RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 EMILIN3Q9NT22 766 aa15.85■□□□□ 0.13
NUP85-215ENST00000580879 SLC45A1Q9Y2W3 748 aa15.85■□□□□ 0.13
NUP85-215ENST00000580879 C19orf81C9J6K1 198 aa15.84■□□□□ 0.13
NUP85-215ENST00000580879 TTC22Q5TAA0 569 aa15.84■□□□□ 0.13
NUP85-215ENST00000580879 TMEM179Q6ZVK1 233 aa15.84■□□□□ 0.13
NUP85-215ENST00000580879 SKAP1Q86WV1 359 aa15.84■□□□□ 0.13
NUP85-215ENST00000580879 ASCC2Q9H1I8 757 aaPredicted RBP15.84■□□□□ 0.13
NUP85-215ENST00000580879 LOC285556D6RIA3 1793 aa15.84■□□□□ 0.13
NUP85-215ENST00000580879 A0A1W2PRG0 241 aa15.83■□□□□ 0.12
NUP85-215ENST00000580879 PRDM1O75626 825 aa15.83■□□□□ 0.12
NUP85-215ENST00000580879 RASA1P20936 1047 aa15.83■□□□□ 0.12
NUP85-215ENST00000580879 USP17L2Q6R6M4 530 aa15.83■□□□□ 0.12
NUP85-215ENST00000580879 CWC27Q6UX04 472 aaKnown RBP15.83■□□□□ 0.12
NUP85-215ENST00000580879 CCDC17Q96LX7 622 aa15.83■□□□□ 0.12
NUP85-215ENST00000580879 EFCC1Q9HA90 598 aa15.83■□□□□ 0.12
NUP85-215ENST00000580879 MKNK2Q9HBH9 465 aa15.83■□□□□ 0.12
NUP85-215ENST00000580879 DIAPH3Q9NSV4 1193 aa15.83■□□□□ 0.12
NUP85-215ENST00000580879 PNMA3Q9UL41 463 aa15.83■□□□□ 0.12
NUP85-215ENST00000580879 TAOK2Q9UL54 1235 aa15.83■□□□□ 0.12
NUP85-215ENST00000580879 ROBO3Q96MS0 1386 aa15.83■□□□□ 0.12
NUP85-215ENST00000580879 BCRP11274 1271 aa15.82■□□□□ 0.12
NUP85-215ENST00000580879 OSBPP22059 807 aa15.82■□□□□ 0.12
NUP85-215ENST00000580879 CTGFP29279 349 aa15.82■□□□□ 0.12
NUP85-215ENST00000580879 IRX3P78415 501 aaPredicted RBP15.82■□□□□ 0.12
NUP85-215ENST00000580879 LACTBP83111 547 aaPredicted RBP15.82■□□□□ 0.12
NUP85-215ENST00000580879 ATP2B2Q01814 1243 aa15.82■□□□□ 0.12
NUP85-215ENST00000580879 ICA1Q05084 483 aa15.82■□□□□ 0.12
NUP85-215ENST00000580879 PPARAQ07869 468 aa15.82■□□□□ 0.12
NUP85-215ENST00000580879 PABPC4Q13310 644 aaKnown RBP eCLIP15.82■□□□□ 0.12
NUP85-215ENST00000580879 ANKRD13CQ8N6S4 541 aa15.82■□□□□ 0.12
NUP85-215ENST00000580879 KIAA1683Q9H0B3 1180 aa15.82■□□□□ 0.12
NUP85-215ENST00000580879 CCDC171Q6TFL3 1326 aa15.82■□□□□ 0.12
NUP85-215ENST00000580879 ZSWIM8A7E2V4 1837 aa15.82■□□□□ 0.12
NUP85-215ENST00000580879 CCDC85CA6NKD9 419 aa15.81■□□□□ 0.12
NUP85-215ENST00000580879 PEX10O60683 326 aa15.81■□□□□ 0.12
NUP85-215ENST00000580879 MYH8P13535 1937 aa15.81■□□□□ 0.12
NUP85-215ENST00000580879 CTDSPL2Q05D32 466 aa15.81■□□□□ 0.12
NUP85-215ENST00000580879 KIF22Q14807 665 aa15.81■□□□□ 0.12
NUP85-215ENST00000580879 PKN2Q16513 984 aaKnown RBP15.81■□□□□ 0.12
NUP85-215ENST00000580879 CENPQQ7L2Z9 268 aaPredicted RBP15.81■□□□□ 0.12
NUP85-215ENST00000580879 TICAM2Q86XR7 235 aa15.81■□□□□ 0.12
NUP85-215ENST00000580879 SIAH1Q8IUQ4 282 aa15.81■□□□□ 0.12
NUP85-215ENST00000580879 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.81■□□□□ 0.12
NUP85-215ENST00000580879 HPS5Q9UPZ3 1129 aa15.81■□□□□ 0.12
NUP85-215ENST00000580879 HTTP42858 3142 aa15.8■□□□□ 0.12
NUP85-215ENST00000580879 NEFLP07196 543 aa15.8■□□□□ 0.12
NUP85-215ENST00000580879 HSPD1P10809 573 aaKnown RBP15.8■□□□□ 0.12
NUP85-215ENST00000580879 VCAM1P19320 739 aa15.8■□□□□ 0.12
NUP85-215ENST00000580879 PSMC4P43686 418 aa15.8■□□□□ 0.12
NUP85-215ENST00000580879 USP14P54578 494 aa15.8■□□□□ 0.12
NUP85-215ENST00000580879 KIAA1755Q5JYT7 1200 aa15.8■□□□□ 0.12
NUP85-215ENST00000580879 FBXO46Q6PJ61 603 aaPredicted RBP15.8■□□□□ 0.12
NUP85-215ENST00000580879 C12orf42Q96LP6 360 aa15.8■□□□□ 0.12
NUP85-215ENST00000580879 P2RX7Q99572 595 aaKnown RBP15.8■□□□□ 0.12
NUP85-215ENST00000580879 INCENPQ9NQS7 918 aa15.8■□□□□ 0.12
NUP85-215ENST00000580879 HIP1O00291 1037 aa15.79■□□□□ 0.12
NUP85-215ENST00000580879 FMNL1O95466 1100 aaPredicted RBP15.79■□□□□ 0.12
NUP85-215ENST00000580879 FGAP02671 866 aa15.79■□□□□ 0.12
NUP85-215ENST00000580879 EEF2P13639 858 aaKnown RBP15.79■□□□□ 0.12
NUP85-215ENST00000580879 HOXA7P31268 230 aaPredicted RBP15.79■□□□□ 0.12
NUP85-215ENST00000580879 ZNF444Q8N0Y2 327 aaPredicted RBP15.79■□□□□ 0.12
NUP85-215ENST00000580879 SPICE1Q8N0Z3 855 aa15.79■□□□□ 0.12
NUP85-215ENST00000580879 TRIM47Q96LD4 638 aa15.79■□□□□ 0.12
NUP85-215ENST00000580879 RPAP3Q9H6T3 665 aaPredicted RBP15.79■□□□□ 0.12
NUP85-215ENST00000580879 KANSL2Q9H9L4 492 aa15.79■□□□□ 0.12
NUP85-215ENST00000580879 ARHGEF10LQ9HCE6 1279 aa15.79■□□□□ 0.12
NUP85-215ENST00000580879 PTPN22Q9Y2R2 807 aa15.79■□□□□ 0.12
NUP85-215ENST00000580879 TACC3Q9Y6A5 838 aa15.79■□□□□ 0.12
NUP85-215ENST00000580879 USP17L15C9J2P7 530 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 USP17L13C9JLJ4 530 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 USP17L11C9JVI0 530 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 USP17L18D6R9N7 530 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 USP17L22D6RA61 530 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 USP17L17D6RBQ6 530 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 USP17L19D6RCP7 530 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 USP17L20D6RJB6 530 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 SLC3A2P08195 630 aaKnown RBP15.78■□□□□ 0.12
NUP85-215ENST00000580879 HERVK_113P62684 666 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 PDE4BQ07343 736 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 USP17L24Q0WX57 530 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 ARHGEF6Q15052 776 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 ALX1Q15699 326 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 FAM47AQ5JRC9 791 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 CCDC136Q96JN2 1154 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 IL25Q9H293 177 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 ZNF287Q9HBT7 754 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 TMX2Q9Y320 296 aa15.78■□□□□ 0.12
NUP85-215ENST00000580879 RAD21O60216 631 aa15.77■□□□□ 0.12
NUP85-215ENST00000580879 GCLCP48506 637 aaPredicted RBP15.77■□□□□ 0.12
NUP85-215ENST00000580879 MFAP1P55081 439 aaKnown RBP15.77■□□□□ 0.12
NUP85-215ENST00000580879 HAND2P61296 217 aa15.77■□□□□ 0.12
NUP85-215ENST00000580879 FAM110CQ1W6H9 321 aa15.77■□□□□ 0.12
NUP85-215ENST00000580879 CATSPERGQ6ZRH7 1159 aa15.77■□□□□ 0.12
NUP85-215ENST00000580879 PAGR1Q9BTK6 254 aa15.77■□□□□ 0.12
NUP85-215ENST00000580879 TXNRD2Q9NNW7 524 aa15.77■□□□□ 0.12
NUP85-215ENST00000580879 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.77■□□□□ 0.12
NUP85-215ENST00000580879 PTCH2Q9Y6C5 1203 aa15.77■□□□□ 0.12
NUP85-215ENST00000580879 CENPBP07199 599 aaPredicted RBP15.76■□□□□ 0.11
NUP85-215ENST00000580879 TSPY3P0CV98 308 aa15.76■□□□□ 0.11
NUP85-215ENST00000580879 TSPY8P0CW00 308 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms