RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 TROAPQ12815 778 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 CFAP100Q494V2 611 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 KMT5BQ4FZB7 885 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 NBPF5PQ86XG9 351 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 PDILTQ8N807 584 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 FANCLQ9NW38 375 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 TRIM75PA6NK02 468 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 CALM1P0DP23 149 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 CALM2P0DP24 149 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 CALM3P0DP25 149 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 HIBADHP31937 336 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 KRT2P35908 639 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 PDE4BQ07343 736 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 ZNF397Q8NF99 534 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 DPF2Q92785 391 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 PHF20Q9BVI0 1012 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 AATFQ9NY61 560 aaKnown RBP eCLIP15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 FAM53CQ9NYF3 392 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 TFCP2L1Q9NZI6 479 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 NARFQ9UHQ1 456 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 BAZ2AQ9UIF9 1905 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 SCN7AQ01118 1682 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 MYH2Q9UKX2 1941 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 FAM205CA6NFA0 338 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 MYO1BO43795 1136 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 CSRNP2Q9H175 543 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 MAN1B1Q9UKM7 699 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 PRR29P0C7W0 189 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 IRX3P78415 501 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 E4F1Q66K89 784 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 SMARCE1Q969G3 411 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 CRNKL1Q9BZJ0 848 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 ANKRD2Q9GZV1 360 aa15.1■□□□□ 0.01
CSNK1D-222ENST00000584377 DDAH1O94760 285 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 NT5DC1Q5TFE4 455 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 USP49Q70CQ1 688 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 PTF1AQ7RTS3 328 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 CCDC24Q8N4L8 307 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 TRERF1Q96PN7 1200 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 NOL10Q9BSC4 688 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 TSPYL1Q9H0U9 437 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 DCP1AQ9NPI6 582 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 PDS5AQ29RF7 1337 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 ZPR1O75312 459 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 PRDX5P30044 214 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 FAM193AP78312 1265 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 EVX2Q03828 476 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 EARS2Q5JPH6 523 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 KANK3Q6NY19 840 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 TMTC3Q6ZXV5 915 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 GRAMD1CQ8IYS0 662 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 ZNF831Q5JPB2 1677 aa15.09■□□□□ 0.01
CSNK1D-222ENST00000584377 KIF2AO00139 706 aaPredicted RBP15.08■□□□□ 0.01
CSNK1D-222ENST00000584377 ACTN4O43707 911 aaKnown RBP15.08■□□□□ 0.01
CSNK1D-222ENST00000584377 ORC4O43929 436 aa15.08■□□□□ 0.01
CSNK1D-222ENST00000584377 KCNJ6P48051 423 aa15.08■□□□□ 0.01
CSNK1D-222ENST00000584377 SARSP49591 514 aaKnown RBP15.08■□□□□ 0.01
CSNK1D-222ENST00000584377 MLKLQ8NB16 471 aa15.08■□□□□ 0.01
CSNK1D-222ENST00000584377 BRMS1Q9HCU9 246 aa15.08■□□□□ 0.01
CSNK1D-222ENST00000584377 ST7Q9NRC1 585 aa15.08■□□□□ 0.01
CSNK1D-222ENST00000584377 MYH6P13533 1939 aa15.08■□□□□ 0
CSNK1D-222ENST00000584377 NMT2O60551 498 aa15.08■□□□□ 0
CSNK1D-222ENST00000584377 RPS6KA4O75676 772 aa15.08■□□□□ 0
CSNK1D-222ENST00000584377 CTCFLQ8NI51 663 aaPredicted RBP15.08■□□□□ 0
CSNK1D-222ENST00000584377 ATP8A2Q9NTI2 1148 aa15.08■□□□□ 0
CSNK1D-222ENST00000584377 DACH1Q9UI36 760 aa15.08■□□□□ 0
CSNK1D-222ENST00000584377 PSDA5PKW4 1024 aaPredicted RBP15.07■□□□□ 0
CSNK1D-222ENST00000584377 GNPATO15228 680 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 PIP4K2BP78356 416 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 MORC3Q14149 939 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 ZNF827Q17R98 1081 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 TPTE2Q6XPS3 522 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 CERS3Q8IU89 383 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 VSTM4Q8IW00 320 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 PPP1R13BQ96KQ4 1090 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 TOP1P11387 765 aaKnown RBP15.07■□□□□ 0
CSNK1D-222ENST00000584377 FAM47AQ5JRC9 791 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 RC3H1Q5TC82 1133 aaKnown RBP15.07■□□□□ 0
CSNK1D-222ENST00000584377 CREBRFQ8IUR6 639 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 TRIML1Q8N9V2 468 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 CASZ1Q86V15 1759 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 HSP90AA4PQ58FG1 418 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 DHX58Q96C10 678 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 CCDC34Q96HJ3 373 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 ARPP21Q9UBL0 812 aaPredicted RBP15.07■□□□□ 0
CSNK1D-222ENST00000584377 JAG2Q9Y219 1238 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 NFE2L3Q9Y4A8 694 aa15.07■□□□□ 0
CSNK1D-222ENST00000584377 TMEM232C9JQI7 657 aa15.06■□□□□ 0
CSNK1D-222ENST00000584377 BMP15O95972 392 aa15.06■□□□□ 0
CSNK1D-222ENST00000584377 CYP2D6P10635 497 aa15.06■□□□□ 0
CSNK1D-222ENST00000584377 HNRNPH2P55795 449 aaKnown RBP15.06■□□□□ 0
CSNK1D-222ENST00000584377 FMR1Q06787 632 aaKnown RBP eCLIP15.06■□□□□ 0
CSNK1D-222ENST00000584377 AEBP2Q6ZN18 517 aaPredicted RBP15.06■□□□□ 0
CSNK1D-222ENST00000584377 SRBD1Q8N5C6 995 aaKnown RBP15.06■□□□□ 0
CSNK1D-222ENST00000584377 EPSTI1Q96J88 318 aa15.06■□□□□ 0
CSNK1D-222ENST00000584377 FEZ2Q9UHY8 353 aaPredicted RBP15.06■□□□□ 0
CSNK1D-222ENST00000584377 CNTNAP5Q8WYK1 1306 aa15.06■□□□□ 0
CSNK1D-222ENST00000584377 TXNRD3Q86VQ6 643 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms