RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RSRP1Q9BUV0 290 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 ACBD3Q9H3P7 528 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 CCSER2Q9H7U1 834 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 FBRSQ9HAH7 460 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 FAM53CQ9NYF3 392 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 PGRP06401 933 aa7.49□□□□□ -1.21
SMCHD1-205ENST00000581383 ZC3H6P61129 1189 aaKnown RBP7.49□□□□□ -1.21
SMCHD1-205ENST00000581383 PDE4BQ07343 736 aa7.49□□□□□ -1.21
SMCHD1-205ENST00000581383 MLANAQ16655 118 aa7.49□□□□□ -1.21
SMCHD1-205ENST00000581383 PRAMEF13Q5VWM6 474 aa7.49□□□□□ -1.21
SMCHD1-205ENST00000581383 ATP13A1Q9HD20 1204 aa7.49□□□□□ -1.21
SMCHD1-205ENST00000581383 TLR6Q9Y2C9 796 aa7.49□□□□□ -1.21
SMCHD1-205ENST00000581383 PITPNM2Q9BZ72 1349 aa7.49□□□□□ -1.21
SMCHD1-205ENST00000581383 RLBP1P12271 317 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 LIG3P49916 1009 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 CHMP4BP1P59074 171 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 RPS26P62854 115 aaKnown RBP7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 PWP1Q13610 501 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 SLBPQ14493 270 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 NKG7Q16617 165 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 NAALADL2Q58DX5 795 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 CARMIL2Q6F5E8 1435 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 FAM214BQ7L5A3 538 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 CCDC120Q96HB5 630 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 TMEM74Q96NL1 305 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 LMCD1Q9NZU5 365 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 ZSWIM5Q9P217 1185 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 PCDHB5Q9Y5E4 795 aa7.48□□□□□ -1.21
SMCHD1-205ENST00000581383 PRR33A8MZF0 331 aa7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 BPNT1O95861 308 aa7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 TNNI2P48788 182 aa7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 CDK8P49336 464 aa7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 CDH24Q86UP0 819 aa7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 PHC3Q8NDX5 983 aa7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 FLAD1Q8NFF5 587 aa7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 UBE2FQ969M7 185 aa7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 GAL3ST3Q96A11 431 aa7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 C8orf37Q96NL8 207 aa7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 DPH2Q9BQC3 489 aaPredicted RBP7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 CAPN10Q9HC96 672 aa7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.47□□□□□ -1.21
SMCHD1-205ENST00000581383 CST3P01034 146 aaPredicted RBP7.46□□□□□ -1.22
SMCHD1-205ENST00000581383 RAC2P15153 192 aa7.46□□□□□ -1.22
SMCHD1-205ENST00000581383 TMEM67Q5HYA8 995 aa7.46□□□□□ -1.22
SMCHD1-205ENST00000581383 SYTL4Q96C24 671 aaPredicted RBP7.46□□□□□ -1.22
SMCHD1-205ENST00000581383 KIRREL1Q96J84 757 aa7.46□□□□□ -1.22
SMCHD1-205ENST00000581383 INPP5FQ9Y2H2 1132 aa7.46□□□□□ -1.22
SMCHD1-205ENST00000581383 EIF4A3P38919 411 aaKnown RBP7.45□□□□□ -1.22
SMCHD1-205ENST00000581383 ETV3P41162 512 aa7.45□□□□□ -1.22
SMCHD1-205ENST00000581383 FAM160A1Q05DH4 1040 aa7.45□□□□□ -1.22
SMCHD1-205ENST00000581383 RIN3Q8TB24 985 aa7.45□□□□□ -1.22
SMCHD1-205ENST00000581383 COX4I2Q96KJ9 171 aa7.45□□□□□ -1.22
SMCHD1-205ENST00000581383 FAM84AQ96KN4 292 aa7.45□□□□□ -1.22
SMCHD1-205ENST00000581383 ADAMTS1Q9UHI8 967 aa7.45□□□□□ -1.22
SMCHD1-205ENST00000581383 CTNND2Q9UQB3 1225 aa7.45□□□□□ -1.22
SMCHD1-205ENST00000581383 PF4P02776 101 aa7.44□□□□□ -1.22
SMCHD1-205ENST00000581383 TFE3P19532 575 aaPredicted RBP7.44□□□□□ -1.22
SMCHD1-205ENST00000581383 KIR3DL1P43629 444 aa7.44□□□□□ -1.22
SMCHD1-205ENST00000581383 AGMOQ6ZNB7 445 aa7.44□□□□□ -1.22
SMCHD1-205ENST00000581383 SPON2Q9BUD6 331 aa7.44□□□□□ -1.22
SMCHD1-205ENST00000581383 SLAMF8Q9P0V8 285 aa7.44□□□□□ -1.22
SMCHD1-205ENST00000581383 DBX1A6NMT0 343 aa7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 ZNF865P0CJ78 1059 aaPredicted RBP7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 CAP2P40123 477 aa7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 PAK2Q13177 524 aa7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 CAMK2GQ13555 558 aaPredicted RBP7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 SLC6A19Q695T7 634 aa7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 FBXL19Q6PCT2 694 aa7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 ZNF296Q8WUU4 475 aaPredicted RBP7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 LIN37Q96GY3 246 aaPredicted RBP7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 TMEM87BQ96K49 555 aa7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 RHOVQ96L33 236 aa7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 TINF2Q9BSI4 451 aa7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 CAPN6Q9Y6Q1 641 aa7.43□□□□□ -1.22
SMCHD1-205ENST00000581383 GLI1P08151 1106 aa7.42□□□□□ -1.22
SMCHD1-205ENST00000581383 PLCG1P19174 1290 aa7.42□□□□□ -1.22
SMCHD1-205ENST00000581383 GNL2Q13823 731 aaKnown RBP7.42□□□□□ -1.22
SMCHD1-205ENST00000581383 THAP5Q7Z6K1 395 aa7.42□□□□□ -1.22
SMCHD1-205ENST00000581383 KIAA0825Q8IV33 1275 aa7.42□□□□□ -1.22
SMCHD1-205ENST00000581383 GOLM1Q8NBJ4 401 aa7.42□□□□□ -1.22
SMCHD1-205ENST00000581383 ALPK1Q96QP1 1244 aa7.42□□□□□ -1.22
SMCHD1-205ENST00000581383 SEMA3GQ9NS98 782 aa7.42□□□□□ -1.22
SMCHD1-205ENST00000581383 USP35Q9P2H5 1018 aa7.42□□□□□ -1.22
SMCHD1-205ENST00000581383 TACC3Q9Y6A5 838 aa7.42□□□□□ -1.22
SMCHD1-205ENST00000581383 RAP1GAPP47736 663 aa7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 RPL6Q02878 288 aaKnown RBP7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 LMNB2Q03252 620 aa7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 SNAP47Q5SQN1 464 aa7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 KRTAP5-3Q6L8H2 238 aa7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 C22orf34Q6ZV56 151 aa7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 TTC6Q86TZ1 520 aa7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 CREG2Q8IUH2 290 aa7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 FAM13CQ8NE31 585 aa7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 TRIT1Q9H3H1 467 aaKnown RBP7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 TJP2Q9UDY2 1190 aa7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 KCNH3Q9ULD8 1083 aa7.41□□□□□ -1.22
SMCHD1-205ENST00000581383 GDNFP39905 211 aa7.4□□□□□ -1.22
SMCHD1-205ENST00000581383 YARSP54577 528 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-205ENST00000581383 TNK2Q07912 1038 aa7.4□□□□□ -1.22
SMCHD1-205ENST00000581383 FYB2Q5VWT5 728 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms