RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 HAND2P61296 217 aa18.29■□□□□ 0.52
IFT20-206ENST00000578122 SEPT2Q15019 361 aa18.29■□□□□ 0.52
IFT20-206ENST00000578122 TMEM179Q6ZVK1 233 aa18.29■□□□□ 0.52
IFT20-206ENST00000578122 IFNL1Q8IU54 200 aa18.29■□□□□ 0.52
IFT20-206ENST00000578122 ZNF444Q8N0Y2 327 aaPredicted RBP18.29■□□□□ 0.52
IFT20-206ENST00000578122 CTNNA3Q9UI47 895 aa18.29■□□□□ 0.52
IFT20-206ENST00000578122 IGF2BP3O00425 579 aaKnown RBP eCLIP18.28■□□□□ 0.52
IFT20-206ENST00000578122 PRDM1O75626 825 aa18.28■□□□□ 0.52
IFT20-206ENST00000578122 PTH1RQ03431 593 aa18.28■□□□□ 0.52
IFT20-206ENST00000578122 OTUD7BQ6GQQ9 843 aa18.28■□□□□ 0.52
IFT20-206ENST00000578122 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
IFT20-206ENST00000578122 PTPN18Q99952 460 aa18.28■□□□□ 0.52
IFT20-206ENST00000578122 RNF186Q9NXI6 227 aa18.28■□□□□ 0.52
IFT20-206ENST00000578122 A0A0G2JLL6 359 aaPredicted RBP18.27■□□□□ 0.52
IFT20-206ENST00000578122 ZNF213O14771 459 aa18.27■□□□□ 0.52
IFT20-206ENST00000578122 CA12O43570 354 aa18.27■□□□□ 0.52
IFT20-206ENST00000578122 FASTKD5Q7L8L6 764 aaKnown RBP18.27■□□□□ 0.52
IFT20-206ENST00000578122 PRRT2Q7Z6L0 340 aaPredicted RBP18.27■□□□□ 0.52
IFT20-206ENST00000578122 INCENPQ9NQS7 918 aa18.27■□□□□ 0.52
IFT20-206ENST00000578122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.27■□□□□ 0.52
IFT20-206ENST00000578122 GREB1LQ9C091 1923 aaPredicted RBP18.27■□□□□ 0.51
IFT20-206ENST00000578122 BTBD19C9JJ37 291 aa18.26■□□□□ 0.51
IFT20-206ENST00000578122 USP17L10C9JJH3 530 aa18.26■□□□□ 0.51
IFT20-206ENST00000578122 TRPA1O75762 1119 aa18.26■□□□□ 0.51
IFT20-206ENST00000578122 ALDH1A1P00352 501 aa18.26■□□□□ 0.51
IFT20-206ENST00000578122 BACE1P56817 501 aa18.26■□□□□ 0.51
IFT20-206ENST00000578122 MOGSQ13724 837 aa18.26■□□□□ 0.51
IFT20-206ENST00000578122 IMMTQ16891 758 aaKnown RBP18.26■□□□□ 0.51
IFT20-206ENST00000578122 GADL1Q6ZQY3 521 aa18.26■□□□□ 0.51
IFT20-206ENST00000578122 NBPF3Q9H094 633 aa18.26■□□□□ 0.51
IFT20-206ENST00000578122 SAGE1Q9NXZ1 904 aa18.26■□□□□ 0.51
IFT20-206ENST00000578122 TACC3Q9Y6A5 838 aa18.26■□□□□ 0.51
IFT20-206ENST00000578122 LOC285556D6RIA3 1793 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 C19orf81C9J6K1 198 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 ORC4O43929 436 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 FGRP09769 529 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 MNX1P50219 401 aaPredicted RBP18.25■□□□□ 0.51
IFT20-206ENST00000578122 CLCN6P51797 869 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 HMGCS2P54868 508 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 MTMR2Q13614 643 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 SH3D19Q5HYK7 790 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 AKNAD1Q5T1N1 836 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 TBC1D10CQ8IV04 446 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 FAM43AQ8N2R8 423 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 ACER1Q8TDN7 264 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 FEZ1Q99689 392 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.25■□□□□ 0.51
IFT20-206ENST00000578122 KANSL2Q9H9L4 492 aa18.25■□□□□ 0.51
IFT20-206ENST00000578122 FOXN1O15353 648 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 TFAP4Q01664 338 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 ICA1Q05084 483 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 FAM47AQ5JRC9 791 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 GPAT2Q6NUI2 795 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 MFSD6Q6ZSS7 791 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 ANKRD23Q86SG2 305 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 CLEC10AQ8IUN9 316 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 ZNF579Q8NAF0 562 aaKnown RBP18.24■□□□□ 0.51
IFT20-206ENST00000578122 STAG1Q8WVM7 1258 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 LSG1Q9H089 658 aaKnown RBP18.24■□□□□ 0.51
IFT20-206ENST00000578122 RNF41Q9H4P4 317 aaPredicted RBP18.24■□□□□ 0.51
IFT20-206ENST00000578122 ARHGEF10LQ9HCE6 1279 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 TOMM22Q9NS69 142 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 TMOD4Q9NZQ9 345 aa18.24■□□□□ 0.51
IFT20-206ENST00000578122 RANBP6O60518 1105 aaKnown RBP18.23■□□□□ 0.51
IFT20-206ENST00000578122 TSPY3P0CV98 308 aa18.23■□□□□ 0.51
IFT20-206ENST00000578122 TSPY8P0CW00 308 aa18.23■□□□□ 0.51
IFT20-206ENST00000578122 PCP11498 1178 aaKnown RBP18.23■□□□□ 0.51
IFT20-206ENST00000578122 RRP12Q5JTH9 1297 aaKnown RBP18.23■□□□□ 0.51
IFT20-206ENST00000578122 USP17L2Q6R6M4 530 aa18.23■□□□□ 0.51
IFT20-206ENST00000578122 SIAH1Q8IUQ4 282 aa18.23■□□□□ 0.51
IFT20-206ENST00000578122 PROCA1Q8NCQ7 364 aaPredicted RBP18.23■□□□□ 0.51
IFT20-206ENST00000578122 NEDD1Q8NHV4 660 aa18.23■□□□□ 0.51
IFT20-206ENST00000578122 KIAA1683Q9H0B3 1180 aa18.23■□□□□ 0.51
IFT20-206ENST00000578122 ZCCHC17Q9NP64 241 aaKnown RBP18.23■□□□□ 0.51
IFT20-206ENST00000578122 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
IFT20-206ENST00000578122 TSKSQ9UJT2 592 aa18.23■□□□□ 0.51
IFT20-206ENST00000578122 RBM8AQ9Y5S9 174 aaKnown RBP18.23■□□□□ 0.51
IFT20-206ENST00000578122 MYH4Q9Y623 1939 aa18.23■□□□□ 0.51
IFT20-206ENST00000578122 PLIN4Q96Q06 1357 aa18.22■□□□□ 0.51
IFT20-206ENST00000578122 IGKV6D-41A0A0C4DH26 115 aa18.22■□□□□ 0.51
IFT20-206ENST00000578122 TSPY2A6NKD2 308 aa18.22■□□□□ 0.51
IFT20-206ENST00000578122 PDHXO00330 501 aa18.22■□□□□ 0.51
IFT20-206ENST00000578122 TBC1D8O95759 1140 aa18.22■□□□□ 0.51
IFT20-206ENST00000578122 EEF2P13639 858 aaKnown RBP18.22■□□□□ 0.51
IFT20-206ENST00000578122 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
IFT20-206ENST00000578122 ATP2B2Q01814 1243 aa18.22■□□□□ 0.51
IFT20-206ENST00000578122 DGKZQ13574 1117 aa18.22■□□□□ 0.51
IFT20-206ENST00000578122 TAF1CQ15572 869 aaPredicted RBP18.22■□□□□ 0.51
IFT20-206ENST00000578122 ZYXQ15942 572 aaKnown RBP18.22■□□□□ 0.51
IFT20-206ENST00000578122 EMILIN3Q9NT22 766 aa18.22■□□□□ 0.51
IFT20-206ENST00000578122 AGTPBP1Q9UPW5 1226 aa18.22■□□□□ 0.51
IFT20-206ENST00000578122 A0A1W2PRG0 241 aa18.21■□□□□ 0.51
IFT20-206ENST00000578122 HSPA8P11142 646 aaKnown RBP18.21■□□□□ 0.51
IFT20-206ENST00000578122 USP14P54578 494 aa18.21■□□□□ 0.51
IFT20-206ENST00000578122 TREML2Q5T2D2 321 aa18.21■□□□□ 0.51
IFT20-206ENST00000578122 CEP95Q96GE4 821 aa18.21■□□□□ 0.51
IFT20-206ENST00000578122 CFHR5Q9BXR6 569 aa18.21■□□□□ 0.51
IFT20-206ENST00000578122 SH2D4AQ9H788 454 aa18.21■□□□□ 0.51
IFT20-206ENST00000578122 SLC45A1Q9Y2W3 748 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms