RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 C6orf229H3BNL8 230 aa20.36■□□□□ 0.85
CMTM3-214ENST00000567572 ALDH1B1P30837 517 aa20.36■□□□□ 0.85
CMTM3-214ENST00000567572 CCZ1BP86790 482 aa20.36■□□□□ 0.85
CMTM3-214ENST00000567572 CCZ1P86791 482 aaPredicted RBP20.36■□□□□ 0.85
CMTM3-214ENST00000567572 SBK1Q52WX2 424 aa20.36■□□□□ 0.85
CMTM3-214ENST00000567572 SHC4Q6S5L8 630 aa20.36■□□□□ 0.85
CMTM3-214ENST00000567572 STK11IPQ8N1F8 1099 aa20.36■□□□□ 0.85
CMTM3-214ENST00000567572 ARPP21Q9UBL0 812 aaPredicted RBP20.36■□□□□ 0.85
CMTM3-214ENST00000567572 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.36■□□□□ 0.85
CMTM3-214ENST00000567572 RXRAP19793 462 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 PPP4CP60510 307 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 DIXDC1Q155Q3 683 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 EZH2Q15910 746 aaKnown RBP20.35■□□□□ 0.85
CMTM3-214ENST00000567572 SLC15A2Q16348 729 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 KRI1Q8N9T8 703 aaKnown RBP20.35■□□□□ 0.85
CMTM3-214ENST00000567572 MASTLQ96GX5 879 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 C16orf45Q96MC5 204 aaPredicted RBP20.35■□□□□ 0.85
CMTM3-214ENST00000567572 ZKSCAN3Q9BRR0 538 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 MKRN1Q9UHC7 482 aaKnown RBP20.35■□□□□ 0.85
CMTM3-214ENST00000567572 TUBB4AP04350 444 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 MARCKSP29966 332 aaPredicted RBP20.35■□□□□ 0.85
CMTM3-214ENST00000567572 NCAPHQ15003 741 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 SEC23AQ15436 765 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 NBPF11Q86T75 865 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 ZNF710Q8N1W2 664 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 MYH2Q9UKX2 1941 aa20.35■□□□□ 0.85
CMTM3-214ENST00000567572 FAM205AQ6ZU69 1335 aa20.34■□□□□ 0.85
CMTM3-214ENST00000567572 DLEC1Q9Y238 1755 aa20.34■□□□□ 0.85
CMTM3-214ENST00000567572 CBFA2T2O43439 604 aa20.34■□□□□ 0.85
CMTM3-214ENST00000567572 ORC4O43929 436 aa20.34■□□□□ 0.85
CMTM3-214ENST00000567572 LDHCP07864 332 aa20.34■□□□□ 0.85
CMTM3-214ENST00000567572 NYAP1Q6ZVC0 841 aa20.34■□□□□ 0.85
CMTM3-214ENST00000567572 ZNF579Q8NAF0 562 aaKnown RBP20.34■□□□□ 0.85
CMTM3-214ENST00000567572 ANKRD7Q92527 254 aa20.34■□□□□ 0.85
CMTM3-214ENST00000567572 UBAC1Q9BSL1 405 aa20.34■□□□□ 0.85
CMTM3-214ENST00000567572 MYL10Q9BUA6 226 aa20.34■□□□□ 0.85
CMTM3-214ENST00000567572 CEP131Q9UPN4 1083 aa20.34■□□□□ 0.85
CMTM3-214ENST00000567572 MYL5Q02045 173 aa20.33■□□□□ 0.85
CMTM3-214ENST00000567572 EN1Q05925 392 aaPredicted RBP20.33■□□□□ 0.85
CMTM3-214ENST00000567572 FILIP1Q7Z7B0 1213 aa20.33■□□□□ 0.85
CMTM3-214ENST00000567572 TBC1D22AQ8WUA7 517 aa20.33■□□□□ 0.85
CMTM3-214ENST00000567572 ERCC4Q92889 916 aaPredicted RBP20.33■□□□□ 0.85
CMTM3-214ENST00000567572 CCDC94Q9BW85 323 aaPredicted RBP20.33■□□□□ 0.85
CMTM3-214ENST00000567572 RTFDC1Q9BY42 306 aaPredicted RBP20.33■□□□□ 0.85
CMTM3-214ENST00000567572 TNKSO95271 1327 aa20.33■□□□□ 0.85
CMTM3-214ENST00000567572 BAG3O95817 575 aa20.33■□□□□ 0.84
CMTM3-214ENST00000567572 EVX2Q03828 476 aa20.33■□□□□ 0.84
CMTM3-214ENST00000567572 KRBA2Q6ZNG9 492 aa20.33■□□□□ 0.84
CMTM3-214ENST00000567572 CERS3Q8IU89 383 aa20.33■□□□□ 0.84
CMTM3-214ENST00000567572 CRACR2BQ8N4Y2 399 aaPredicted RBP20.33■□□□□ 0.84
CMTM3-214ENST00000567572 SH3RF3Q8TEJ3 882 aaPredicted RBP20.33■□□□□ 0.84
CMTM3-214ENST00000567572 RNF26Q9BY78 433 aaPredicted RBP20.33■□□□□ 0.84
CMTM3-214ENST00000567572 COA1Q9GZY4 146 aa20.33■□□□□ 0.84
CMTM3-214ENST00000567572 NAV1Q8NEY1 1877 aa20.33■□□□□ 0.84
CMTM3-214ENST00000567572 MFSD14BQ5SR56 506 aa20.32■□□□□ 0.84
CMTM3-214ENST00000567572 OLFM4Q6UX06 510 aa20.32■□□□□ 0.84
CMTM3-214ENST00000567572 DIS3L2Q8IYB7 885 aaKnown RBP20.32■□□□□ 0.84
CMTM3-214ENST00000567572 CCDC112Q8NEF3 446 aa20.32■□□□□ 0.84
CMTM3-214ENST00000567572 XPO4Q9C0E2 1151 aaKnown RBP20.32■□□□□ 0.84
CMTM3-214ENST00000567572 KCNH3Q9ULD8 1083 aa20.32■□□□□ 0.84
CMTM3-214ENST00000567572 A0A087WWV3 80 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 SMC2O95347 1197 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 CYP2D6P10635 497 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 PTPN14Q15678 1187 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 CEP135Q66GS9 1140 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 ZNF654Q8IZM8 581 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 FANCBQ8NB91 859 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 ZSCAN10Q96SZ4 725 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-214ENST00000567572 STK32BQ9NY57 414 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 CDK5RAP2Q96SN8 1893 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 DDX60LQ5H9U9 1706 aaKnown RBP20.31■□□□□ 0.84
CMTM3-214ENST00000567572 ROBO3Q96MS0 1386 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 PSDA5PKW4 1024 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-214ENST00000567572 PRDM1O75626 825 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 XBP1P17861 261 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 PTPREP23469 700 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 CCAR2Q8N163 923 aaKnown RBP20.31■□□□□ 0.84
CMTM3-214ENST00000567572 ENAHQ8N8S7 591 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-214ENST00000567572 FAM163AQ96GL9 167 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-214ENST00000567572 MCM9Q9NXL9 1143 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 IFNKQ9P0W0 207 aa20.31■□□□□ 0.84
CMTM3-214ENST00000567572 GPR75-ASB3A0A0A6YYF3 556 aa20.3■□□□□ 0.84
CMTM3-214ENST00000567572 SFPQP23246 707 aaKnown RBP eCLIP20.3■□□□□ 0.84
CMTM3-214ENST00000567572 NT5C2P49902 561 aa20.3■□□□□ 0.84
CMTM3-214ENST00000567572 KANK3Q6NY19 840 aa20.3■□□□□ 0.84
CMTM3-214ENST00000567572 DPP8Q6V1X1 898 aaPredicted RBP20.3■□□□□ 0.84
CMTM3-214ENST00000567572 CNNM3Q8NE01 707 aa20.3■□□□□ 0.84
CMTM3-214ENST00000567572 DACH1Q9UI36 760 aa20.3■□□□□ 0.84
CMTM3-214ENST00000567572 BIN1O00499 593 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 CCP110O43303 1012 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 USP17L8P0C7I0 530 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 CALM1P0DP23 149 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 CALM2P0DP24 149 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 CALM3P0DP25 149 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 USP5P45974 858 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 C12orf60Q5U649 245 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 STYK1Q6J9G0 422 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 C2CD5Q86YS7 1000 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 TRIML1Q8N9V2 468 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 GAKO14976 1311 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms