RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 APPBP2Q92624 585 aa25.79■■□□□ 1.72
PPP4R1-228ENST00000584074 C12orf42Q96LP6 360 aa25.79■■□□□ 1.72
PPP4R1-228ENST00000584074 CTR9Q6PD62 1173 aa25.78■■□□□ 1.72
PPP4R1-228ENST00000584074 AMOTL1Q8IY63 956 aa25.78■■□□□ 1.72
PPP4R1-228ENST00000584074 MORF4L1Q9UBU8 362 aa25.78■■□□□ 1.72
PPP4R1-228ENST00000584074 ZBTB47Q9UFB7 747 aaPredicted RBP25.78■■□□□ 1.72
PPP4R1-228ENST00000584074 MYH7P12883 1935 aa25.78■■□□□ 1.72
PPP4R1-228ENST00000584074 ZFYP08048 801 aaPredicted RBP25.77■■□□□ 1.72
PPP4R1-228ENST00000584074 USP14P54578 494 aa25.77■■□□□ 1.72
PPP4R1-228ENST00000584074 MTFR1Q15390 333 aa25.77■■□□□ 1.72
PPP4R1-228ENST00000584074 COA7Q96BR5 231 aa25.77■■□□□ 1.72
PPP4R1-228ENST00000584074 GCC1Q96CN9 775 aa25.77■■□□□ 1.72
PPP4R1-228ENST00000584074 TXNRD2Q9NNW7 524 aa25.77■■□□□ 1.72
PPP4R1-228ENST00000584074 TAOK2Q9UL54 1235 aa25.77■■□□□ 1.72
PPP4R1-228ENST00000584074 SALL3Q9BXA9 1300 aa25.77■■□□□ 1.72
PPP4R1-228ENST00000584074 MGAMO43451 1857 aa25.77■■□□□ 1.72
PPP4R1-228ENST00000584074 CDK8P49336 464 aa25.76■■□□□ 1.71
PPP4R1-228ENST00000584074 RBPJLQ9UBG7 517 aa25.76■■□□□ 1.71
PPP4R1-228ENST00000584074 BIN2Q9UBW5 565 aaPredicted RBP25.76■■□□□ 1.71
PPP4R1-228ENST00000584074 A0A1W2PRG0 241 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 GSG1L2A8MUP6 293 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 USP17L15C9J2P7 530 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 USP17L13C9JLJ4 530 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 USP17L11C9JVI0 530 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 USP17L18D6R9N7 530 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 USP17L22D6RA61 530 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 USP17L17D6RBQ6 530 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 USP17L19D6RCP7 530 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 USP17L20D6RJB6 530 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 M0R2C6 588 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 ADCY3O60266 1144 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 AKR1B1P15121 316 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 VCAM1P19320 739 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 USP17L24Q0WX57 530 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 AAMPQ13685 434 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 POTEEQ6S8J3 1075 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 TMEM179Q6ZVK1 233 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 C16orf86Q6ZW13 317 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 SLAIN1Q8ND83 568 aa25.75■■□□□ 1.71
PPP4R1-228ENST00000584074 GPAA1O43292 621 aa25.74■■□□□ 1.71
PPP4R1-228ENST00000584074 ELNP15502 786 aa25.74■■□□□ 1.71
PPP4R1-228ENST00000584074 CLEC10AQ8IUN9 316 aa25.74■■□□□ 1.71
PPP4R1-228ENST00000584074 GPRC5AQ8NFJ5 357 aa25.74■■□□□ 1.71
PPP4R1-228ENST00000584074 EXOC6Q8TAG9 804 aa25.74■■□□□ 1.71
PPP4R1-228ENST00000584074 BAZ2AQ9UIF9 1905 aaKnown RBP25.74■■□□□ 1.71
PPP4R1-228ENST00000584074 RBBP6Q7Z6E9 1792 aaKnown RBP25.74■■□□□ 1.71
PPP4R1-228ENST00000584074 IRF5Q13568 498 aa25.73■■□□□ 1.71
PPP4R1-228ENST00000584074 LRRFIP1Q32MZ4 808 aaKnown RBP25.73■■□□□ 1.71
PPP4R1-228ENST00000584074 CATSPERGQ6ZRH7 1159 aa25.73■■□□□ 1.71
PPP4R1-228ENST00000584074 SEC62Q99442 399 aaKnown RBP25.73■■□□□ 1.71
PPP4R1-228ENST00000584074 PAGR1Q9BTK6 254 aa25.73■■□□□ 1.71
PPP4R1-228ENST00000584074 FSD1Q9BTV5 496 aa25.73■■□□□ 1.71
PPP4R1-228ENST00000584074 ARPP21Q9UBL0 812 aaPredicted RBP25.73■■□□□ 1.71
PPP4R1-228ENST00000584074 GIMAP6Q6P9H5 292 aa25.72■■□□□ 1.71
PPP4R1-228ENST00000584074 SIAH1Q8IUQ4 282 aa25.72■■□□□ 1.71
PPP4R1-228ENST00000584074 CCDC17Q96LX7 622 aa25.72■■□□□ 1.71
PPP4R1-228ENST00000584074 RPAP3Q9H6T3 665 aaPredicted RBP25.72■■□□□ 1.71
PPP4R1-228ENST00000584074 GJD2Q9UKL4 321 aa25.72■■□□□ 1.71
PPP4R1-228ENST00000584074 CCL5P13501 91 aa25.71■■□□□ 1.71
PPP4R1-228ENST00000584074 ERVK-9P63128 1117 aa25.71■■□□□ 1.71
PPP4R1-228ENST00000584074 ERVK-24P63145 666 aa25.71■■□□□ 1.71
PPP4R1-228ENST00000584074 Q3C1V9 767 aa25.71■■□□□ 1.71
PPP4R1-228ENST00000584074 SBK1Q52WX2 424 aa25.71■■□□□ 1.71
PPP4R1-228ENST00000584074 PXYLP1Q8TE99 480 aa25.71■■□□□ 1.71
PPP4R1-228ENST00000584074 EPB41L4AQ9HCS5 686 aaPredicted RBP25.71■■□□□ 1.71
PPP4R1-228ENST00000584074 STAP2Q9UGK3 403 aa25.71■■□□□ 1.71
PPP4R1-228ENST00000584074 UBXN2AP68543 259 aa25.7■■□□□ 1.7
PPP4R1-228ENST00000584074 GTF3C2Q8WUA4 911 aaPredicted RBP25.7■■□□□ 1.7
PPP4R1-228ENST00000584074 MINDY4BA8MYZ0 360 aa25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 APPP05067 770 aa25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 INHAP05111 366 aa25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 GNAT2P19087 354 aa25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 PDE1AP54750 535 aa25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 ICA1Q05084 483 aa25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 KIAA1755Q5JYT7 1200 aa25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 ZMYM1Q5SVZ6 1142 aa25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 STK11IPQ8N1F8 1099 aa25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 RNF208Q9H0X6 261 aa25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 PORCNQ9H237 461 aa25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 RWDD1Q9H446 243 aaPredicted RBP25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 KIAA0100Q14667 2235 aaKnown RBP25.69■■□□□ 1.7
PPP4R1-228ENST00000584074 CNMDO75829 334 aa25.68■■□□□ 1.7
PPP4R1-228ENST00000584074 IGHDP01880 384 aa25.68■■□□□ 1.7
PPP4R1-228ENST00000584074 TDO2P48775 406 aa25.68■■□□□ 1.7
PPP4R1-228ENST00000584074 B4GALNT3Q6L9W6 998 aa25.68■■□□□ 1.7
PPP4R1-228ENST00000584074 SMC5Q8IY18 1101 aa25.68■■□□□ 1.7
PPP4R1-228ENST00000584074 LNPKQ9C0E8 428 aa25.68■■□□□ 1.7
PPP4R1-228ENST00000584074 UNC93B1Q9H1C4 597 aa25.68■■□□□ 1.7
PPP4R1-228ENST00000584074 ARHGEF10LQ9HCE6 1279 aa25.68■■□□□ 1.7
PPP4R1-228ENST00000584074 RABGAP1Q9Y3P9 1069 aa25.68■■□□□ 1.7
PPP4R1-228ENST00000584074 SUPT16HQ9Y5B9 1047 aaKnown RBP25.68■■□□□ 1.7
PPP4R1-228ENST00000584074 PATL2C9JE40 543 aaKnown RBP25.67■■□□□ 1.7
PPP4R1-228ENST00000584074 TMX2Q9Y320 296 aa25.67■■□□□ 1.7
PPP4R1-228ENST00000584074 GJB1P08034 283 aa25.66■■□□□ 1.7
PPP4R1-228ENST00000584074 EEF2P13639 858 aaKnown RBP25.66■■□□□ 1.7
PPP4R1-228ENST00000584074 MAPK4P31152 587 aa25.66■■□□□ 1.7
PPP4R1-228ENST00000584074 CCAR1Q8IX12 1150 aaKnown RBP25.66■■□□□ 1.7
PPP4R1-228ENST00000584074 IFNL3Q8IZI9 196 aa25.66■■□□□ 1.7
PPP4R1-228ENST00000584074 SHISA4Q96DD7 197 aa25.66■■□□□ 1.7
PPP4R1-228ENST00000584074 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms