RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ICA1Q05084 483 aa17.13■□□□□ 0.33
NPLOC4-209ENST00000572760 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
NPLOC4-209ENST00000572760 FAM155AB1AL88 458 aaPredicted RBP17.12■□□□□ 0.33
NPLOC4-209ENST00000572760 CXCL11O14625 94 aa17.12■□□□□ 0.33
NPLOC4-209ENST00000572760 GUCY1A2P33402 732 aa17.12■□□□□ 0.33
NPLOC4-209ENST00000572760 GJA5P36382 358 aa17.12■□□□□ 0.33
NPLOC4-209ENST00000572760 GTF2A2P52657 109 aa17.12■□□□□ 0.33
NPLOC4-209ENST00000572760 SNAPC2Q13487 334 aa17.12■□□□□ 0.33
NPLOC4-209ENST00000572760 KRT32Q14532 448 aa17.12■□□□□ 0.33
NPLOC4-209ENST00000572760 IQCA1Q86XH1 822 aa17.12■□□□□ 0.33
NPLOC4-209ENST00000572760 WDR18Q9BV38 432 aa17.12■□□□□ 0.33
NPLOC4-209ENST00000572760 AFG3L2Q9Y4W6 797 aa17.12■□□□□ 0.33
NPLOC4-209ENST00000572760 MANSC4A6NHS7 340 aaPredicted RBP17.11■□□□□ 0.33
NPLOC4-209ENST00000572760 USP17L10C9JJH3 530 aa17.11■□□□□ 0.33
NPLOC4-209ENST00000572760 AOC2O75106 756 aa17.11■□□□□ 0.33
NPLOC4-209ENST00000572760 SEC24BO95487 1268 aa17.11■□□□□ 0.33
NPLOC4-209ENST00000572760 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
NPLOC4-209ENST00000572760 STOX1Q6ZVD7 989 aa17.11■□□□□ 0.33
NPLOC4-209ENST00000572760 CLEC10AQ8IUN9 316 aa17.11■□□□□ 0.33
NPLOC4-209ENST00000572760 UBAC1Q9BSL1 405 aa17.11■□□□□ 0.33
NPLOC4-209ENST00000572760 SH2D4AQ9H788 454 aa17.11■□□□□ 0.33
NPLOC4-209ENST00000572760 UPF2Q9HAU5 1272 aaKnown RBP17.11■□□□□ 0.33
NPLOC4-209ENST00000572760 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
NPLOC4-209ENST00000572760 CCL15-CCL14A0A0B4J2E2 113 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 C19orf81C9J6K1 198 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 RAD21O60216 631 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 CETPP11597 493 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 EEF2P13639 858 aaKnown RBP17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 SREBF2Q12772 1141 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 ZYXQ15942 572 aaKnown RBP17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 CCL15Q16663 113 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 CCDC178Q5BJE1 867 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 GADL1Q6ZQY3 521 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 RASEFQ8IZ41 740 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 ACER1Q8TDN7 264 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 CEP95Q96GE4 821 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 ZKSCAN3Q9BRR0 538 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 TMOD4Q9NZQ9 345 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 ZSWIM5Q9P217 1185 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 CLIP2Q9UDT6 1046 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 STX8Q9UNK0 236 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 KCNH4Q9UQ05 1017 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 PLIN4Q96Q06 1357 aa17.1■□□□□ 0.33
NPLOC4-209ENST00000572760 ERICH2A1L162 156 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 TTLL1O95922 423 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 MAP2K2P36507 400 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 USP14P54578 494 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 BACE1P56817 501 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 INHBEP58166 350 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 MTMR2Q13614 643 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 TSGA10IPQ3SY00 556 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 USP17L2Q6R6M4 530 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 REM2Q8IYK8 340 aaPredicted RBP17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 NEK1Q96PY6 1258 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 MTMR4Q9NYA4 1195 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 NYAP2Q9P242 653 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
NPLOC4-209ENST00000572760 IGKV6D-41A0A0C4DH26 115 aa17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 NMT2O60551 498 aa17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 PSMA5P28066 241 aa17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 MCM5P33992 734 aa17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 HMGCS2P54868 508 aa17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 SART3Q15020 963 aaKnown RBP17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 OTUD7BQ6GQQ9 843 aa17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 FASTKD5Q7L8L6 764 aaKnown RBP17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 KCNB2Q92953 911 aa17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 ZIC5Q96T25 663 aa17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 TCP11L1Q9NUJ3 509 aa17.08■□□□□ 0.32
NPLOC4-209ENST00000572760 A0A0G2JLL6 359 aaPredicted RBP17.07■□□□□ 0.32
NPLOC4-209ENST00000572760 IFIT3O14879 490 aaKnown RBP17.07■□□□□ 0.32
NPLOC4-209ENST00000572760 CYB5R4Q7L1T6 521 aa17.07■□□□□ 0.32
NPLOC4-209ENST00000572760 CHST3Q7LGC8 479 aa17.07■□□□□ 0.32
NPLOC4-209ENST00000572760 PRRT2Q7Z6L0 340 aaPredicted RBP17.07■□□□□ 0.32
NPLOC4-209ENST00000572760 MB21D2Q8IYB1 491 aaPredicted RBP17.07■□□□□ 0.32
NPLOC4-209ENST00000572760 ZSCAN10Q96SZ4 725 aaPredicted RBP17.07■□□□□ 0.32
NPLOC4-209ENST00000572760 KIAA1683Q9H0B3 1180 aa17.07■□□□□ 0.32
NPLOC4-209ENST00000572760 GOPCQ9HD26 462 aa17.07■□□□□ 0.32
NPLOC4-209ENST00000572760 IL17RBQ9NRM6 502 aa17.07■□□□□ 0.32
NPLOC4-209ENST00000572760 TMX2Q9Y320 296 aa17.07■□□□□ 0.32
NPLOC4-209ENST00000572760 TNKSO95271 1327 aa17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 A0A1W2PRG0 241 aa17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 PRC1O43663 620 aa17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 ADCK5Q3MIX3 580 aa17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 BLOC1S2Q6QNY1 142 aa17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 SIAH1Q8IUQ4 282 aa17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 LRRC47Q8N1G4 583 aaKnown RBP17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 NKX2-3Q8TAU0 364 aa17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 BRI3BPQ8WY22 251 aa17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 MS4A4AQ96JQ5 239 aa17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 TTC14Q96N46 770 aa17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 LOC285556D6RIA3 1793 aa17.06■□□□□ 0.32
NPLOC4-209ENST00000572760 TOP1P11387 765 aaKnown RBP17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 FGD1P98174 961 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 WTAPQ15007 396 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 TMEM67Q5HYA8 995 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 SH3D19Q5HYK7 790 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 IFIT1BQ5T764 474 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms