RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 PABPC4Q13310 644 aaKnown RBP eCLIP24.21■■□□□ 1.47
CMTM3-206ENST00000563672 ALX1Q15699 326 aa24.21■■□□□ 1.47
CMTM3-206ENST00000563672 PKN2Q16513 984 aaKnown RBP24.21■■□□□ 1.47
CMTM3-206ENST00000563672 ZNF589Q86UQ0 364 aaPredicted RBP24.21■■□□□ 1.47
CMTM3-206ENST00000563672 C12orf42Q96LP6 360 aa24.21■■□□□ 1.47
CMTM3-206ENST00000563672 HIP1O00291 1037 aa24.2■■□□□ 1.46
CMTM3-206ENST00000563672 BCRP11274 1271 aa24.2■■□□□ 1.46
CMTM3-206ENST00000563672 SIAH1Q8IUQ4 282 aa24.2■■□□□ 1.46
CMTM3-206ENST00000563672 ABHD8Q96I13 439 aa24.2■■□□□ 1.46
CMTM3-206ENST00000563672 PNMA3Q9UL41 463 aa24.2■■□□□ 1.46
CMTM3-206ENST00000563672 LOC285556D6RIA3 1793 aa24.2■■□□□ 1.46
CMTM3-206ENST00000563672 CCDC171Q6TFL3 1326 aa24.19■■□□□ 1.46
CMTM3-206ENST00000563672 A0A1W2PRG0 241 aa24.19■■□□□ 1.46
CMTM3-206ENST00000563672 RASA1P20936 1047 aa24.19■■□□□ 1.46
CMTM3-206ENST00000563672 USP14P54578 494 aa24.19■■□□□ 1.46
CMTM3-206ENST00000563672 PPARAQ07869 468 aa24.19■■□□□ 1.46
CMTM3-206ENST00000563672 IFFO2Q5TF58 517 aa24.19■■□□□ 1.46
CMTM3-206ENST00000563672 OTOP1Q7RTM1 612 aa24.19■■□□□ 1.46
CMTM3-206ENST00000563672 STK11IPQ8N1F8 1099 aa24.19■■□□□ 1.46
CMTM3-206ENST00000563672 FEZ1Q99689 392 aa24.19■■□□□ 1.46
CMTM3-206ENST00000563672 ASCC2Q9H1I8 757 aaPredicted RBP24.19■■□□□ 1.46
CMTM3-206ENST00000563672 MKNK2Q9HBH9 465 aa24.19■■□□□ 1.46
CMTM3-206ENST00000563672 DIAPH3Q9NSV4 1193 aa24.19■■□□□ 1.46
CMTM3-206ENST00000563672 HSPD1P10809 573 aaKnown RBP24.18■■□□□ 1.46
CMTM3-206ENST00000563672 OSBPP22059 807 aa24.18■■□□□ 1.46
CMTM3-206ENST00000563672 LACTBP83111 547 aaPredicted RBP24.18■■□□□ 1.46
CMTM3-206ENST00000563672 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.18■■□□□ 1.46
CMTM3-206ENST00000563672 ZNF287Q9HBT7 754 aa24.18■■□□□ 1.46
CMTM3-206ENST00000563672 ZYXQ15942 572 aaKnown RBP24.17■■□□□ 1.46
CMTM3-206ENST00000563672 CWC27Q6UX04 472 aaKnown RBP24.17■■□□□ 1.46
CMTM3-206ENST00000563672 SMCR8Q8TEV9 937 aaPredicted RBP24.17■■□□□ 1.46
CMTM3-206ENST00000563672 EFCC1Q9HA90 598 aa24.17■■□□□ 1.46
CMTM3-206ENST00000563672 TRIM17Q9Y577 477 aa24.17■■□□□ 1.46
CMTM3-206ENST00000563672 FGAP02671 866 aa24.16■■□□□ 1.46
CMTM3-206ENST00000563672 MFAP1P55081 439 aaKnown RBP24.16■■□□□ 1.46
CMTM3-206ENST00000563672 ICA1Q05084 483 aa24.16■■□□□ 1.46
CMTM3-206ENST00000563672 CLEC10AQ8IUN9 316 aa24.16■■□□□ 1.46
CMTM3-206ENST00000563672 KANSL2Q9H9L4 492 aa24.16■■□□□ 1.46
CMTM3-206ENST00000563672 ANAPC4Q9UJX5 808 aa24.16■■□□□ 1.46
CMTM3-206ENST00000563672 TMX2Q9Y320 296 aa24.16■■□□□ 1.46
CMTM3-206ENST00000563672 ZMYM6O95789 1325 aa24.15■■□□□ 1.46
CMTM3-206ENST00000563672 PRDM1O75626 825 aa24.15■■□□□ 1.46
CMTM3-206ENST00000563672 SLC3A2P08195 630 aaKnown RBP24.15■■□□□ 1.46
CMTM3-206ENST00000563672 ARHGEF6Q15052 776 aa24.15■■□□□ 1.46
CMTM3-206ENST00000563672 FBXO46Q6PJ61 603 aaPredicted RBP24.15■■□□□ 1.46
CMTM3-206ENST00000563672 P2RX7Q99572 595 aaKnown RBP24.15■■□□□ 1.46
CMTM3-206ENST00000563672 ARHGAP39Q9C0H5 1083 aa24.15■■□□□ 1.46
CMTM3-206ENST00000563672 ARHGEF10LQ9HCE6 1279 aa24.15■■□□□ 1.46
CMTM3-206ENST00000563672 NEFLP07196 543 aa24.14■■□□□ 1.45
CMTM3-206ENST00000563672 CENPBP07199 599 aaPredicted RBP24.14■■□□□ 1.45
CMTM3-206ENST00000563672 VCAM1P19320 739 aa24.14■■□□□ 1.45
CMTM3-206ENST00000563672 CTGFP29279 349 aa24.14■■□□□ 1.45
CMTM3-206ENST00000563672 GCLCP48506 637 aaPredicted RBP24.14■■□□□ 1.45
CMTM3-206ENST00000563672 IRX3P78415 501 aaPredicted RBP24.14■■□□□ 1.45
CMTM3-206ENST00000563672 PDE4BQ07343 736 aa24.14■■□□□ 1.45
CMTM3-206ENST00000563672 KIF22Q14807 665 aa24.14■■□□□ 1.45
CMTM3-206ENST00000563672 ZNF444Q8N0Y2 327 aaPredicted RBP24.14■■□□□ 1.45
CMTM3-206ENST00000563672 USP17L15C9J2P7 530 aa24.13■■□□□ 1.45
CMTM3-206ENST00000563672 USP17L13C9JLJ4 530 aa24.13■■□□□ 1.45
CMTM3-206ENST00000563672 USP17L11C9JVI0 530 aa24.13■■□□□ 1.45
CMTM3-206ENST00000563672 USP17L18D6R9N7 530 aa24.13■■□□□ 1.45
CMTM3-206ENST00000563672 USP17L22D6RA61 530 aa24.13■■□□□ 1.45
CMTM3-206ENST00000563672 USP17L17D6RBQ6 530 aa24.13■■□□□ 1.45
CMTM3-206ENST00000563672 USP17L19D6RCP7 530 aa24.13■■□□□ 1.45
CMTM3-206ENST00000563672 USP17L20D6RJB6 530 aa24.13■■□□□ 1.45
CMTM3-206ENST00000563672 EEF2P13639 858 aaKnown RBP24.13■■□□□ 1.45
CMTM3-206ENST00000563672 USP17L24Q0WX57 530 aa24.13■■□□□ 1.45
CMTM3-206ENST00000563672 CCDC136Q96JN2 1154 aa24.13■■□□□ 1.45
CMTM3-206ENST00000563672 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.13■■□□□ 1.45
CMTM3-206ENST00000563672 IGKV6D-41A0A0C4DH26 115 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 GNRH1P01148 92 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 FGRP09769 529 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 HERVK_113P62684 666 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 CTDSPL2Q05D32 466 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 FAM110CQ1W6H9 321 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 CATSPERGQ6ZRH7 1159 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 ANKRD13CQ8N6S4 541 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 TRIM47Q96LD4 638 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 SH2D4AQ9H788 454 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 HPS5Q9UPZ3 1129 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 PTPN22Q9Y2R2 807 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 TACC3Q9Y6A5 838 aa24.12■■□□□ 1.45
CMTM3-206ENST00000563672 CHMLP26374 656 aa24.11■■□□□ 1.45
CMTM3-206ENST00000563672 PSMC4P43686 418 aa24.11■■□□□ 1.45
CMTM3-206ENST00000563672 KIAA1755Q5JYT7 1200 aa24.11■■□□□ 1.45
CMTM3-206ENST00000563672 VCPKMTQ9H867 229 aa24.11■■□□□ 1.45
CMTM3-206ENST00000563672 NYAP2Q9P242 653 aa24.11■■□□□ 1.45
CMTM3-206ENST00000563672 MORF4L1Q9UBU8 362 aa24.11■■□□□ 1.45
CMTM3-206ENST00000563672 MYH8P13535 1937 aa24.11■■□□□ 1.45
CMTM3-206ENST00000563672 NEDD1Q8NHV4 660 aa24.1■■□□□ 1.45
CMTM3-206ENST00000563672 LPAR1Q92633 364 aa24.1■■□□□ 1.45
CMTM3-206ENST00000563672 IL25Q9H293 177 aa24.1■■□□□ 1.45
CMTM3-206ENST00000563672 RPAP3Q9H6T3 665 aaPredicted RBP24.1■■□□□ 1.45
CMTM3-206ENST00000563672 INCENPQ9NQS7 918 aa24.1■■□□□ 1.45
CMTM3-206ENST00000563672 ATP2B2Q01814 1243 aa24.09■■□□□ 1.45
CMTM3-206ENST00000563672 POTEEQ6S8J3 1075 aa24.09■■□□□ 1.45
CMTM3-206ENST00000563672 SKAP1Q86WV1 359 aa24.09■■□□□ 1.45
CMTM3-206ENST00000563672 DSCC1Q9BVC3 393 aa24.09■■□□□ 1.45
CMTM3-206ENST00000563672 RBPJLQ9UBG7 517 aa24.09■■□□□ 1.45
CMTM3-206ENST00000563672 GREB1LQ9C091 1923 aaPredicted RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms