RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 KIF2CQ99661 725 aa18■□□□□ 0.47
KNOP1-203ENST00000565844 TM6SF1Q9BZW5 370 aa18■□□□□ 0.47
KNOP1-203ENST00000565844 ZSWIM5Q9P217 1185 aa18■□□□□ 0.47
KNOP1-203ENST00000565844 USP2O75604 605 aaPredicted RBP17.99■□□□□ 0.47
KNOP1-203ENST00000565844 CPA1P15085 419 aa17.99■□□□□ 0.47
KNOP1-203ENST00000565844 INPP5BP32019 993 aa17.99■□□□□ 0.47
KNOP1-203ENST00000565844 MCM5P33992 734 aa17.99■□□□□ 0.47
KNOP1-203ENST00000565844 CAP2P40123 477 aa17.99■□□□□ 0.47
KNOP1-203ENST00000565844 IREB2P48200 963 aaKnown RBP17.99■□□□□ 0.47
KNOP1-203ENST00000565844 SHROOM1Q2M3G4 852 aaPredicted RBP17.99■□□□□ 0.47
KNOP1-203ENST00000565844 SPRYD7Q5W111 196 aa17.99■□□□□ 0.47
KNOP1-203ENST00000565844 CYB5R4Q7L1T6 521 aa17.99■□□□□ 0.47
KNOP1-203ENST00000565844 CHST3Q7LGC8 479 aa17.99■□□□□ 0.47
KNOP1-203ENST00000565844 UPF3BQ9BZI7 483 aaKnown RBP17.99■□□□□ 0.47
KNOP1-203ENST00000565844 ZNF112Q9UJU3 913 aa17.99■□□□□ 0.47
KNOP1-203ENST00000565844 PLIN4Q96Q06 1357 aa17.99■□□□□ 0.47
KNOP1-203ENST00000565844 MYH4Q9Y623 1939 aa17.98■□□□□ 0.47
KNOP1-203ENST00000565844 PRC1O43663 620 aa17.98■□□□□ 0.47
KNOP1-203ENST00000565844 CTNND1O60716 968 aaKnown RBP17.98■□□□□ 0.47
KNOP1-203ENST00000565844 GH2P01242 217 aa17.98■□□□□ 0.47
KNOP1-203ENST00000565844 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.98■□□□□ 0.47
KNOP1-203ENST00000565844 SLC10A4Q96EP9 437 aa17.98■□□□□ 0.47
KNOP1-203ENST00000565844 ZKSCAN3Q9BRR0 538 aa17.98■□□□□ 0.47
KNOP1-203ENST00000565844 ZSWIM6Q9HCJ5 1215 aa17.98■□□□□ 0.47
KNOP1-203ENST00000565844 CABP5Q9NP86 173 aa17.98■□□□□ 0.47
KNOP1-203ENST00000565844 CYP46A1Q9Y6A2 500 aa17.98■□□□□ 0.47
KNOP1-203ENST00000565844 RPS6KB1P23443 525 aa17.97■□□□□ 0.47
KNOP1-203ENST00000565844 ANTXR2P58335 489 aa17.97■□□□□ 0.47
KNOP1-203ENST00000565844 JAG1P78504 1218 aa17.97■□□□□ 0.47
KNOP1-203ENST00000565844 TMEM179Q6ZVK1 233 aa17.97■□□□□ 0.47
KNOP1-203ENST00000565844 RUFY3Q7L099 469 aa17.97■□□□□ 0.47
KNOP1-203ENST00000565844 DHX32Q7L7V1 743 aaKnown RBP17.97■□□□□ 0.47
KNOP1-203ENST00000565844 IQCA1Q86XH1 822 aa17.97■□□□□ 0.47
KNOP1-203ENST00000565844 NEDD1Q8NHV4 660 aa17.97■□□□□ 0.47
KNOP1-203ENST00000565844 ZKSCAN4Q969J2 545 aaPredicted RBP17.97■□□□□ 0.47
KNOP1-203ENST00000565844 TCEANC2Q96MN5 208 aa17.97■□□□□ 0.47
KNOP1-203ENST00000565844 UBAC1Q9BSL1 405 aa17.97■□□□□ 0.47
KNOP1-203ENST00000565844 R3HDMLQ9H3Y0 253 aa17.97■□□□□ 0.47
KNOP1-203ENST00000565844 ZBTB21Q9ULJ3 1066 aa17.97■□□□□ 0.47
KNOP1-203ENST00000565844 PHIPQ8WWQ0 1821 aa17.96■□□□□ 0.47
KNOP1-203ENST00000565844 WDR19Q8NEZ3 1342 aa17.96■□□□□ 0.47
KNOP1-203ENST00000565844 NMT2O60551 498 aa17.96■□□□□ 0.47
KNOP1-203ENST00000565844 ASNSP08243 561 aa17.96■□□□□ 0.47
KNOP1-203ENST00000565844 VGLL4Q14135 290 aa17.96■□□□□ 0.47
KNOP1-203ENST00000565844 RAB3GAP1Q15042 981 aa17.96■□□□□ 0.47
KNOP1-203ENST00000565844 RABEP1Q15276 862 aa17.96■□□□□ 0.47
KNOP1-203ENST00000565844 MAP3K11Q16584 847 aa17.96■□□□□ 0.47
KNOP1-203ENST00000565844 REM2Q8IYK8 340 aaPredicted RBP17.96■□□□□ 0.47
KNOP1-203ENST00000565844 SCYL3Q8IZE3 742 aa17.96■□□□□ 0.47
KNOP1-203ENST00000565844 WNK4Q96J92 1243 aa17.96■□□□□ 0.47
KNOP1-203ENST00000565844 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.96■□□□□ 0.47
KNOP1-203ENST00000565844 GJA5P36382 358 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 TM4SF4P48230 202 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 MAP3K9P80192 1104 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 EXOSC10Q01780 885 aaKnown RBP17.95■□□□□ 0.46
KNOP1-203ENST00000565844 SEPT2Q15019 361 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 SART3Q15020 963 aaKnown RBP17.95■□□□□ 0.46
KNOP1-203ENST00000565844 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.95■□□□□ 0.46
KNOP1-203ENST00000565844 CLEC10AQ8IUN9 316 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 ANKRD13AQ8IZ07 590 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 CEP95Q96GE4 821 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 ZSCAN10Q96SZ4 725 aaPredicted RBP17.95■□□□□ 0.46
KNOP1-203ENST00000565844 LRRC2Q9BYS8 371 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 ELP3Q9H9T3 547 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 PICK1Q9NRD5 415 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 IL17RBQ9NRM6 502 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.95■□□□□ 0.46
KNOP1-203ENST00000565844 CSADQ9Y600 493 aa17.95■□□□□ 0.46
KNOP1-203ENST00000565844 TNKSO95271 1327 aa17.94■□□□□ 0.46
KNOP1-203ENST00000565844 ERICH2A1L162 156 aa17.94■□□□□ 0.46
KNOP1-203ENST00000565844 IFIT3O14879 490 aaKnown RBP17.94■□□□□ 0.46
KNOP1-203ENST00000565844 GUCY1A2P33402 732 aa17.94■□□□□ 0.46
KNOP1-203ENST00000565844 NEK4P51957 841 aa17.94■□□□□ 0.46
KNOP1-203ENST00000565844 FGD1P98174 961 aa17.94■□□□□ 0.46
KNOP1-203ENST00000565844 SREBF2Q12772 1141 aa17.94■□□□□ 0.46
KNOP1-203ENST00000565844 TMEM67Q5HYA8 995 aa17.94■□□□□ 0.46
KNOP1-203ENST00000565844 NOL9Q5SY16 702 aaKnown RBP17.94■□□□□ 0.46
KNOP1-203ENST00000565844 ZNF296Q8WUU4 475 aaPredicted RBP17.94■□□□□ 0.46
KNOP1-203ENST00000565844 CNKSR2Q8WXI2 1034 aa17.94■□□□□ 0.46
KNOP1-203ENST00000565844 GINM1Q9NU53 330 aa17.94■□□□□ 0.46
KNOP1-203ENST00000565844 PDRG1Q9NUG6 133 aa17.94■□□□□ 0.46
KNOP1-203ENST00000565844 TCP11L1Q9NUJ3 509 aa17.94■□□□□ 0.46
KNOP1-203ENST00000565844 IGKV6D-41A0A0C4DH26 115 aa17.93■□□□□ 0.46
KNOP1-203ENST00000565844 ICA1Q05084 483 aa17.93■□□□□ 0.46
KNOP1-203ENST00000565844 CCDC178Q5BJE1 867 aa17.93■□□□□ 0.46
KNOP1-203ENST00000565844 ENAHQ8N8S7 591 aaPredicted RBP17.93■□□□□ 0.46
KNOP1-203ENST00000565844 TMEM87BQ96K49 555 aa17.93■□□□□ 0.46
KNOP1-203ENST00000565844 KANSL2Q9H9L4 492 aa17.93■□□□□ 0.46
KNOP1-203ENST00000565844 MTMR4Q9NYA4 1195 aa17.93■□□□□ 0.46
KNOP1-203ENST00000565844 STX8Q9UNK0 236 aa17.93■□□□□ 0.46
KNOP1-203ENST00000565844 SNCAIPQ9Y6H5 919 aa17.93■□□□□ 0.46
KNOP1-203ENST00000565844 ATP2B2Q01814 1243 aa17.92■□□□□ 0.46
KNOP1-203ENST00000565844 PPP4R3BQ5MIZ7 849 aa17.92■□□□□ 0.46
KNOP1-203ENST00000565844 Q6ZUG5 572 aa17.92■□□□□ 0.46
KNOP1-203ENST00000565844 CCDC84Q86UT8 332 aaPredicted RBP17.92■□□□□ 0.46
KNOP1-203ENST00000565844 MTA3Q9BTC8 594 aa17.92■□□□□ 0.46
KNOP1-203ENST00000565844 GPHNQ9NQX3 736 aaPredicted RBP17.92■□□□□ 0.46
KNOP1-203ENST00000565844 GPR25O00155 361 aa17.91■□□□□ 0.46
KNOP1-203ENST00000565844 IGF2BP3O00425 579 aaKnown RBP eCLIP17.91■□□□□ 0.46
KNOP1-203ENST00000565844 SH2B2O14492 632 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms