RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 ZSWIM4Q9H7M6 989 aa8.41□□□□□ -1.06
CHD9-205ENST00000562785 MSRB2Q9Y3D2 182 aa8.41□□□□□ -1.06
CHD9-205ENST00000562785 PRDM2Q13029 1718 aa8.4□□□□□ -1.06
CHD9-205ENST00000562785 C1QTNF9BB2RNN3 333 aa8.4□□□□□ -1.06
CHD9-205ENST00000562785 K7ELQ4 463 aaPredicted RBP8.4□□□□□ -1.06
CHD9-205ENST00000562785 POLR2BP30876 1174 aaKnown RBP8.4□□□□□ -1.06
CHD9-205ENST00000562785 NFE2L2Q16236 605 aa8.4□□□□□ -1.06
CHD9-205ENST00000562785 FXNQ16595 210 aa8.4□□□□□ -1.06
CHD9-205ENST00000562785 LARP1BQ659C4 914 aaKnown RBP8.4□□□□□ -1.06
CHD9-205ENST00000562785 SEZ6L2Q6UXD5 910 aa8.4□□□□□ -1.06
CHD9-205ENST00000562785 CCDC74BQ96LY2 380 aa8.4□□□□□ -1.06
CHD9-205ENST00000562785 PSMG3-AS1Q96PY0 264 aa8.4□□□□□ -1.06
CHD9-205ENST00000562785 PIF1Q9H611 641 aa8.4□□□□□ -1.06
CHD9-205ENST00000562785 PHAXQ9H814 394 aaKnown RBP8.4□□□□□ -1.06
CHD9-205ENST00000562785 LTBP3Q9NS15 1303 aa8.39□□□□□ -1.07
CHD9-205ENST00000562785 UBOX5O94941 541 aa8.39□□□□□ -1.07
CHD9-205ENST00000562785 RASA3Q14644 834 aa8.39□□□□□ -1.07
CHD9-205ENST00000562785 BMS1Q14692 1282 aaKnown RBP8.39□□□□□ -1.07
CHD9-205ENST00000562785 LRP10Q7Z4F1 713 aa8.39□□□□□ -1.07
CHD9-205ENST00000562785 NOP9Q86U38 636 aaKnown RBP8.39□□□□□ -1.07
CHD9-205ENST00000562785 KIF2CQ99661 725 aa8.39□□□□□ -1.07
CHD9-205ENST00000562785 MAPK8IP1Q9UQF2 711 aa8.39□□□□□ -1.07
CHD9-205ENST00000562785 FAM95CA0A1B0GW59 222 aa8.38□□□□□ -1.07
CHD9-205ENST00000562785 DHX15O43143 795 aaKnown RBP8.38□□□□□ -1.07
CHD9-205ENST00000562785 DYNC1LI2O43237 492 aaPredicted RBP8.38□□□□□ -1.07
CHD9-205ENST00000562785 RXRBP28702 533 aa8.38□□□□□ -1.07
CHD9-205ENST00000562785 KCNMA1Q12791 1236 aa8.38□□□□□ -1.07
CHD9-205ENST00000562785 MICAL1Q8TDZ2 1067 aa8.38□□□□□ -1.07
CHD9-205ENST00000562785 CDK11AQ9UQ88 783 aaPredicted RBP8.38□□□□□ -1.07
CHD9-205ENST00000562785 GSK3AP49840 483 aa8.37□□□□□ -1.07
CHD9-205ENST00000562785 BAHD1Q8TBE0 780 aaPredicted RBP8.37□□□□□ -1.07
CHD9-205ENST00000562785 XAGE3Q8WTP9 111 aa8.37□□□□□ -1.07
CHD9-205ENST00000562785 PPP1R13LQ8WUF5 828 aa8.37□□□□□ -1.07
CHD9-205ENST00000562785 CCDC113Q9H0I3 377 aa8.37□□□□□ -1.07
CHD9-205ENST00000562785 SNTG2Q9NY99 539 aa8.37□□□□□ -1.07
CHD9-205ENST00000562785 ZNF214Q9UL59 606 aaPredicted RBP8.37□□□□□ -1.07
CHD9-205ENST00000562785 FAM86C2PA6NEL3 165 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 GJB6O95452 261 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 GBP1P32455 592 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 PAOXQ6QHF9 649 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 C6orf15Q6UXA7 325 aaPredicted RBP8.36□□□□□ -1.07
CHD9-205ENST00000562785 BEND4Q6ZU67 534 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 CLEC10AQ8IUN9 316 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 TMEM192Q8IY95 271 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 DNAJB8Q8NHS0 232 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 DHRS1Q96LJ7 313 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 SLC6A18Q96N87 628 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 DEPDC7Q96QD5 511 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 SRPK1Q96SB4 655 aaKnown RBP8.36□□□□□ -1.07
CHD9-205ENST00000562785 KCNF1Q9H3M0 494 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 LGR6Q9HBX8 967 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 PRDM10Q9NQV6 1147 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 ST7Q9NRC1 585 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 C1GALT1Q9NS00 363 aa8.36□□□□□ -1.07
CHD9-205ENST00000562785 B2RBV5 119 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 SLITRK5O94991 958 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 GATA4P43694 442 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 PMS1P54277 932 aaKnown RBP8.35□□□□□ -1.07
CHD9-205ENST00000562785 RASSF7Q02833 373 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 NCAPHQ15003 741 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 LETMD1Q6P1Q0 360 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 GIMAP6Q6P9H5 292 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 VHLLQ6RSH7 139 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 FAM178BQ8IXR5 827 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 MRFAP1L1Q96HT8 127 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 MIPEPQ99797 713 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 FAM83CQ9BQN1 747 aa8.35□□□□□ -1.07
CHD9-205ENST00000562785 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.35□□□□□ -1.07
CHD9-205ENST00000562785 SUCOQ9UBS9 1254 aaKnown RBP8.35□□□□□ -1.07
CHD9-205ENST00000562785 COL17A1Q9UMD9 1497 aaPredicted RBP8.34□□□□□ -1.07
CHD9-205ENST00000562785 DDAH1O94760 285 aa8.34□□□□□ -1.07
CHD9-205ENST00000562785 CDK5R2Q13319 367 aa8.34□□□□□ -1.07
CHD9-205ENST00000562785 NFKBIBQ15653 356 aa8.34□□□□□ -1.07
CHD9-205ENST00000562785 ZNF746Q6NUN9 644 aaPredicted RBP8.34□□□□□ -1.07
CHD9-205ENST00000562785 KLHL6Q8WZ60 621 aa8.34□□□□□ -1.07
CHD9-205ENST00000562785 CEP131Q9UPN4 1083 aa8.34□□□□□ -1.07
CHD9-205ENST00000562785 FAM221BA6H8Z2 402 aa8.33□□□□□ -1.08
CHD9-205ENST00000562785 PDPK1O15530 556 aa8.33□□□□□ -1.08
CHD9-205ENST00000562785 CLEC3AO75596 197 aa8.33□□□□□ -1.08
CHD9-205ENST00000562785 RASGRF1Q13972 1273 aa8.33□□□□□ -1.08
CHD9-205ENST00000562785 BBS9Q3SYG4 887 aa8.33□□□□□ -1.08
CHD9-205ENST00000562785 MRM1Q6IN84 353 aaKnown RBP8.33□□□□□ -1.08
CHD9-205ENST00000562785 PPFIBP1Q86W92 1011 aa8.33□□□□□ -1.08
CHD9-205ENST00000562785 DUSP23Q9BVJ7 150 aa8.33□□□□□ -1.08
CHD9-205ENST00000562785 PCDHB10Q9UN67 800 aa8.33□□□□□ -1.08
CHD9-205ENST00000562785 RAXQ9Y2V3 346 aa8.33□□□□□ -1.08
CHD9-205ENST00000562785 LAMC3Q9Y6N6 1575 aa8.33□□□□□ -1.08
CHD9-205ENST00000562785 CFTRP13569 1480 aa8.32□□□□□ -1.08
CHD9-205ENST00000562785 ITGB2P05107 769 aa8.32□□□□□ -1.08
CHD9-205ENST00000562785 ETV3P41162 512 aa8.32□□□□□ -1.08
CHD9-205ENST00000562785 SLC7A5Q01650 507 aa8.32□□□□□ -1.08
CHD9-205ENST00000562785 GNPTABQ3T906 1256 aa8.32□□□□□ -1.08
CHD9-205ENST00000562785 TOP6BLQ8N6T0 577 aa8.32□□□□□ -1.08
CHD9-205ENST00000562785 RIN3Q8TB24 985 aa8.32□□□□□ -1.08
CHD9-205ENST00000562785 GATA6Q92908 595 aa8.32□□□□□ -1.08
CHD9-205ENST00000562785 SMARCC1Q92922 1105 aaPredicted RBP8.32□□□□□ -1.08
CHD9-205ENST00000562785 TP53INP1Q96A56 240 aa8.32□□□□□ -1.08
CHD9-205ENST00000562785 C7orf69Q9H7B7 122 aa8.32□□□□□ -1.08
CHD9-205ENST00000562785 CCDC85CA6NKD9 419 aa8.31□□□□□ -1.08
CHD9-205ENST00000562785 EOMESO95936 686 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms