RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 RAD21O60216 631 aa11.48□□□□□ -0.57
NPLOC4-210ENST00000572824 MYCP01106 439 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-210ENST00000572824 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
NPLOC4-210ENST00000572824 SH3BP5LQ7L8J4 393 aa11.48□□□□□ -0.57
NPLOC4-210ENST00000572824 C1orf115Q9H7X2 142 aa11.48□□□□□ -0.57
NPLOC4-210ENST00000572824 DDX4Q9NQI0 724 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-210ENST00000572824 CEP290O15078 2479 aa11.48□□□□□ -0.57
NPLOC4-210ENST00000572824 FOCADQ5VW36 1801 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 FAM196BA6NMK8 535 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 CIAO1O76071 339 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 TNNI2P48788 182 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 HDLBPQ00341 1268 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 TAF1CQ15572 869 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 HHIPL2Q6UWX4 724 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 FRAT1Q92837 279 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 API5Q9BZZ5 524 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 GDPD2Q9HCC8 539 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 COPRSQ9NQ92 184 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 MAP10Q9P2G4 905 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 CEP126Q9P2H0 1117 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 PTPN22Q9Y2R2 807 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 PTCH2Q9Y6C5 1203 aa11.47□□□□□ -0.57
NPLOC4-210ENST00000572824 CCER2I3L3R5 266 aa11.46□□□□□ -0.57
NPLOC4-210ENST00000572824 SRGAP3O43295 1099 aa11.46□□□□□ -0.57
NPLOC4-210ENST00000572824 ALDH1A1P00352 501 aa11.46□□□□□ -0.57
NPLOC4-210ENST00000572824 MOGSQ13724 837 aa11.46□□□□□ -0.57
NPLOC4-210ENST00000572824 INTS3Q68E01 1043 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-210ENST00000572824 TBC1D9Q6ZT07 1266 aa11.46□□□□□ -0.57
NPLOC4-210ENST00000572824 FAM83AQ86UY5 434 aa11.46□□□□□ -0.57
NPLOC4-210ENST00000572824 TMEM57Q8N5G2 664 aa11.46□□□□□ -0.57
NPLOC4-210ENST00000572824 WDR66Q8TBY9 1149 aa11.46□□□□□ -0.57
NPLOC4-210ENST00000572824 CSADQ9Y600 493 aa11.46□□□□□ -0.57
NPLOC4-210ENST00000572824 NDUFB9Q9Y6M9 179 aa11.46□□□□□ -0.57
NPLOC4-210ENST00000572824 MAST3O60307 1309 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 ADGRA2Q96PE1 1338 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 A0A1B0GUL7 405 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 DDTLA6NHG4 134 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 LDHBP07195 334 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 RLBP1P12271 317 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 CTHP32929 405 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 IL15P40933 162 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 RGS3P49796 1198 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 SP3Q02447 781 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 KCNH2Q12809 1159 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 PICALMQ13492 652 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 PKN2Q16513 984 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 FAM151AQ8WW52 585 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 XAGE2Q96GT9 111 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 USP40Q9NVE5 1235 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 TMOD2Q9NZR1 351 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 CPA4Q9UI42 421 aa11.45□□□□□ -0.58
NPLOC4-210ENST00000572824 LOC285556D6RIA3 1793 aa11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 GAKO14976 1311 aa11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 SALL1Q9NSC2 1324 aa11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 GPR37L1O60883 481 aa11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 WDHD1O75717 1129 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 EN2P19622 333 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 GTF2A2P52657 109 aa11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 INHBEP58166 350 aa11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 PPIL2Q13356 520 aa11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 SHROOM1Q2M3G4 852 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 ERO1BQ86YB8 467 aa11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 SH3TC2Q8TF17 1288 aa11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 EFCC1Q9HA90 598 aa11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 ABCF2Q9UG63 623 aa11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 FCF1Q9Y324 198 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-210ENST00000572824 UNCXA6NJT0 531 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 CT47B1P0C2W7 299 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 MCAMP43121 646 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 BTDP43251 543 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 MECOMQ03112 1051 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 MTX1Q13505 466 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 RRP1BQ14684 758 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 FKBP1CQ5VVH2 108 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 ERO1AQ96HE7 468 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 MRIQ9BWK5 157 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 ZNF341Q9BYN7 854 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 HMG20BQ9P0W2 317 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 ZNF112Q9UJU3 913 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 DENND2AQ9ULE3 1009 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 SUGT1Q9Y2Z0 365 aa11.43□□□□□ -0.58
NPLOC4-210ENST00000572824 PHF20L1A8MW92 1017 aa11.42□□□□□ -0.58
NPLOC4-210ENST00000572824 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
NPLOC4-210ENST00000572824 CYP2C8P10632 490 aa11.42□□□□□ -0.58
NPLOC4-210ENST00000572824 RHBDL3P58872 404 aa11.42□□□□□ -0.58
NPLOC4-210ENST00000572824 PTCRAQ6ISU1 281 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-210ENST00000572824 PPP1R18Q6NYC8 613 aa11.42□□□□□ -0.58
NPLOC4-210ENST00000572824 ATF7IPQ6VMQ6 1270 aa11.42□□□□□ -0.58
NPLOC4-210ENST00000572824 NEUROD6Q96NK8 337 aa11.42□□□□□ -0.58
NPLOC4-210ENST00000572824 TLR7Q9NYK1 1049 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-210ENST00000572824 MROH7-TTC4A0A0A0MT08 1334 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 ALPK3Q96L96 1907 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 TLR2O60603 784 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 CETPP11597 493 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 GGCXP38435 758 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 ABL2P42684 1182 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 LACTBP83111 547 aaPredicted RBP11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 SNAPC2Q13487 334 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms