RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SNX11Q9Y5W9 270 aa7.94□□□□□ -1.14
LINC00254-201ENST00000563416 WIZO95785 1651 aa7.94□□□□□ -1.14
LINC00254-201ENST00000563416 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 UPK3BL1B0FP48 263 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 UPK3BL2E5RIL1 263 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 KIR3DL1P43629 444 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 CHMP4BP1P59074 171 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 RACK1P63244 317 aaKnown RBP7.93□□□□□ -1.14
LINC00254-201ENST00000563416 GK5Q6ZS86 529 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 CDH24Q86UP0 819 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 PHACTR4Q8IZ21 702 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 MFSD4AQ8N468 514 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 RIN3Q8TB24 985 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 SPATA32Q96LK8 384 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 CCDC74BQ96LY2 380 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 EHMT1Q9H9B1 1298 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 GMIPQ9P107 970 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 VAV3Q9UKW4 847 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 CEP131Q9UPN4 1083 aa7.93□□□□□ -1.14
LINC00254-201ENST00000563416 FAM155AB1AL88 458 aaPredicted RBP7.92□□□□□ -1.14
LINC00254-201ENST00000563416 CHURC1-FNTBB4DL54 471 aa7.92□□□□□ -1.14
LINC00254-201ENST00000563416 ZNF865P0CJ78 1059 aaPredicted RBP7.92□□□□□ -1.14
LINC00254-201ENST00000563416 TNNI2P48788 182 aa7.92□□□□□ -1.14
LINC00254-201ENST00000563416 CLCN7P51798 805 aa7.92□□□□□ -1.14
LINC00254-201ENST00000563416 GP2P55259 537 aaKnown RBP7.92□□□□□ -1.14
LINC00254-201ENST00000563416 PRKCQQ04759 706 aa7.92□□□□□ -1.14
LINC00254-201ENST00000563416 LRRFIP1Q32MZ4 808 aaKnown RBP7.92□□□□□ -1.14
LINC00254-201ENST00000563416 AGBL5Q8NDL9 886 aa7.92□□□□□ -1.14
LINC00254-201ENST00000563416 FLCNQ8NFG4 579 aa7.92□□□□□ -1.14
LINC00254-201ENST00000563416 TNKS2Q9H2K2 1166 aa7.92□□□□□ -1.14
LINC00254-201ENST00000563416 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.92□□□□□ -1.14
LINC00254-201ENST00000563416 IMPDH2P12268 514 aa7.91□□□□□ -1.14
LINC00254-201ENST00000563416 RAG1P15918 1043 aa7.91□□□□□ -1.14
LINC00254-201ENST00000563416 C9orf131Q5VYM1 1079 aa7.91□□□□□ -1.14
LINC00254-201ENST00000563416 TP53INP2Q8IXH6 220 aa7.91□□□□□ -1.14
LINC00254-201ENST00000563416 BCL7CQ8WUZ0 217 aaPredicted RBP7.91□□□□□ -1.14
LINC00254-201ENST00000563416 TGIF2Q9GZN2 237 aa7.91□□□□□ -1.14
LINC00254-201ENST00000563416 PLAGL2Q9UPG8 496 aa7.91□□□□□ -1.14
LINC00254-201ENST00000563416 U3KQE9 123 aa7.91□□□□□ -1.14
LINC00254-201ENST00000563416 BAZ1BQ9UIG0 1483 aaKnown RBP7.91□□□□□ -1.14
LINC00254-201ENST00000563416 SLC22A31A6NKX4 558 aa7.9□□□□□ -1.14
LINC00254-201ENST00000563416 CBX7O95931 251 aa7.9□□□□□ -1.14
LINC00254-201ENST00000563416 GBP1P32455 592 aa7.9□□□□□ -1.14
LINC00254-201ENST00000563416 CLCQ05315 142 aa7.9□□□□□ -1.14
LINC00254-201ENST00000563416 PAK2Q13177 524 aa7.9□□□□□ -1.14
LINC00254-201ENST00000563416 COL9A2Q14055 689 aaPredicted RBP7.9□□□□□ -1.14
LINC00254-201ENST00000563416 AOC3Q16853 763 aa7.9□□□□□ -1.14
LINC00254-201ENST00000563416 SPACA3Q8IXA5 215 aa7.9□□□□□ -1.14
LINC00254-201ENST00000563416 DNAJB8Q8NHS0 232 aa7.9□□□□□ -1.14
LINC00254-201ENST00000563416 ASB11Q8WXH4 323 aa7.9□□□□□ -1.14
LINC00254-201ENST00000563416 ZNF428Q96B54 188 aa7.9□□□□□ -1.14
LINC00254-201ENST00000563416 CCSER2Q9H7U1 834 aa7.9□□□□□ -1.14
LINC00254-201ENST00000563416 TCF3P15923 654 aa7.89□□□□□ -1.15
LINC00254-201ENST00000563416 NKPD1Q17RQ9 610 aa7.89□□□□□ -1.15
LINC00254-201ENST00000563416 ARSHQ5FYA8 562 aa7.89□□□□□ -1.15
LINC00254-201ENST00000563416 OVOS1Q6IE37 1185 aa7.89□□□□□ -1.15
LINC00254-201ENST00000563416 FERD3LQ96RJ6 166 aa7.89□□□□□ -1.15
LINC00254-201ENST00000563416 RGS13O14921 159 aa7.88□□□□□ -1.15
LINC00254-201ENST00000563416 DNAJA2O60884 412 aa7.88□□□□□ -1.15
LINC00254-201ENST00000563416 ADAMTS4O75173 837 aa7.88□□□□□ -1.15
LINC00254-201ENST00000563416 XP32Q5T750 250 aa7.88□□□□□ -1.15
LINC00254-201ENST00000563416 CDCP2Q5VXM1 449 aa7.88□□□□□ -1.15
LINC00254-201ENST00000563416 PIWIL2Q8TC59 973 aaKnown RBP7.88□□□□□ -1.15
LINC00254-201ENST00000563416 PPP1R13LQ8WUF5 828 aa7.88□□□□□ -1.15
LINC00254-201ENST00000563416 RNF141Q8WVD5 230 aa7.88□□□□□ -1.15
LINC00254-201ENST00000563416 TMEM40Q8WWA1 233 aa7.88□□□□□ -1.15
LINC00254-201ENST00000563416 GPRASP2Q96D09 838 aa7.88□□□□□ -1.15
LINC00254-201ENST00000563416 KCNH3Q9ULD8 1083 aa7.88□□□□□ -1.15
LINC00254-201ENST00000563416 CAPN6Q9Y6Q1 641 aa7.88□□□□□ -1.15
LINC00254-201ENST00000563416 MEIS3P2A8K0S8 358 aa7.87□□□□□ -1.15
LINC00254-201ENST00000563416 PRR33A8MZF0 331 aa7.87□□□□□ -1.15
LINC00254-201ENST00000563416 E9PSI1 815 aa7.87□□□□□ -1.15
LINC00254-201ENST00000563416 BNIP3Q12983 259 aa7.87□□□□□ -1.15
LINC00254-201ENST00000563416 ANGEL2Q5VTE6 544 aaKnown RBP7.87□□□□□ -1.15
LINC00254-201ENST00000563416 NLRC3Q7RTR2 1065 aa7.87□□□□□ -1.15
LINC00254-201ENST00000563416 BAHD1Q8TBE0 780 aaPredicted RBP7.87□□□□□ -1.15
LINC00254-201ENST00000563416 RASGRP4Q8TDF6 673 aa7.87□□□□□ -1.15
LINC00254-201ENST00000563416 KIF2CQ99661 725 aa7.87□□□□□ -1.15
LINC00254-201ENST00000563416 ASPNQ9BXN1 380 aa7.87□□□□□ -1.15
LINC00254-201ENST00000563416 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.87□□□□□ -1.15
LINC00254-201ENST00000563416 CNNM2Q9H8M5 875 aa7.87□□□□□ -1.15
LINC00254-201ENST00000563416 ZNRF3Q9ULT6 936 aa7.87□□□□□ -1.15
LINC00254-201ENST00000563416 CNTNAP4Q9C0A0 1308 aa7.86□□□□□ -1.15
LINC00254-201ENST00000563416 ERCC5P28715 1186 aaPredicted RBP7.86□□□□□ -1.15
LINC00254-201ENST00000563416 CCNFP41002 786 aa7.86□□□□□ -1.15
LINC00254-201ENST00000563416 RAD51AP2Q09MP3 1159 aa7.86□□□□□ -1.15
LINC00254-201ENST00000563416 CDKAL1Q5VV42 579 aa7.86□□□□□ -1.15
LINC00254-201ENST00000563416 FBXW10Q5XX13 1052 aa7.86□□□□□ -1.15
LINC00254-201ENST00000563416 THAP5Q7Z6K1 395 aa7.86□□□□□ -1.15
LINC00254-201ENST00000563416 ATG4CQ96DT6 458 aa7.86□□□□□ -1.15
LINC00254-201ENST00000563416 PAK6Q9NQU5 681 aaPredicted RBP7.86□□□□□ -1.15
LINC00254-201ENST00000563416 RSF1Q96T23 1441 aaPredicted RBP7.86□□□□□ -1.15
LINC00254-201ENST00000563416 PITPNM2Q9BZ72 1349 aa7.85□□□□□ -1.15
LINC00254-201ENST00000563416 CD8BP10966 210 aa7.85□□□□□ -1.15
LINC00254-201ENST00000563416 GJA8P48165 433 aa7.85□□□□□ -1.15
LINC00254-201ENST00000563416 RNF4P78317 190 aa7.85□□□□□ -1.15
LINC00254-201ENST00000563416 TNK2Q07912 1038 aa7.85□□□□□ -1.15
LINC00254-201ENST00000563416 HSPA12BQ96MM6 686 aa7.85□□□□□ -1.15
LINC00254-201ENST00000563416 KREMEN1Q96MU8 473 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms