RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 TMEM57Q8N5G2 664 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 MARCH10Q8NA82 808 aaPredicted RBP4.96□□□□□ -1.62
LRIT3-202ENST00000594814 KLHL23Q8NBE8 558 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 SPC24Q8NBT2 197 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 ZFAND2BQ8WV99 257 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 LEO1Q8WVC0 666 aaPredicted RBP4.96□□□□□ -1.62
LRIT3-202ENST00000594814 FAXDC2Q96IV6 333 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 PPP1R13BQ96KQ4 1090 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 OSBPL9Q96SU4 736 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 SPC25Q9HBM1 224 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 WDR70Q9NW82 654 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 ZNF232Q9UNY5 417 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 NSFL1CQ9UNZ2 370 aaKnown RBP4.96□□□□□ -1.62
LRIT3-202ENST00000594814 TBC1D2BQ9UPU7 963 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 USP16Q9Y5T5 823 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 OVOS2A0A0G2JMS6 1433 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 SLIT2O94813 1529 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 TARSL2A2RTX5 802 aaKnown RBP4.96□□□□□ -1.62
LRIT3-202ENST00000594814 CCDC69A6NI79 296 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 IMPDH2P12268 514 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 EIF4A1P60842 406 aaKnown RBP4.96□□□□□ -1.62
LRIT3-202ENST00000594814 SF3A1Q15459 793 aaKnown RBP4.96□□□□□ -1.62
LRIT3-202ENST00000594814 CCDC144BQ3MJ40 725 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 LRP10Q7Z4F1 713 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 PARP9Q8IXQ6 854 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 ZGPATQ8N5A5 531 aaKnown RBP4.96□□□□□ -1.62
LRIT3-202ENST00000594814 DRAXINQ8NBI3 349 aaPredicted RBP4.96□□□□□ -1.62
LRIT3-202ENST00000594814 GTF3C6Q969F1 213 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 NAA15Q9BXJ9 866 aaKnown RBP4.96□□□□□ -1.62
LRIT3-202ENST00000594814 ASAP1Q9ULH1 1129 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 LIMCH1Q9UPQ0 1083 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 ADAMTS7Q9UKP4 1686 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 QSER1Q2KHR3 1735 aa4.96□□□□□ -1.62
LRIT3-202ENST00000594814 H7C1W4 665 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 ARHGAP6O43182 974 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 AHCYL1O43865 530 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 LUC7L3O95232 432 aaKnown RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 LDHCP07864 332 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 GSPT1P15170 499 aaKnown RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 GNALP38405 381 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 ZNF165P49910 485 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 FAM98CQ17RN3 349 aaKnown RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 LONRF2Q1L5Z9 754 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 TWISTNBQ3B726 338 aaPredicted RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 CRELD2Q6UXH1 353 aaPredicted RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 MFN1Q8IWA4 741 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 ELOA2Q8IYF1 753 aaPredicted RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 CEP57L1Q8IYX8 460 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 CCDC26Q8TAB7 109 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 AFAP1L1Q8TED9 768 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 TRPV5Q9NQA5 729 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 STAP2Q9UGK3 403 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 SPATA31A1Q5TZJ5 1347 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 SIPA1L3O60292 1781 aaPredicted RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 PXDNLA1KZ92 1463 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 HEG1Q9ULI3 1381 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 TMEM110-MUSTN1A8MSY1 372 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 IKBKBO14920 756 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 KIAA0754O94854 1291 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 SNUPNO95149 360 aaKnown RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 SFPQP23246 707 aaKnown RBP eCLIP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 INPP5BP32019 993 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 TAGLNQ01995 201 aaKnown RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 POU5F1BQ06416 359 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 WHAMMP3Q1A5X7 153 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 ERCC6LQ2NKX8 1250 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 ANKRD39Q53RE8 183 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 CMPK2Q5EBM0 449 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 AKAP4Q5JQC9 854 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 CDCA2Q69YH5 1023 aaPredicted RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 SIRT2Q8IXJ6 389 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 STAG2Q8N3U4 1231 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 PIGBQ92521 554 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 ZNF496Q96IT1 587 aaPredicted RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 RPS6KC1Q96S38 1066 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 CFAP45Q9UL16 551 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 MRFAP1Q9Y605 127 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 U3KPZ7 1027 aaPredicted RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 GOLGA6L10A6NI86 522 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 RTN2O75298 545 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 PPFIA2O75334 1257 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 CAPN15O75808 1086 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 PECAM1P16284 738 aaPredicted RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 HSPA4P34932 840 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 NEK4P51957 841 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 EVCP57679 992 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 GPSM2P81274 684 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 SFSWAPQ12872 951 aaKnown RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 PPFIA1Q13136 1202 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 IQCB1Q15051 598 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 TAF7Q15545 349 aaPredicted RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 HDGFL1Q5TGJ6 251 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 VPS53Q5VIR6 699 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 CCSAPQ6IQ19 270 aaPredicted RBP4.95□□□□□ -1.62
LRIT3-202ENST00000594814 TMEM151BQ8IW70 566 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 ACSBG1Q96GR2 724 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 ESYT1Q9BSJ8 1104 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 TMX1Q9H3N1 280 aa4.95□□□□□ -1.62
LRIT3-202ENST00000594814 LCMT1Q9UIC8 334 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms