RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SMIM22K7EJ46 135 aa24.48■■□□□ 1.51
SS18-224ENST00000584083 APPP05067 770 aa24.48■■□□□ 1.51
SS18-224ENST00000584083 GNAT2P19087 354 aa24.48■■□□□ 1.51
SS18-224ENST00000584083 HOXA7P31268 230 aaPredicted RBP24.48■■□□□ 1.51
SS18-224ENST00000584083 GUCY1A2P33402 732 aa24.48■■□□□ 1.51
SS18-224ENST00000584083 CDK8P49336 464 aa24.48■■□□□ 1.51
SS18-224ENST00000584083 USP14P54578 494 aa24.48■■□□□ 1.51
SS18-224ENST00000584083 ARMC5Q96C12 935 aa24.48■■□□□ 1.51
SS18-224ENST00000584083 KIAA1683Q9H0B3 1180 aa24.48■■□□□ 1.51
SS18-224ENST00000584083 ARPP21Q9UBL0 812 aaPredicted RBP24.48■■□□□ 1.51
SS18-224ENST00000584083 MYPNQ86TC9 1320 aa24.47■■□□□ 1.51
SS18-224ENST00000584083 IRX6P78412 446 aaPredicted RBP24.47■■□□□ 1.51
SS18-224ENST00000584083 FAM110CQ1W6H9 321 aa24.47■■□□□ 1.51
SS18-224ENST00000584083 GIMAP6Q6P9H5 292 aa24.47■■□□□ 1.51
SS18-224ENST00000584083 TMEM179Q6ZVK1 233 aa24.47■■□□□ 1.51
SS18-224ENST00000584083 RAET1EQ8TD07 263 aa24.47■■□□□ 1.51
SS18-224ENST00000584083 SEC62Q99442 399 aaKnown RBP24.47■■□□□ 1.51
SS18-224ENST00000584083 P2RX7Q99572 595 aaKnown RBP24.47■■□□□ 1.51
SS18-224ENST00000584083 HTTP42858 3142 aa24.47■■□□□ 1.51
SS18-224ENST00000584083 MINDY4BA8MYZ0 360 aa24.46■■□□□ 1.51
SS18-224ENST00000584083 TNPO2O14787 897 aaKnown RBP24.46■■□□□ 1.51
SS18-224ENST00000584083 AKR1B1P15121 316 aa24.46■■□□□ 1.51
SS18-224ENST00000584083 C16orf86Q6ZW13 317 aa24.46■■□□□ 1.51
SS18-224ENST00000584083 EVI5LQ96CN4 794 aa24.46■■□□□ 1.51
SS18-224ENST00000584083 C12orf42Q96LP6 360 aa24.46■■□□□ 1.51
SS18-224ENST00000584083 CCDC17Q96LX7 622 aa24.46■■□□□ 1.51
SS18-224ENST00000584083 DOCK3Q8IZD9 2030 aa24.45■■□□□ 1.51
SS18-224ENST00000584083 TDO2P48775 406 aa24.45■■□□□ 1.5
SS18-224ENST00000584083 HERVK_113P62684 666 aa24.45■■□□□ 1.5
SS18-224ENST00000584083 SBK1Q52WX2 424 aa24.45■■□□□ 1.5
SS18-224ENST00000584083 ZMYM1Q5SVZ6 1142 aa24.45■■□□□ 1.5
SS18-224ENST00000584083 CHD1LQ86WJ1 897 aa24.45■■□□□ 1.5
SS18-224ENST00000584083 SH3TC2Q8TF17 1288 aa24.45■■□□□ 1.5
SS18-224ENST00000584083 PATL2C9JE40 543 aaKnown RBP24.44■■□□□ 1.5
SS18-224ENST00000584083 PRKCZQ05513 592 aa24.44■■□□□ 1.5
SS18-224ENST00000584083 STK11IPQ8N1F8 1099 aa24.44■■□□□ 1.5
SS18-224ENST00000584083 USP17L15C9J2P7 530 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 USP17L13C9JLJ4 530 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 USP17L11C9JVI0 530 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 USP17L18D6R9N7 530 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 USP17L22D6RA61 530 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 USP17L17D6RBQ6 530 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 USP17L19D6RCP7 530 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 USP17L20D6RJB6 530 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 MYCP01106 439 aaPredicted RBP24.43■■□□□ 1.5
SS18-224ENST00000584083 NUCB1Q02818 461 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 USP17L24Q0WX57 530 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 COA7Q96BR5 231 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 ZNF333Q96JL9 665 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 NACAP1Q9BZK3 213 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 GABRQQ9UN88 632 aa24.43■■□□□ 1.5
SS18-224ENST00000584083 A0A1W2PRG0 241 aa24.42■■□□□ 1.5
SS18-224ENST00000584083 VCAM1P19320 739 aa24.42■■□□□ 1.5
SS18-224ENST00000584083 TMEM106CQ9BVX2 250 aa24.42■■□□□ 1.5
SS18-224ENST00000584083 MKNK2Q9HBH9 465 aa24.42■■□□□ 1.5
SS18-224ENST00000584083 ARHGEF10LQ9HCE6 1279 aa24.42■■□□□ 1.5
SS18-224ENST00000584083 EPB41L4AQ9HCS5 686 aaPredicted RBP24.42■■□□□ 1.5
SS18-224ENST00000584083 MORF4L1Q9UBU8 362 aa24.42■■□□□ 1.5
SS18-224ENST00000584083 KIAA0100Q14667 2235 aaKnown RBP24.42■■□□□ 1.5
SS18-224ENST00000584083 TRIM6-TRIM34B2RNG4 842 aa24.41■■□□□ 1.5
SS18-224ENST00000584083 GRK4P32298 578 aa24.41■■□□□ 1.5
SS18-224ENST00000584083 ICA1Q05084 483 aa24.41■■□□□ 1.5
SS18-224ENST00000584083 CLEC10AQ8IUN9 316 aa24.41■■□□□ 1.5
SS18-224ENST00000584083 IFNL3Q8IZI9 196 aa24.41■■□□□ 1.5
SS18-224ENST00000584083 POTEFA5A3E0 1075 aa24.4■■□□□ 1.5
SS18-224ENST00000584083 FLT3LGP49771 235 aa24.4■■□□□ 1.5
SS18-224ENST00000584083 GPRC5AQ8NFJ5 357 aa24.4■■□□□ 1.5
SS18-224ENST00000584083 GTF3C2Q8WUA4 911 aaPredicted RBP24.4■■□□□ 1.5
SS18-224ENST00000584083 PAGR1Q9BTK6 254 aa24.4■■□□□ 1.5
SS18-224ENST00000584083 RPAP3Q9H6T3 665 aaPredicted RBP24.4■■□□□ 1.5
SS18-224ENST00000584083 BIN2Q9UBW5 565 aaPredicted RBP24.4■■□□□ 1.5
SS18-224ENST00000584083 PEX10O60683 326 aa24.39■■□□□ 1.49
SS18-224ENST00000584083 ATP2B2Q01814 1243 aa24.39■■□□□ 1.49
SS18-224ENST00000584083 CATSPERGQ6ZRH7 1159 aa24.39■■□□□ 1.49
SS18-224ENST00000584083 CCDC129Q6ZRS4 1044 aa24.39■■□□□ 1.49
SS18-224ENST00000584083 RILPL2Q969X0 211 aa24.39■■□□□ 1.49
SS18-224ENST00000584083 NAPBQ9H115 298 aa24.39■■□□□ 1.49
SS18-224ENST00000584083 SH2D4AQ9H788 454 aa24.39■■□□□ 1.49
SS18-224ENST00000584083 TXNRD2Q9NNW7 524 aa24.39■■□□□ 1.49
SS18-224ENST00000584083 RBPJLQ9UBG7 517 aa24.39■■□□□ 1.49
SS18-224ENST00000584083 RBBP6Q7Z6E9 1792 aaKnown RBP24.39■■□□□ 1.49
SS18-224ENST00000584083 CENPFP49454 3210 aa24.39■■□□□ 1.49
SS18-224ENST00000584083 SIAH1Q8IUQ4 282 aa24.38■■□□□ 1.49
SS18-224ENST00000584083 PLEKHM2Q8IWE5 1019 aa24.38■■□□□ 1.49
SS18-224ENST00000584083 CCAR1Q8IX12 1150 aaKnown RBP24.38■■□□□ 1.49
SS18-224ENST00000584083 KANSL2Q9H9L4 492 aa24.38■■□□□ 1.49
SS18-224ENST00000584083 ADCY3O60266 1144 aa24.37■■□□□ 1.49
SS18-224ENST00000584083 SLAIN1Q8ND83 568 aa24.37■■□□□ 1.49
SS18-224ENST00000584083 TANGO6Q9C0B7 1094 aa24.37■■□□□ 1.49
SS18-224ENST00000584083 ZNF287Q9HBT7 754 aa24.37■■□□□ 1.49
SS18-224ENST00000584083 TMX2Q9Y320 296 aa24.37■■□□□ 1.49
SS18-224ENST00000584083 ROBO3Q96MS0 1386 aa24.37■■□□□ 1.49
SS18-224ENST00000584083 EEF2P13639 858 aaKnown RBP24.36■■□□□ 1.49
SS18-224ENST00000584083 RASA1P20936 1047 aa24.36■■□□□ 1.49
SS18-224ENST00000584083 ERVK-9P63128 1117 aa24.36■■□□□ 1.49
SS18-224ENST00000584083 ERVK-24P63145 666 aa24.36■■□□□ 1.49
SS18-224ENST00000584083 ZNF444Q8N0Y2 327 aaPredicted RBP24.36■■□□□ 1.49
SS18-224ENST00000584083 HELLSQ9NRZ9 838 aa24.36■■□□□ 1.49
SS18-224ENST00000584083 SLC3A2P08195 630 aaKnown RBP24.35■■□□□ 1.49
SS18-224ENST00000584083 IRF5Q13568 498 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms