RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 C8orf86Q6ZUL3 223 aa7.81□□□□□ -1.16
SF3B3-214ENST00000572365 DDX54Q8TDD1 881 aaKnown RBP7.81□□□□□ -1.16
SF3B3-214ENST00000572365 GPRASP2Q96D09 838 aa7.81□□□□□ -1.16
SF3B3-214ENST00000572365 CYP8B1Q9UNU6 501 aa7.81□□□□□ -1.16
SF3B3-214ENST00000572365 FMN2Q9NZ56 1722 aa7.81□□□□□ -1.16
SF3B3-214ENST00000572365 SBF2Q86WG5 1849 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 COL14A1Q05707 1796 aaKnown RBP7.8□□□□□ -1.16
SF3B3-214ENST00000572365 GREM1O60565 184 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 WFS1O76024 890 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 PF4P02776 101 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 CELA2BP08218 269 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-214ENST00000572365 ARNTP27540 789 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 CAMK2GQ13555 558 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-214ENST00000572365 COL9A3Q14050 684 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-214ENST00000572365 RASIP1Q5U651 963 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 MSL1Q68DK7 614 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 SCARA3Q6AZY7 606 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 LYPD4Q6UWN0 246 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 CCDC84Q86UT8 332 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-214ENST00000572365 WFDC8Q8IUA0 241 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 SULF2Q8IWU5 870 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 TRIM42Q8IWZ5 723 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 STK35Q8TDR2 534 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 ZNF296Q8WUU4 475 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-214ENST00000572365 SPATA32Q96LK8 384 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 HIRIP3Q9BW71 556 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-214ENST00000572365 SUPT16HQ9Y5B9 1047 aaKnown RBP7.8□□□□□ -1.16
SF3B3-214ENST00000572365 SHANK3Q9BYB0 1731 aa7.8□□□□□ -1.16
SF3B3-214ENST00000572365 ADGRF5Q8IZF2 1346 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 HSPA6P17066 643 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 HTRA3P83110 453 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 ARID5AQ03989 594 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 ZNF252P-AS1Q0IIN9 211 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 C19orf57Q0VDD7 668 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 AP3B2Q13367 1082 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 FAM117BQ6P1L5 589 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 PDZD3Q86UT5 571 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 NLGN2Q8NFZ4 835 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 EAF1Q96JC9 268 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-214ENST00000572365 NT5C1AQ9BXI3 368 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 EMILIN2Q9BXX0 1053 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 OSGEPQ9NPF4 335 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 PRKAG2Q9UGJ0 569 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 PARD3Q8TEW0 1356 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 KIAA0232Q92628 1395 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 CDC42BPGQ6DT37 1551 aa7.79□□□□□ -1.16
SF3B3-214ENST00000572365 LINC01387J3KSC0 135 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 TM4SF5O14894 197 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 FSCN2O14926 492 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 NID1P14543 1247 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 YBX3P16989 372 aaKnown RBP eCLIP7.78□□□□□ -1.164e-13■■■□□ 17
SF3B3-214ENST00000572365 CDC25BP30305 580 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 FAM160A1Q05DH4 1040 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 LRRC14Q15048 493 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 HGSNATQ68CP4 663 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 LLGL2Q6P1M3 1020 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 VPS37DQ86XT2 251 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 GOLM1Q8NBJ4 401 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 TANGO6Q9C0B7 1094 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 NRSN2Q9GZP1 204 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 STK32BQ9NY57 414 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 VPS8Q8N3P4 1428 aa7.78□□□□□ -1.16
SF3B3-214ENST00000572365 SBNO1A3KN83 1393 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 ARHGEF10O15013 1369 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 HOXB4P17483 251 aaPredicted RBP7.77□□□□□ -1.17
SF3B3-214ENST00000572365 ATF4P18848 351 aaPredicted RBP7.77□□□□□ -1.17
SF3B3-214ENST00000572365 AMPD1P23109 780 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 DGKGP49619 791 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 ARL4DP49703 201 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 SLC15A2Q16348 729 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 SNAP47Q5SQN1 464 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 TXNDC11Q6PKC3 985 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 MAP4K3Q8IVH8 894 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 WHAMMQ8TF30 809 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 SLC7A3Q8WY07 619 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 UBXN4Q92575 508 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 SEC16BQ96JE7 1060 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 CACNA2D2Q9NY47 1150 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 PCDHB5Q9Y5E4 795 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 IFT172Q9UG01 1749 aa7.77□□□□□ -1.17
SF3B3-214ENST00000572365 KIF1AQ12756 1690 aa7.76□□□□□ -1.17
SF3B3-214ENST00000572365 CYP11A1P05108 521 aa7.76□□□□□ -1.17
SF3B3-214ENST00000572365 GSTP1P09211 210 aaKnown RBP7.76□□□□□ -1.17
SF3B3-214ENST00000572365 DNAJA1P31689 397 aaKnown RBP7.76□□□□□ -1.17
SF3B3-214ENST00000572365 GSTM4Q03013 218 aa7.76□□□□□ -1.17
SF3B3-214ENST00000572365 SETDB1Q15047 1291 aa7.76□□□□□ -1.17
SF3B3-214ENST00000572365 TXNRD1Q16881 649 aa7.76□□□□□ -1.17
SF3B3-214ENST00000572365 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
SF3B3-214ENST00000572365 KLHL23Q8NBE8 558 aa7.76□□□□□ -1.17
SF3B3-214ENST00000572365 GRIN3AQ8TCU5 1115 aa7.76□□□□□ -1.17
SF3B3-214ENST00000572365 GATAD2BQ8WXI9 593 aa7.76□□□□□ -1.17
SF3B3-214ENST00000572365 LRRC3Q9BY71 257 aa7.76□□□□□ -1.17
SF3B3-214ENST00000572365 MTFR1LQ9H019 292 aa7.76□□□□□ -1.17
SF3B3-214ENST00000572365 MIR1-1HGQ9H1L0 117 aa7.76□□□□□ -1.17
SF3B3-214ENST00000572365 DLC1Q96QB1 1528 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 FAM221AA4D161 298 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 PLSCR1O15162 318 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 F13A1P00488 732 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 FGRP09769 529 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 LMNB1P20700 586 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms