RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 KRT40Q6A162 431 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 ATL3Q6DD88 541 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 CDC42EP5Q6NZY7 148 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 KIAA0825Q8IV33 1275 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 TAOK2Q9UL54 1235 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 FOCADQ5VW36 1801 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 MYH15Q9Y2K3 1946 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 RAD17O75943 681 aa16.97■□□□□ 0.31
MKS1-211ENST00000581761 RASA1P20936 1047 aa16.97■□□□□ 0.31
MKS1-211ENST00000581761 KIF23Q02241 960 aaPredicted RBP16.97■□□□□ 0.31
MKS1-211ENST00000581761 BRAPQ7Z569 592 aa16.97■□□□□ 0.31
MKS1-211ENST00000581761 NBPF11Q86T75 865 aa16.97■□□□□ 0.31
MKS1-211ENST00000581761 CRACR2BQ8N4Y2 399 aaPredicted RBP16.97■□□□□ 0.31
MKS1-211ENST00000581761 KAT14Q9H8E8 782 aa16.97■□□□□ 0.31
MKS1-211ENST00000581761 GJB4Q9NTQ9 266 aa16.97■□□□□ 0.31
MKS1-211ENST00000581761 TCP11L1Q9NUJ3 509 aa16.97■□□□□ 0.31
MKS1-211ENST00000581761 ADAMTSL1Q8N6G6 1762 aa16.97■□□□□ 0.31
MKS1-211ENST00000581761 SCN9AQ15858 1988 aa16.97■□□□□ 0.31
MKS1-211ENST00000581761 GOLGA6L4A6NEF3 574 aa16.96■□□□□ 0.31
MKS1-211ENST00000581761 WDHD1O75717 1129 aaPredicted RBP16.96■□□□□ 0.31
MKS1-211ENST00000581761 DEXIO95424 95 aa16.96■□□□□ 0.31
MKS1-211ENST00000581761 RBM5P52756 815 aaKnown RBP eCLIP16.96■□□□□ 0.31
MKS1-211ENST00000581761 EIF6P56537 245 aaKnown RBP16.96■□□□□ 0.31
MKS1-211ENST00000581761 HDLBPQ00341 1268 aaKnown RBP16.96■□□□□ 0.31
MKS1-211ENST00000581761 AKAP17AQ02040 695 aaKnown RBP16.96■□□□□ 0.31
MKS1-211ENST00000581761 TROAPQ12815 778 aa16.96■□□□□ 0.31
MKS1-211ENST00000581761 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.31
MKS1-211ENST00000581761 DGKHQ86XP1 1220 aa16.96■□□□□ 0.31
MKS1-211ENST00000581761 GPC2Q8N158 579 aa16.96■□□□□ 0.31
MKS1-211ENST00000581761 CMTR1Q8N1G2 835 aaKnown RBP16.96■□□□□ 0.31
MKS1-211ENST00000581761 CCDC82Q8N4S0 544 aa16.96■□□□□ 0.31
MKS1-211ENST00000581761 CTCFLQ8NI51 663 aaPredicted RBP16.96■□□□□ 0.31
MKS1-211ENST00000581761 ANKS1AQ92625 1134 aa16.96■□□□□ 0.31
MKS1-211ENST00000581761 L3MBTL3Q96JM7 780 aaPredicted RBP16.96■□□□□ 0.31
MKS1-211ENST00000581761 MRIQ9BWK5 157 aa16.96■□□□□ 0.31
MKS1-211ENST00000581761 DDX4Q9NQI0 724 aaKnown RBP16.96■□□□□ 0.31
MKS1-211ENST00000581761 KIF28PB7ZC32 967 aa16.95■□□□□ 0.3
MKS1-211ENST00000581761 PLEKHA8P1O95397 391 aa16.95■□□□□ 0.3
MKS1-211ENST00000581761 GUCY1A2P33402 732 aa16.95■□□□□ 0.3
MKS1-211ENST00000581761 CEBPZQ03701 1054 aaKnown RBP16.95■□□□□ 0.3
MKS1-211ENST00000581761 GNL2Q13823 731 aaKnown RBP16.95■□□□□ 0.3
MKS1-211ENST00000581761 CCDC183Q5T5S1 534 aa16.95■□□□□ 0.3
MKS1-211ENST00000581761 RCSD1Q6JBY9 416 aa16.95■□□□□ 0.3
MKS1-211ENST00000581761 TMTC3Q6ZXV5 915 aa16.95■□□□□ 0.3
MKS1-211ENST00000581761 GAS2L3Q86XJ1 694 aa16.95■□□□□ 0.3
MKS1-211ENST00000581761 ZDHHC15Q96MV8 337 aa16.95■□□□□ 0.3
MKS1-211ENST00000581761 USP28Q96RU2 1077 aa16.95■□□□□ 0.3
MKS1-211ENST00000581761 RNF26Q9BY78 433 aaPredicted RBP16.95■□□□□ 0.3
MKS1-211ENST00000581761 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
MKS1-211ENST00000581761 GJA3Q9Y6H8 435 aa16.95■□□□□ 0.3
MKS1-211ENST00000581761 ZNF646O15015 1829 aaPredicted RBP16.95■□□□□ 0.3
MKS1-211ENST00000581761 WDR90Q96KV7 1748 aa16.94■□□□□ 0.3
MKS1-211ENST00000581761 SYCE3A1L190 88 aa16.94■□□□□ 0.3
MKS1-211ENST00000581761 UBE2Q2LH0YL09 131 aa16.94■□□□□ 0.3
MKS1-211ENST00000581761 FSTL1Q12841 308 aa16.94■□□□□ 0.3
MKS1-211ENST00000581761 NEDD1Q8NHV4 660 aa16.94■□□□□ 0.3
MKS1-211ENST00000581761 OSBPL5Q9H0X9 879 aaPredicted RBP16.94■□□□□ 0.3
MKS1-211ENST00000581761 RCOR1Q9UKL0 485 aa16.94■□□□□ 0.3
MKS1-211ENST00000581761 PSMD14O00487 310 aa16.93■□□□□ 0.3
MKS1-211ENST00000581761 PRPF3O43395 683 aaKnown RBP16.93■□□□□ 0.3
MKS1-211ENST00000581761 HLA-DOAP06340 250 aa16.93■□□□□ 0.3
MKS1-211ENST00000581761 KIF5BP33176 963 aa16.93■□□□□ 0.3
MKS1-211ENST00000581761 MRE11P49959 708 aa16.93■□□□□ 0.3
MKS1-211ENST00000581761 APLP1P51693 650 aa16.93■□□□□ 0.3
MKS1-211ENST00000581761 SAFBQ15424 915 aaKnown RBP eCLIP16.93■□□□□ 0.3
MKS1-211ENST00000581761 MYSM1Q5VVJ2 828 aa16.93■□□□□ 0.3
MKS1-211ENST00000581761 CIAPIN1Q6FI81 312 aa16.93■□□□□ 0.3
MKS1-211ENST00000581761 PNMA1Q8ND90 353 aa16.93■□□□□ 0.3
MKS1-211ENST00000581761 SMC1BQ8NDV3 1235 aa16.93■□□□□ 0.3
MKS1-211ENST00000581761 FTOQ9C0B1 505 aaKnown RBP eCLIP16.93■□□□□ 0.3
MKS1-211ENST00000581761 SERPINA10Q9UK55 444 aa16.93■□□□□ 0.3
MKS1-211ENST00000581761 FUT2Q10981 343 aa16.92■□□□□ 0.3
MKS1-211ENST00000581761 LRSAM1Q6UWE0 723 aa16.92■□□□□ 0.3
MKS1-211ENST00000581761 BICD2Q8TD16 824 aa16.92■□□□□ 0.3
MKS1-211ENST00000581761 PGBD1Q96JS3 809 aa16.92■□□□□ 0.3
MKS1-211ENST00000581761 GRPEL1Q9HAV7 217 aa16.92■□□□□ 0.3
MKS1-211ENST00000581761 RTEL1Q9NZ71 1219 aa16.92■□□□□ 0.3
MKS1-211ENST00000581761 SWAP70Q9UH65 585 aa16.92■□□□□ 0.3
MKS1-211ENST00000581761 ZBTB12Q9Y330 459 aaPredicted RBP16.92■□□□□ 0.3
MKS1-211ENST00000581761 PCDHAC2Q9Y5I4 1007 aa16.92■□□□□ 0.3
MKS1-211ENST00000581761 CNTNAP5Q8WYK1 1306 aa16.92■□□□□ 0.3
MKS1-211ENST00000581761 SHTN1A0MZ66 631 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 LETM1O95202 739 aaPredicted RBP16.91■□□□□ 0.3
MKS1-211ENST00000581761 XBP1P17861 261 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 EPS15P42566 896 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 GMPSP49915 693 aaPredicted RBP16.91■□□□□ 0.3
MKS1-211ENST00000581761 GABPAQ06546 454 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 NFIAQ12857 509 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 GRM4Q14833 912 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 STK38Q15208 465 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
MKS1-211ENST00000581761 MAP3K14Q99558 947 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 TMEM47Q9BQJ4 181 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.91■□□□□ 0.3
MKS1-211ENST00000581761 STX8Q9UNK0 236 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 KCNJ14Q9UNX9 436 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 MYO3BQ8WXR4 1341 aa16.91■□□□□ 0.3
MKS1-211ENST00000581761 MMP1P03956 469 aa16.9■□□□□ 0.3
MKS1-211ENST00000581761 VIL1P09327 827 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms