 OLFML2BQ68BL8 750 aa11.47□□□□□ -0.57
TGFB1-203ENST00000598758 TATDN1Q6P1N9 297 aa11.47□□□□□ -0.57
TGFB1-203ENST00000598758 RNPC3Q96LT9 517 aaKnown RBP11.47□□□□□ -0.57
TGFB1-203ENST00000598758 FEZ1Q99689 392 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms