RNA–Protein interactions for RNA: ENST00000566749.5

PPP4C-209, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 5

Gene PPP4C, Length 1,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-209ENST00000566749 TRIM17Q9Y577 477 aa29.41■■■□□ 2.3
PPP4C-209ENST00000566749 ROBO3Q96MS0 1386 aa29.4■■■□□ 2.3
PPP4C-209ENST00000566749 PKN2Q16513 984 aaKnown RBP29.4■■■□□ 2.3
PPP4C-209ENST00000566749 IFFO2Q5TF58 517 aa29.4■■■□□ 2.3
PPP4C-209ENST00000566749 ACER1Q8TDN7 264 aa29.4■■■□□ 2.3
PPP4C-209ENST00000566749 DIAPH3Q9NSV4 1193 aa29.4■■■□□ 2.3
PPP4C-209ENST00000566749 HIP1O00291 1037 aa29.39■■■□□ 2.3
PPP4C-209ENST00000566749 NEFLP07196 543 aa29.39■■■□□ 2.3
PPP4C-209ENST00000566749 OSBPP22059 807 aa29.39■■■□□ 2.3
PPP4C-209ENST00000566749 USP14P54578 494 aa29.39■■■□□ 2.3
PPP4C-209ENST00000566749 VPS53Q5VIR6 699 aa29.39■■■□□ 2.3
PPP4C-209ENST00000566749 CENPQQ7L2Z9 268 aaPredicted RBP29.39■■■□□ 2.3
PPP4C-209ENST00000566749 FOXP2O15409 715 aa29.38■■■□□ 2.29
PPP4C-209ENST00000566749 KIF22Q14807 665 aa29.38■■■□□ 2.29
PPP4C-209ENST00000566749 KIAA1683Q9H0B3 1180 aa29.38■■■□□ 2.29
PPP4C-209ENST00000566749 EFCC1Q9HA90 598 aa29.38■■■□□ 2.29
PPP4C-209ENST00000566749 ZNF287Q9HBT7 754 aa29.38■■■□□ 2.29
PPP4C-209ENST00000566749 EMILIN3Q9NT22 766 aa29.38■■■□□ 2.29
PPP4C-209ENST00000566749 GSPT1P15170 499 aaKnown RBP29.37■■■□□ 2.29
PPP4C-209ENST00000566749 LACTBP83111 547 aaPredicted RBP29.37■■■□□ 2.29
PPP4C-209ENST00000566749 ARHGEF6Q15052 776 aa29.37■■■□□ 2.29
PPP4C-209ENST00000566749 OTOP1Q7RTM1 612 aa29.37■■■□□ 2.29
PPP4C-209ENST00000566749 ZNF589Q86UQ0 364 aaPredicted RBP29.37■■■□□ 2.29
PPP4C-209ENST00000566749 CCDC171Q6TFL3 1326 aa29.37■■■□□ 2.29
PPP4C-209ENST00000566749 SLC3A2P08195 630 aaKnown RBP29.36■■■□□ 2.29
PPP4C-209ENST00000566749 MFAP1P55081 439 aaKnown RBP29.36■■■□□ 2.29
PPP4C-209ENST00000566749 PPARAQ07869 468 aa29.36■■■□□ 2.29
PPP4C-209ENST00000566749 CWC27Q6UX04 472 aaKnown RBP29.36■■■□□ 2.29
PPP4C-209ENST00000566749 ASCC2Q9H1I8 757 aaPredicted RBP29.36■■■□□ 2.29
PPP4C-209ENST00000566749 CAPN15O75808 1086 aa29.36■■■□□ 2.29
PPP4C-209ENST00000566749 CENPBP07199 599 aaPredicted RBP29.36■■■□□ 2.29
PPP4C-209ENST00000566749 BCRP11274 1271 aa29.36■■■□□ 2.29
PPP4C-209ENST00000566749 IRX3P78415 501 aaPredicted RBP29.36■■■□□ 2.29
PPP4C-209ENST00000566749 ICA1Q05084 483 aa29.36■■■□□ 2.29
PPP4C-209ENST00000566749 C12orf42Q96LP6 360 aa29.36■■■□□ 2.29
PPP4C-209ENST00000566749 ECM2O94769 699 aaPredicted RBP29.35■■■□□ 2.29
PPP4C-209ENST00000566749 RASA1P20936 1047 aa29.35■■■□□ 2.29
PPP4C-209ENST00000566749 HOXA7P31268 230 aaPredicted RBP29.35■■■□□ 2.29
PPP4C-209ENST00000566749 CAP1Q01518 475 aa29.35■■■□□ 2.29
PPP4C-209ENST00000566749 CLEC10AQ8IUN9 316 aa29.35■■■□□ 2.29
PPP4C-209ENST00000566749 ZNF444Q8N0Y2 327 aaPredicted RBP29.35■■■□□ 2.29
PPP4C-209ENST00000566749 ARHGEF10LQ9HCE6 1279 aa29.35■■■□□ 2.29
PPP4C-209ENST00000566749 A0A1W2PRG0 241 aa29.34■■■□□ 2.29
PPP4C-209ENST00000566749 PRDM1O75626 825 aa29.34■■■□□ 2.29
PPP4C-209ENST00000566749 HSPD1P10809 573 aaKnown RBP29.34■■■□□ 2.29
PPP4C-209ENST00000566749 PDE4BQ07343 736 aa29.34■■■□□ 2.29
PPP4C-209ENST00000566749 FBXO46Q6PJ61 603 aaPredicted RBP29.34■■■□□ 2.29
PPP4C-209ENST00000566749 ARHGAP39Q9C0H5 1083 aa29.34■■■□□ 2.29
PPP4C-209ENST00000566749 ALX1Q15699 326 aa29.33■■■□□ 2.29
PPP4C-209ENST00000566749 CCDC136Q96JN2 1154 aa29.33■■■□□ 2.29
PPP4C-209ENST00000566749 KANSL2Q9H9L4 492 aa29.33■■■□□ 2.29
PPP4C-209ENST00000566749 ANKRD13CQ8N6S4 541 aa29.32■■■□□ 2.28
PPP4C-209ENST00000566749 SH2D4AQ9H788 454 aa29.32■■■□□ 2.28
PPP4C-209ENST00000566749 FGAP02671 866 aa29.31■■■□□ 2.28
PPP4C-209ENST00000566749 VCAM1P19320 739 aa29.31■■■□□ 2.28
PPP4C-209ENST00000566749 GCLCP48506 637 aaPredicted RBP29.31■■■□□ 2.28
PPP4C-209ENST00000566749 ATP2B2Q01814 1243 aa29.31■■■□□ 2.28
PPP4C-209ENST00000566749 SIAH1Q8IUQ4 282 aa29.31■■■□□ 2.28
PPP4C-209ENST00000566749 ZSWIM8A7E2V4 1837 aa29.31■■■□□ 2.28
PPP4C-209ENST00000566749 PSMC4P43686 418 aa29.3■■■□□ 2.28
PPP4C-209ENST00000566749 P2RX7Q99572 595 aaKnown RBP29.3■■■□□ 2.28
PPP4C-209ENST00000566749 USP17L15C9J2P7 530 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 USP17L13C9JLJ4 530 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 USP17L11C9JVI0 530 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 USP17L18D6R9N7 530 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 USP17L22D6RA61 530 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 USP17L17D6RBQ6 530 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 USP17L19D6RCP7 530 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 USP17L20D6RJB6 530 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 EEF2P13639 858 aaKnown RBP29.29■■■□□ 2.28
PPP4C-209ENST00000566749 CTDSPL2Q05D32 466 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 USP17L24Q0WX57 530 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.29■■■□□ 2.28
PPP4C-209ENST00000566749 HPS5Q9UPZ3 1129 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 PTPN22Q9Y2R2 807 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 TMX2Q9Y320 296 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 CCDC85CA6NKD9 419 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 FMNL1O95466 1100 aaPredicted RBP29.29■■■□□ 2.28
PPP4C-209ENST00000566749 FAM110CQ1W6H9 321 aa29.29■■■□□ 2.28
PPP4C-209ENST00000566749 GREB1LQ9C091 1923 aaPredicted RBP29.28■■■□□ 2.28
PPP4C-209ENST00000566749 GNRH1P01148 92 aa29.28■■■□□ 2.28
PPP4C-209ENST00000566749 CTGFP29279 349 aa29.28■■■□□ 2.28
PPP4C-209ENST00000566749 HERVK_113P62684 666 aa29.28■■■□□ 2.28
PPP4C-209ENST00000566749 RPAP3Q9H6T3 665 aaPredicted RBP29.28■■■□□ 2.28
PPP4C-209ENST00000566749 ANAPC4Q9UJX5 808 aa29.28■■■□□ 2.28
PPP4C-209ENST00000566749 ZMYM6O95789 1325 aa29.27■■■□□ 2.28
PPP4C-209ENST00000566749 FCGRTP55899 365 aa29.27■■■□□ 2.28
PPP4C-209ENST00000566749 CATSPERGQ6ZRH7 1159 aa29.27■■■□□ 2.28
PPP4C-209ENST00000566749 TRIM47Q96LD4 638 aa29.27■■■□□ 2.28
PPP4C-209ENST00000566749 TSPY3P0CV98 308 aa29.26■■■□□ 2.27
PPP4C-209ENST00000566749 TSPY8P0CW00 308 aa29.26■■■□□ 2.27
PPP4C-209ENST00000566749 LPAR1Q92633 364 aa29.26■■■□□ 2.27
PPP4C-209ENST00000566749 VCPKMTQ9H867 229 aa29.26■■■□□ 2.27
PPP4C-209ENST00000566749 FAM47AQ5JRC9 791 aa29.25■■■□□ 2.27
PPP4C-209ENST00000566749 MGAMO43451 1857 aa29.25■■■□□ 2.27
PPP4C-209ENST00000566749 HOXD10P28358 340 aa29.24■■■□□ 2.27
PPP4C-209ENST00000566749 TFAP4Q01664 338 aa29.24■■■□□ 2.27
PPP4C-209ENST00000566749 SPICE1Q8N0Z3 855 aa29.24■■■□□ 2.27
PPP4C-209ENST00000566749 GTF3C2Q8WUA4 911 aaPredicted RBP29.24■■■□□ 2.27
PPP4C-209ENST00000566749 INCENPQ9NQS7 918 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms