RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 USP17L10C9JJH3 530 aa25.46■■□□□ 1.67
RETREG3-204ENST00000586796 ALDH1A1P00352 501 aa25.46■■□□□ 1.67
RETREG3-204ENST00000586796 BACE1P56817 501 aa25.46■■□□□ 1.67
RETREG3-204ENST00000586796 ATP2B2Q01814 1243 aa25.46■■□□□ 1.67
RETREG3-204ENST00000586796 IMMTQ16891 758 aaKnown RBP25.46■■□□□ 1.67
RETREG3-204ENST00000586796 RRP12Q5JTH9 1297 aaKnown RBP25.46■■□□□ 1.67
RETREG3-204ENST00000586796 MYH8P13535 1937 aa25.45■■□□□ 1.67
RETREG3-204ENST00000586796 ICA1Q05084 483 aa25.45■■□□□ 1.66
RETREG3-204ENST00000586796 SAGE1Q9NXZ1 904 aa25.45■■□□□ 1.66
RETREG3-204ENST00000586796 TMOD4Q9NZQ9 345 aa25.45■■□□□ 1.66
RETREG3-204ENST00000586796 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.45■■□□□ 1.66
RETREG3-204ENST00000586796 PDHXO00330 501 aa25.44■■□□□ 1.66
RETREG3-204ENST00000586796 RANBP6O60518 1105 aaKnown RBP25.44■■□□□ 1.66
RETREG3-204ENST00000586796 TSPY3P0CV98 308 aa25.44■■□□□ 1.66
RETREG3-204ENST00000586796 TSPY8P0CW00 308 aa25.44■■□□□ 1.66
RETREG3-204ENST00000586796 CTCFP49711 727 aaPredicted RBP25.44■■□□□ 1.66
RETREG3-204ENST00000586796 TFAP4Q01664 338 aa25.44■■□□□ 1.66
RETREG3-204ENST00000586796 GPAT2Q6NUI2 795 aa25.44■■□□□ 1.66
RETREG3-204ENST00000586796 ANKRD23Q86SG2 305 aa25.44■■□□□ 1.66
RETREG3-204ENST00000586796 TBC1D10CQ8IV04 446 aa25.44■■□□□ 1.66
RETREG3-204ENST00000586796 NBPF3Q9H094 633 aa25.44■■□□□ 1.66
RETREG3-204ENST00000586796 ANO2Q9NQ90 1003 aa25.44■■□□□ 1.66
RETREG3-204ENST00000586796 PCNTO95613 3336 aa25.44■■□□□ 1.66
RETREG3-204ENST00000586796 TSPY2A6NKD2 308 aa25.43■■□□□ 1.66
RETREG3-204ENST00000586796 C19orf81C9J6K1 198 aa25.43■■□□□ 1.66
RETREG3-204ENST00000586796 HSPA8P11142 646 aaKnown RBP25.43■■□□□ 1.66
RETREG3-204ENST00000586796 LBX1P52954 281 aa25.43■■□□□ 1.66
RETREG3-204ENST00000586796 TAF1CQ15572 869 aaPredicted RBP25.43■■□□□ 1.66
RETREG3-204ENST00000586796 AKNAD1Q5T1N1 836 aa25.43■■□□□ 1.66
RETREG3-204ENST00000586796 MFSD6Q6ZSS7 791 aa25.43■■□□□ 1.66
RETREG3-204ENST00000586796 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.43■■□□□ 1.66
RETREG3-204ENST00000586796 R3HDMLQ9H3Y0 253 aa25.43■■□□□ 1.66
RETREG3-204ENST00000586796 KANSL2Q9H9L4 492 aa25.43■■□□□ 1.66
RETREG3-204ENST00000586796 U3KPZ7 1027 aaPredicted RBP25.43■■□□□ 1.66
RETREG3-204ENST00000586796 A0A1W2PRG0 241 aa25.42■■□□□ 1.66
RETREG3-204ENST00000586796 EEF2P13639 858 aaKnown RBP25.42■■□□□ 1.66
RETREG3-204ENST00000586796 SH3D19Q5HYK7 790 aa25.42■■□□□ 1.66
RETREG3-204ENST00000586796 TREML2Q5T2D2 321 aa25.42■■□□□ 1.66
RETREG3-204ENST00000586796 USP17L2Q6R6M4 530 aa25.42■■□□□ 1.66
RETREG3-204ENST00000586796 ARHGEF10LQ9HCE6 1279 aa25.42■■□□□ 1.66
RETREG3-204ENST00000586796 CRHR2Q13324 411 aa25.41■■□□□ 1.66
RETREG3-204ENST00000586796 SIAH1Q8IUQ4 282 aa25.41■■□□□ 1.66
RETREG3-204ENST00000586796 PROCA1Q8NCQ7 364 aaPredicted RBP25.41■■□□□ 1.66
RETREG3-204ENST00000586796 STAG1Q8WVM7 1258 aa25.41■■□□□ 1.66
RETREG3-204ENST00000586796 LSG1Q9H089 658 aaKnown RBP25.41■■□□□ 1.66
RETREG3-204ENST00000586796 RNF41Q9H4P4 317 aaPredicted RBP25.41■■□□□ 1.66
RETREG3-204ENST00000586796 EMILIN3Q9NT22 766 aa25.41■■□□□ 1.66
RETREG3-204ENST00000586796 AGTPBP1Q9UPW5 1226 aa25.41■■□□□ 1.66
RETREG3-204ENST00000586796 ORC4O43929 436 aa25.4■■□□□ 1.66
RETREG3-204ENST00000586796 USP14P54578 494 aa25.4■■□□□ 1.66
RETREG3-204ENST00000586796 NEDD1Q8NHV4 660 aa25.4■■□□□ 1.66
RETREG3-204ENST00000586796 MAP4K1Q92918 833 aa25.4■■□□□ 1.66
RETREG3-204ENST00000586796 KIAA1683Q9H0B3 1180 aa25.4■■□□□ 1.66
RETREG3-204ENST00000586796 ZFYVE28Q9HCC9 887 aa25.4■■□□□ 1.66
RETREG3-204ENST00000586796 RBM8AQ9Y5S9 174 aaKnown RBP25.4■■□□□ 1.66
RETREG3-204ENST00000586796 NEDD4P46934 1319 aa25.39■■□□□ 1.66
RETREG3-204ENST00000586796 FGRP09769 529 aa25.39■■□□□ 1.66
RETREG3-204ENST00000586796 CYP2C8P10632 490 aa25.39■■□□□ 1.66
RETREG3-204ENST00000586796 CEP95Q96GE4 821 aa25.39■■□□□ 1.66
RETREG3-204ENST00000586796 GTF3C3Q9Y5Q9 886 aa25.39■■□□□ 1.66
RETREG3-204ENST00000586796 IGKV6D-41A0A0C4DH26 115 aa25.38■■□□□ 1.65
RETREG3-204ENST00000586796 RAD21O60216 631 aa25.38■■□□□ 1.65
RETREG3-204ENST00000586796 ZCCHC17Q9NP64 241 aaKnown RBP25.38■■□□□ 1.65
RETREG3-204ENST00000586796 CLIP2Q9UDT6 1046 aa25.38■■□□□ 1.65
RETREG3-204ENST00000586796 NMT2O60551 498 aa25.37■■□□□ 1.65
RETREG3-204ENST00000586796 CYP21A2P08686 494 aa25.37■■□□□ 1.65
RETREG3-204ENST00000586796 SH2D4AQ9H788 454 aa25.37■■□□□ 1.65
RETREG3-204ENST00000586796 TMX2Q9Y320 296 aa25.37■■□□□ 1.65
RETREG3-204ENST00000586796 PTPRFP10586 1907 aa25.37■■□□□ 1.65
RETREG3-204ENST00000586796 PCP11498 1178 aaKnown RBP25.36■■□□□ 1.65
RETREG3-204ENST00000586796 PABPC4Q13310 644 aaKnown RBP eCLIP25.36■■□□□ 1.65
RETREG3-204ENST00000586796 SPICE1Q8N0Z3 855 aa25.36■■□□□ 1.65
RETREG3-204ENST00000586796 NKX2-3Q8TAU0 364 aa25.36■■□□□ 1.65
RETREG3-204ENST00000586796 PARK7Q99497 189 aaKnown RBP25.36■■□□□ 1.65
RETREG3-204ENST00000586796 MTMR4Q9NYA4 1195 aa25.36■■□□□ 1.65
RETREG3-204ENST00000586796 NYAP2Q9P242 653 aa25.36■■□□□ 1.65
RETREG3-204ENST00000586796 B4E1Z4 1266 aa25.35■■□□□ 1.65
RETREG3-204ENST00000586796 GPR25O00155 361 aa25.35■■□□□ 1.65
RETREG3-204ENST00000586796 OSBPP22059 807 aa25.35■■□□□ 1.65
RETREG3-204ENST00000586796 ESR2Q92731 530 aa25.35■■□□□ 1.65
RETREG3-204ENST00000586796 C12orf42Q96LP6 360 aa25.35■■□□□ 1.65
RETREG3-204ENST00000586796 CFHR5Q9BXR6 569 aa25.35■■□□□ 1.65
RETREG3-204ENST00000586796 IL17RBQ9NRM6 502 aa25.35■■□□□ 1.65
RETREG3-204ENST00000586796 STX8Q9UNK0 236 aa25.35■■□□□ 1.65
RETREG3-204ENST00000586796 SLC45A1Q9Y2W3 748 aa25.35■■□□□ 1.65
RETREG3-204ENST00000586796 PLIN4Q96Q06 1357 aa25.34■■□□□ 1.65
RETREG3-204ENST00000586796 KDM4AO75164 1064 aa25.34■■□□□ 1.65
RETREG3-204ENST00000586796 TTLL1O95922 423 aa25.34■■□□□ 1.65
RETREG3-204ENST00000586796 VCAM1P19320 739 aa25.34■■□□□ 1.65
RETREG3-204ENST00000586796 KIAA1755Q5JYT7 1200 aa25.34■■□□□ 1.65
RETREG3-204ENST00000586796 VCPKMTQ9H867 229 aa25.34■■□□□ 1.65
RETREG3-204ENST00000586796 CPA4Q9UI42 421 aa25.34■■□□□ 1.65
RETREG3-204ENST00000586796 PNMA3Q9UL41 463 aa25.34■■□□□ 1.65
RETREG3-204ENST00000586796 TAF6LQ9Y6J9 622 aa25.34■■□□□ 1.65
RETREG3-204ENST00000586796 LAMA4Q16363 1823 aa25.34■■□□□ 1.65
RETREG3-204ENST00000586796 LOC285556D6RIA3 1793 aa25.33■■□□□ 1.65
RETREG3-204ENST00000586796 TLR2O60603 784 aa25.33■■□□□ 1.65
RETREG3-204ENST00000586796 IRX3P78415 501 aaPredicted RBP25.33■■□□□ 1.65
RETREG3-204ENST00000586796 LRRC47Q8N1G4 583 aaKnown RBP25.33■■□□□ 1.65
RETREG3-204ENST00000586796 SMCR8Q8TEV9 937 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms