RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ZSCAN29Q8IWY8 852 aaPredicted RBP14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 FAM89AQ96GI7 184 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 EIF3CQ99613 913 aaKnown RBP14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 SAMSN1Q9NSI8 373 aaKnown RBP14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 H7C1D1 291 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 BAG3O95817 575 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 COPB1P53618 953 aaKnown RBP14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 SETDB1Q15047 1291 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 STXBP4Q6ZWJ1 553 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 ACRBPQ8NEB7 543 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 FAM207AQ9NSI2 230 aaPredicted RBP14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 FBXO3Q9UK99 471 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 SAMM50Q9Y512 469 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 GRIPAP1Q4V328 841 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 CACNA2D3Q8IZS8 1091 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 hCG_1642624A0A1W2PR95 340 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 CCZ1BP86790 482 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 CCZ1P86791 482 aaPredicted RBP14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 ZMYM1Q5SVZ6 1142 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 KCTD16Q68DU8 428 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 TRIM31Q9BZY9 425 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 MAN1B1Q9UKM7 699 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 LDHCP07864 332 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 ATP11AP98196 1134 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 IQCB1Q15051 598 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 LETM2Q2VYF4 491 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 FMNL3Q8IVF7 1028 aa14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 FMR1NBQ8N0W7 255 aaPredicted RBP14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 UTP11Q9Y3A2 253 aaKnown RBP14.62□□□□□ -0.07
PCDHGB3-201ENST00000576222 IRS4O14654 1257 aaPredicted RBP14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 GNA11P29992 359 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 RRAGAQ7L523 313 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 DHX40Q8IX18 779 aaKnown RBP14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 DDX12PQ92771 950 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 PANX2Q96RD6 677 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 NLRP1Q9C000 1473 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 TADA3O75528 432 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 NEBLO76041 1014 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 CALCOCO2Q13137 446 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 MTMR3Q13615 1198 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 RPS6KA1Q15418 735 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 ARMCX5Q6P1M9 558 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 SYCP3Q8IZU3 236 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 GSDMAQ96QA5 445 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 ZNF532Q9HCE3 1301 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 SF3A3Q12874 501 aaKnown RBP eCLIP14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 VWA3BQ502W6 1294 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 E4F1Q66K89 784 aaPredicted RBP14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 MMS22LQ6ZRQ5 1243 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 BPIFA3Q9BQP9 254 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 TRIM7Q9C029 511 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 CPSF2Q9P2I0 782 aaKnown RBP14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 CLGNO14967 610 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 SASH1O94885 1247 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 AKNAD1Q5T1N1 836 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 TADA2BQ86TJ2 420 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 ERMNQ8TAM6 284 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 IQCDQ96DY2 449 aa14.61□□□□□ -0.07
PCDHGB3-201ENST00000576222 MEX3CQ5U5Q3 659 aaKnown RBP14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 MCTP2Q6DN12 878 aa14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 CFAP74Q9C0B2 1584 aa14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 ACTN4O43707 911 aaKnown RBP14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 CTNNA1P35221 906 aaKnown RBP14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 APBA1Q02410 837 aa14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 TMEM132AQ24JP5 1023 aa14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 ZCRB1Q8TBF4 217 aaKnown RBP14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 ZNF496Q96IT1 587 aaPredicted RBP14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 NAP1L3Q99457 506 aaPredicted RBP14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 ANKIB1Q9P2G1 1089 aa14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 PCK1P35558 622 aa14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 TOGARAM2Q6ZUX3 1019 aa14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 INTS8Q75QN2 995 aaKnown RBP14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 CMTR1Q8N1G2 835 aaKnown RBP14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 TMEM110-MUSTN1A8MSY1 372 aa14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 ERCC3P19447 782 aa14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 CTNNA2P26232 953 aa14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 ZBTB16Q05516 673 aa14.6□□□□□ -0.07
PCDHGB3-201ENST00000576222 TMEM232C9JQI7 657 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 PRDM1O75626 825 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 IFT88Q13099 833 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 PROSER3Q2NL68 480 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 NCAPH2Q6IBW4 605 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 ZNF654Q8IZM8 581 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 GKAP1Q5VSY0 366 aaPredicted RBP14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 GRAMD1CQ8IYS0 662 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 VEZTQ9HBM0 779 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 NKIRAS1Q9NYS0 192 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 GTPBP6O43824 516 aaPredicted RBP14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 ITGA6P23229 1130 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 SLC8A1P32418 973 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 ATP7BP35670 1465 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 PPP1R7Q15435 360 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 ASIC2Q16515 512 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 LMNTD2Q8IXW0 634 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 CSRNP2Q9H175 543 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 NLRC4Q9NPP4 1024 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 CDK12Q9NYV4 1490 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms