RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 C12orf42Q96LP6 360 aa18.39■□□□□ 0.53
SREBF1-222ENST00000583732 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.53
SREBF1-222ENST00000583732 RIOK1Q9BRS2 568 aaKnown RBP18.39■□□□□ 0.53
SREBF1-222ENST00000583732 STAP2Q9UGK3 403 aa18.39■□□□□ 0.53
SREBF1-222ENST00000583732 ZMYND8Q9ULU4 1186 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-222ENST00000583732 ZBED9Q6R2W3 1325 aa18.39■□□□□ 0.53
SREBF1-222ENST00000583732 USP17L15C9J2P7 530 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 USP17L13C9JLJ4 530 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 USP17L11C9JVI0 530 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 USP17L18D6R9N7 530 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 USP17L22D6RA61 530 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 USP17L17D6RBQ6 530 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 USP17L19D6RCP7 530 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 USP17L20D6RJB6 530 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 GOLIM4O00461 696 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 PDE6AP16499 860 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 SHMT1P34896 483 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 RGS2P41220 211 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 USP17L24Q0WX57 530 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 HSP90AB4PQ58FF6 505 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
SREBF1-222ENST00000583732 NBPF3Q9H094 633 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 C11orf49Q9H6J7 331 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 CABP5Q9NP86 173 aa18.38■□□□□ 0.53
SREBF1-222ENST00000583732 MPHOSPH10O00566 681 aaKnown RBP18.37■□□□□ 0.53
SREBF1-222ENST00000583732 CNMDO75829 334 aa18.37■□□□□ 0.53
SREBF1-222ENST00000583732 VCAM1P19320 739 aa18.37■□□□□ 0.53
SREBF1-222ENST00000583732 MNX1P50219 401 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-222ENST00000583732 USP14P54578 494 aa18.37■□□□□ 0.53
SREBF1-222ENST00000583732 CACNB2Q08289 660 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-222ENST00000583732 TTF1Q15361 905 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-222ENST00000583732 SLC9C2Q5TAH2 1124 aa18.37■□□□□ 0.53
SREBF1-222ENST00000583732 MAP3K21Q5TCX8 1036 aa18.37■□□□□ 0.53
SREBF1-222ENST00000583732 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
SREBF1-222ENST00000583732 ZNF532Q9HCE3 1301 aa18.37■□□□□ 0.53
SREBF1-222ENST00000583732 IFIT2P09913 472 aaKnown RBP18.36■□□□□ 0.53
SREBF1-222ENST00000583732 XRCC5P13010 732 aaKnown RBP18.36■□□□□ 0.53
SREBF1-222ENST00000583732 SYN1P17600 705 aa18.36■□□□□ 0.53
SREBF1-222ENST00000583732 CCND3P30281 292 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-222ENST00000583732 SEPT2Q15019 361 aa18.36■□□□□ 0.53
SREBF1-222ENST00000583732 MORN1Q5T089 497 aa18.36■□□□□ 0.53
SREBF1-222ENST00000583732 CATSPERGQ6ZRH7 1159 aa18.36■□□□□ 0.53
SREBF1-222ENST00000583732 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
SREBF1-222ENST00000583732 USP6NLQ92738 828 aa18.36■□□□□ 0.53
SREBF1-222ENST00000583732 EDC3Q96F86 508 aaKnown RBP18.36■□□□□ 0.53
SREBF1-222ENST00000583732 APBA2Q99767 749 aa18.36■□□□□ 0.53
SREBF1-222ENST00000583732 CRNKL1Q9BZJ0 848 aaKnown RBP18.36■□□□□ 0.53
SREBF1-222ENST00000583732 RPAP3Q9H6T3 665 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-222ENST00000583732 MCM9Q9NXL9 1143 aa18.36■□□□□ 0.53
SREBF1-222ENST00000583732 OGDHLQ9ULD0 1010 aa18.36■□□□□ 0.53
SREBF1-222ENST00000583732 COG6Q9Y2V7 657 aa18.36■□□□□ 0.53
SREBF1-222ENST00000583732 BAZ2AQ9UIF9 1905 aaKnown RBP18.35■□□□□ 0.53
SREBF1-222ENST00000583732 CYP2D6P10635 497 aa18.35■□□□□ 0.53
SREBF1-222ENST00000583732 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
SREBF1-222ENST00000583732 TRMT44Q8IYL2 757 aaKnown RBP18.35■□□□□ 0.53
SREBF1-222ENST00000583732 LCORLQ8N3X6 602 aa18.35■□□□□ 0.53
SREBF1-222ENST00000583732 KIF1BPQ96EK5 621 aa18.35■□□□□ 0.53
SREBF1-222ENST00000583732 KIAA1683Q9H0B3 1180 aa18.35■□□□□ 0.53
SREBF1-222ENST00000583732 RABGAP1Q9Y3P9 1069 aa18.35■□□□□ 0.53
SREBF1-222ENST00000583732 SZT2Q5T011 3432 aa18.35■□□□□ 0.53
SREBF1-222ENST00000583732 MYH7P12883 1935 aa18.34■□□□□ 0.53
SREBF1-222ENST00000583732 SOX1O00570 391 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-222ENST00000583732 CCNA1P78396 465 aa18.34■□□□□ 0.53
SREBF1-222ENST00000583732 MAP2K5Q13163 448 aa18.34■□□□□ 0.53
SREBF1-222ENST00000583732 SLFNL1Q499Z3 407 aa18.34■□□□□ 0.53
SREBF1-222ENST00000583732 TMED8Q6PL24 325 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-222ENST00000583732 ARMT1Q9H993 441 aa18.34■□□□□ 0.53
SREBF1-222ENST00000583732 BTBD7Q9P203 1132 aa18.34■□□□□ 0.53
SREBF1-222ENST00000583732 PFASO15067 1338 aa18.33■□□□□ 0.53
SREBF1-222ENST00000583732 SPDYE16A6NNV3 312 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-222ENST00000583732 HMMRO75330 724 aa18.33■□□□□ 0.52
SREBF1-222ENST00000583732 MS4A1P11836 297 aa18.33■□□□□ 0.52
SREBF1-222ENST00000583732 GABPAQ06546 454 aa18.33■□□□□ 0.52
SREBF1-222ENST00000583732 SLC44A5Q8NCS7 719 aa18.33■□□□□ 0.52
SREBF1-222ENST00000583732 LRCH3Q96II8 777 aa18.33■□□□□ 0.52
SREBF1-222ENST00000583732 RANBP2P49792 3224 aaKnown RBP18.32■□□□□ 0.52
SREBF1-222ENST00000583732 A0A0G2JMZ2 1700 aa18.32■□□□□ 0.52
SREBF1-222ENST00000583732 A0A1W2PPC1 479 aa18.32■□□□□ 0.52
SREBF1-222ENST00000583732 TCRBV5S4A2TA0A5A2 114 aa18.32■□□□□ 0.52
SREBF1-222ENST00000583732 GLRX3O76003 335 aaKnown RBP18.32■□□□□ 0.52
SREBF1-222ENST00000583732 SIRT2Q8IXJ6 389 aa18.32■□□□□ 0.52
SREBF1-222ENST00000583732 RPAP2Q8IXW5 612 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-222ENST00000583732 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.32■□□□□ 0.52
SREBF1-222ENST00000583732 BOLA2Q9H3K6 86 aa18.32■□□□□ 0.52
SREBF1-222ENST00000583732 DCP1AQ9NPI6 582 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-222ENST00000583732 FLRT1Q9NZU1 646 aa18.32■□□□□ 0.52
SREBF1-222ENST00000583732 DDX19BQ9UMR2 479 aa18.32■□□□□ 0.52
SREBF1-222ENST00000583732 IVNS1ABPQ9Y6Y0 642 aa18.32■□□□□ 0.52
SREBF1-222ENST00000583732 A0A1W2PRG0 241 aa18.31■□□□□ 0.52
SREBF1-222ENST00000583732 PRKAB2O43741 272 aa18.31■□□□□ 0.52
SREBF1-222ENST00000583732 MBD4O95243 580 aa18.31■□□□□ 0.52
SREBF1-222ENST00000583732 PTPREP23469 700 aa18.31■□□□□ 0.52
SREBF1-222ENST00000583732 LHX8Q68G74 356 aa18.31■□□□□ 0.52
SREBF1-222ENST00000583732 CLEC10AQ8IUN9 316 aa18.31■□□□□ 0.52
SREBF1-222ENST00000583732 DYNLL2Q96FJ2 89 aa18.31■□□□□ 0.52
SREBF1-222ENST00000583732 TANGO6Q9C0B7 1094 aa18.31■□□□□ 0.52
SREBF1-222ENST00000583732 PAG1Q9NWQ8 432 aa18.31■□□□□ 0.52
SREBF1-222ENST00000583732 RLFQ13129 1914 aa18.3■□□□□ 0.52
SREBF1-222ENST00000583732 SLC15A5A6NIM6 579 aa18.3■□□□□ 0.52
SREBF1-222ENST00000583732 MFSD14CQ5VZR4 134 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms