RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 SERPINB13Q9UIV8 391 aa18.87■□□□□ 0.61
USB1-208ENST00000563207 PRKAB2O43741 272 aa18.86■□□□□ 0.61
USB1-208ENST00000563207 HOXA7P31268 230 aaPredicted RBP18.86■□□□□ 0.61
USB1-208ENST00000563207 GUCY1A2P33402 732 aa18.86■□□□□ 0.61
USB1-208ENST00000563207 GCLCP48506 637 aaPredicted RBP18.86■□□□□ 0.61
USB1-208ENST00000563207 HERVK_113P62684 666 aa18.86■□□□□ 0.61
USB1-208ENST00000563207 IRF5Q13568 498 aa18.86■□□□□ 0.61
USB1-208ENST00000563207 UBE2Q1Q7Z7E8 422 aa18.86■□□□□ 0.61
USB1-208ENST00000563207 U2AF1L4Q8WU68 220 aaKnown RBP18.86■□□□□ 0.61
USB1-208ENST00000563207 COA7Q96BR5 231 aa18.86■□□□□ 0.61
USB1-208ENST00000563207 ARMT1Q9H993 441 aa18.86■□□□□ 0.61
USB1-208ENST00000563207 RBPJLQ9UBG7 517 aa18.86■□□□□ 0.61
USB1-208ENST00000563207 MYH7P12883 1935 aa18.86■□□□□ 0.61
USB1-208ENST00000563207 C19orf81C9J6K1 198 aa18.85■□□□□ 0.61
USB1-208ENST00000563207 H0YGN5 161 aa18.85■□□□□ 0.61
USB1-208ENST00000563207 UBXN2AP68543 259 aa18.85■□□□□ 0.61
USB1-208ENST00000563207 IRX3P78415 501 aaPredicted RBP18.85■□□□□ 0.61
USB1-208ENST00000563207 PABPC4Q13310 644 aaKnown RBP eCLIP18.85■□□□□ 0.61
USB1-208ENST00000563207 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
USB1-208ENST00000563207 TICAM2Q86XR7 235 aa18.85■□□□□ 0.61
USB1-208ENST00000563207 PLEKHM2Q8IWE5 1019 aa18.85■□□□□ 0.61
USB1-208ENST00000563207 SLC44A5Q8NCS7 719 aa18.85■□□□□ 0.61
USB1-208ENST00000563207 EHD4Q9H223 541 aa18.85■□□□□ 0.61
USB1-208ENST00000563207 MORF4L1Q9UBU8 362 aa18.85■□□□□ 0.61
USB1-208ENST00000563207 BAZ2AQ9UIF9 1905 aaKnown RBP18.84■□□□□ 0.61
USB1-208ENST00000563207 POLR3DP05423 398 aaPredicted RBP18.84■□□□□ 0.61
USB1-208ENST00000563207 ABCB5Q2M3G0 1257 aa18.84■□□□□ 0.61
USB1-208ENST00000563207 LRRFIP1Q32MZ4 808 aaKnown RBP18.84■□□□□ 0.61
USB1-208ENST00000563207 CERKLQ49MI3 558 aaPredicted RBP18.84■□□□□ 0.61
USB1-208ENST00000563207 HABP4Q5JVS0 413 aaKnown RBP18.84■□□□□ 0.61
USB1-208ENST00000563207 ZSCAN25Q6NSZ9 544 aa18.84■□□□□ 0.61
USB1-208ENST00000563207 PXYLP1Q8TE99 480 aa18.84■□□□□ 0.61
USB1-208ENST00000563207 DYNLL2Q96FJ2 89 aa18.84■□□□□ 0.61
USB1-208ENST00000563207 DEFB118Q96PH6 123 aa18.84■□□□□ 0.61
USB1-208ENST00000563207 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.84■□□□□ 0.61
USB1-208ENST00000563207 PORCNQ9H237 461 aa18.84■□□□□ 0.61
USB1-208ENST00000563207 CYP2D7A0A087X1C5 515 aa18.83■□□□□ 0.6
USB1-208ENST00000563207 SGPL1O95470 568 aa18.83■□□□□ 0.6
USB1-208ENST00000563207 GABPAQ06546 454 aa18.83■□□□□ 0.6
USB1-208ENST00000563207 SEPT2Q15019 361 aa18.83■□□□□ 0.6
USB1-208ENST00000563207 TSHZ3Q63HK5 1081 aa18.83■□□□□ 0.6
USB1-208ENST00000563207 USP17L2Q6R6M4 530 aa18.83■□□□□ 0.6
USB1-208ENST00000563207 TTC6Q86TZ1 520 aa18.83■□□□□ 0.6
USB1-208ENST00000563207 CERS3Q8IU89 383 aa18.83■□□□□ 0.6
USB1-208ENST00000563207 PAGR1Q9BTK6 254 aa18.83■□□□□ 0.6
USB1-208ENST00000563207 DCP1AQ9NPI6 582 aaPredicted RBP18.83■□□□□ 0.6
USB1-208ENST00000563207 MCM9Q9NXL9 1143 aa18.83■□□□□ 0.6
USB1-208ENST00000563207 COLQQ9Y215 455 aaPredicted RBP18.83■□□□□ 0.6
USB1-208ENST00000563207 CNMDO75829 334 aa18.82■□□□□ 0.6
USB1-208ENST00000563207 CYP2B6P20813 491 aa18.82■□□□□ 0.6
USB1-208ENST00000563207 ADD2P35612 726 aa18.82■□□□□ 0.6
USB1-208ENST00000563207 CLEC10AQ8IUN9 316 aa18.82■□□□□ 0.6
USB1-208ENST00000563207 KBTBD3Q8NAB2 608 aa18.82■□□□□ 0.6
USB1-208ENST00000563207 CRNKL1Q9BZJ0 848 aaKnown RBP18.82■□□□□ 0.6
USB1-208ENST00000563207 GINM1Q9NU53 330 aa18.82■□□□□ 0.6
USB1-208ENST00000563207 A0A1W2PRG0 241 aa18.81■□□□□ 0.6
USB1-208ENST00000563207 MBD4O95243 580 aa18.81■□□□□ 0.6
USB1-208ENST00000563207 GPRC5AQ8NFJ5 357 aa18.81■□□□□ 0.6
USB1-208ENST00000563207 NKX2-3Q8TAU0 364 aa18.81■□□□□ 0.6
USB1-208ENST00000563207 TRIB2Q92519 343 aa18.81■□□□□ 0.6
USB1-208ENST00000563207 DPF3Q92784 378 aa18.81■□□□□ 0.6
USB1-208ENST00000563207 FEZ1Q99689 392 aa18.81■□□□□ 0.6
USB1-208ENST00000563207 PAK6Q9NQU5 681 aaPredicted RBP18.81■□□□□ 0.6
USB1-208ENST00000563207 FARP2O94887 1054 aaPredicted RBP18.8■□□□□ 0.6
USB1-208ENST00000563207 TFRCP02786 760 aaKnown RBP18.8■□□□□ 0.6
USB1-208ENST00000563207 PDE4AP27815 886 aa18.8■□□□□ 0.6
USB1-208ENST00000563207 KIAA1755Q5JYT7 1200 aa18.8■□□□□ 0.6
USB1-208ENST00000563207 DIS3LQ8TF46 1054 aaKnown RBP18.8■□□□□ 0.6
USB1-208ENST00000563207 EVI5LQ96CN4 794 aa18.8■□□□□ 0.6
USB1-208ENST00000563207 ALPK3Q96L96 1907 aa18.79■□□□□ 0.6
USB1-208ENST00000563207 MPHOSPH10O00566 681 aaKnown RBP18.79■□□□□ 0.6
USB1-208ENST00000563207 ZFYP08048 801 aaPredicted RBP18.79■□□□□ 0.6
USB1-208ENST00000563207 VCAM1P19320 739 aa18.79■□□□□ 0.6
USB1-208ENST00000563207 ERVK-9P63128 1117 aa18.79■□□□□ 0.6
USB1-208ENST00000563207 ERVK-24P63145 666 aa18.79■□□□□ 0.6
USB1-208ENST00000563207 UBE3CQ15386 1083 aa18.79■□□□□ 0.6
USB1-208ENST00000563207 CCL14Q16627 93 aa18.79■□□□□ 0.6
USB1-208ENST00000563207 C12orf42Q96LP6 360 aa18.79■□□□□ 0.6
USB1-208ENST00000563207 KIAA1683Q9H0B3 1180 aa18.79■□□□□ 0.6
USB1-208ENST00000563207 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.79■□□□□ 0.6
USB1-208ENST00000563207 MYH8P13535 1937 aa18.78■□□□□ 0.6
USB1-208ENST00000563207 CATSPERGQ6ZRH7 1159 aa18.78■□□□□ 0.6
USB1-208ENST00000563207 SIAH1Q8IUQ4 282 aa18.78■□□□□ 0.6
USB1-208ENST00000563207 CRISPLD2Q9H0B8 497 aa18.78■□□□□ 0.6
USB1-208ENST00000563207 PUS7LQ9H0K6 701 aaKnown RBP18.78■□□□□ 0.6
USB1-208ENST00000563207 BTBD7Q9P203 1132 aa18.78■□□□□ 0.6
USB1-208ENST00000563207 PCDH10Q9P2E7 1040 aa18.78■□□□□ 0.6
USB1-208ENST00000563207 USP17L15C9J2P7 530 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 USP17L13C9JLJ4 530 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 USP17L11C9JVI0 530 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 USP17L18D6R9N7 530 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 USP17L22D6RA61 530 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 USP17L17D6RBQ6 530 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 USP17L19D6RCP7 530 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 USP17L20D6RJB6 530 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 HMGCRP04035 888 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 AKR1B1P15121 316 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 USP17L24Q0WX57 530 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 GPR142Q7Z601 462 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 USP6NLQ92738 828 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms