RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 CERKLQ49MI3 558 aaPredicted RBP12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 WDR78Q5VTH9 848 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 TATDN1Q6P1N9 297 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 AACSQ86V21 672 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 ERC1Q8IUD2 1116 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 PORCNQ9H237 461 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 OGDHLQ9ULD0 1010 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 POLR3DP05423 398 aaPredicted RBP12.84□□□□□ -0.35
CHMP2A-202ENST00000596708 SYN1P17600 705 aa12.84□□□□□ -0.35
CHMP2A-202ENST00000596708 USP14P54578 494 aa12.84□□□□□ -0.35
CHMP2A-202ENST00000596708 CCNA1P78396 465 aa12.84□□□□□ -0.35
CHMP2A-202ENST00000596708 CACNB2Q08289 660 aaPredicted RBP12.84□□□□□ -0.35
CHMP2A-202ENST00000596708 CCL14Q16627 93 aa12.84□□□□□ -0.35
CHMP2A-202ENST00000596708 MAP3K21Q5TCX8 1036 aa12.84□□□□□ -0.35
CHMP2A-202ENST00000596708 CEP85Q6P2H3 762 aa12.84□□□□□ -0.35
CHMP2A-202ENST00000596708 BCL11AQ9H165 835 aa12.84□□□□□ -0.35
CHMP2A-202ENST00000596708 SMCHD1A6NHR9 2005 aa12.84□□□□□ -0.35
CHMP2A-202ENST00000596708 SZT2Q5T011 3432 aa12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 GLRX3O76003 335 aaKnown RBP12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 CCND3P30281 292 aaPredicted RBP12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 MNX1P50219 401 aaPredicted RBP12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 HSP90AB4PQ58FF6 505 aa12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 MORN1Q5T089 497 aa12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 CATSPERGQ6ZRH7 1159 aa12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 USP6NLQ92738 828 aa12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 EDC3Q96F86 508 aaKnown RBP12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 LRCH3Q96II8 777 aa12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 C12orf42Q96LP6 360 aa12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 EHD4Q9H223 541 aa12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 IL1RAPL2Q9NP60 686 aa12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 RABGAP1Q9Y3P9 1069 aa12.83□□□□□ -0.36
CHMP2A-202ENST00000596708 MAGEB6P1A0A0J9YX57 407 aa12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 SOX1O00570 391 aaPredicted RBP12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 BMP8BP34820 402 aa12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 PLCD1P51178 756 aa12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 TTF1Q15361 905 aaPredicted RBP12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 TMED8Q6PL24 325 aaPredicted RBP12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 RHPN1Q8TCX5 695 aa12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 ACER1Q8TDN7 264 aa12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 PANK1Q8TE04 598 aa12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 APBA2Q99767 749 aa12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 GDF15Q99988 308 aa12.82□□□□□ -0.36
CHMP2A-202ENST00000596708 COL11A1P12107 1806 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 APBB1O00213 710 aa12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 MPHOSPH10O00566 681 aaKnown RBP12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 CNMDO75829 334 aa12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 VCAM1P19320 739 aa12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 SLC9C2Q5TAH2 1124 aa12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 MFSD14CQ5VZR4 134 aa12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 CLASRPQ8N2M8 674 aaKnown RBP12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 RIOK1Q9BRS2 568 aaKnown RBP12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 CRNKL1Q9BZJ0 848 aaKnown RBP12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 KIAA1683Q9H0B3 1180 aa12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 RPAP3Q9H6T3 665 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 MCM9Q9NXL9 1143 aa12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 IVNS1ABPQ9Y6Y0 642 aa12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 RLFQ13129 1914 aa12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 PFASO15067 1338 aa12.81□□□□□ -0.36
CHMP2A-202ENST00000596708 SLC15A5A6NIM6 579 aa12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 PTPREP23469 700 aa12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 CNGA1P29973 690 aa12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 SHMT1P34896 483 aa12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 MAGEA10P43363 369 aaPredicted RBP12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 ATP2B2Q01814 1243 aa12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 SEPT2Q15019 361 aa12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 LHX8Q68G74 356 aa12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 DNAJC2Q99543 621 aaKnown RBP12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 BTBD7Q9P203 1132 aa12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 PARP14Q460N5 1801 aa12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 PLXNA1Q9UIW2 1896 aa12.8□□□□□ -0.36
CHMP2A-202ENST00000596708 GOLIM4O00461 696 aa12.79□□□□□ -0.36
CHMP2A-202ENST00000596708 IFIT2P09913 472 aaKnown RBP12.79□□□□□ -0.36
CHMP2A-202ENST00000596708 PDE6AP16499 860 aa12.79□□□□□ -0.36
CHMP2A-202ENST00000596708 GUCY1A2P33402 732 aa12.79□□□□□ -0.36
CHMP2A-202ENST00000596708 MIER1Q8N108 512 aa12.79□□□□□ -0.36
CHMP2A-202ENST00000596708 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
CHMP2A-202ENST00000596708 SDR42E1Q8WUS8 393 aa12.79□□□□□ -0.36
CHMP2A-202ENST00000596708 UBE2OQ9C0C9 1292 aaKnown RBP12.79□□□□□ -0.36
CHMP2A-202ENST00000596708 FLRT1Q9NZU1 646 aa12.79□□□□□ -0.36
CHMP2A-202ENST00000596708 ZNF532Q9HCE3 1301 aa12.79□□□□□ -0.36
CHMP2A-202ENST00000596708 SPDYE16A6NNV3 312 aaPredicted RBP12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 MS4A1P11836 297 aa12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 COL6A1P12109 1028 aa12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 EVX2Q03828 476 aa12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 GABPAQ06546 454 aa12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 COG2Q14746 738 aa12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 LBX2Q6XYB7 198 aa12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 DPP9Q86TI2 863 aa12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 NPLOC4Q8TAT6 608 aa12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 KIF1BPQ96EK5 621 aa12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 SENP6Q9GZR1 1112 aaPredicted RBP12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 HOXC10Q9NYD6 342 aa12.78□□□□□ -0.36
CHMP2A-202ENST00000596708 HMMRO75330 724 aa12.77□□□□□ -0.37
CHMP2A-202ENST00000596708 GRB14Q14449 540 aa12.77□□□□□ -0.37
CHMP2A-202ENST00000596708 LRRC26Q2I0M4 334 aa12.77□□□□□ -0.37
CHMP2A-202ENST00000596708 RPAP2Q8IXW5 612 aaPredicted RBP12.77□□□□□ -0.37
CHMP2A-202ENST00000596708 TDHQ8IZJ6 230 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms