RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 GDF11O95390 407 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 AKR1B1P15121 316 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 INPP5BP32019 993 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 ANAPC15P60006 121 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 ZNF444Q8N0Y2 327 aaPredicted RBP13.7□□□□□ -0.22
HERC1-214ENST00000561400 NCOA7Q8NI08 942 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 IL17RAQ96F46 866 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 WRNIP1Q96S55 665 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 PRDM16Q9HAZ2 1276 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 ZSWIM5Q9P217 1185 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 ANGEL1Q9UNK9 670 aaKnown RBP13.7□□□□□ -0.22
HERC1-214ENST00000561400 DOCK1Q14185 1865 aa13.69□□□□□ -0.22
HERC1-214ENST00000561400 CPA1P15085 419 aa13.69□□□□□ -0.22
HERC1-214ENST00000561400 CAP2P40123 477 aa13.69□□□□□ -0.22
HERC1-214ENST00000561400 TRDNQ13061 729 aa13.69□□□□□ -0.22
HERC1-214ENST00000561400 KRT32Q14532 448 aa13.69□□□□□ -0.22
HERC1-214ENST00000561400 CYB5R4Q7L1T6 521 aa13.69□□□□□ -0.22
HERC1-214ENST00000561400 MB21D2Q8IYB1 491 aaPredicted RBP13.69□□□□□ -0.22
HERC1-214ENST00000561400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.69□□□□□ -0.22
HERC1-214ENST00000561400 ZKSCAN4Q969J2 545 aaPredicted RBP13.69□□□□□ -0.22
HERC1-214ENST00000561400 JAKMIP1Q96N16 626 aaKnown RBP13.69□□□□□ -0.22
HERC1-214ENST00000561400 NEK1Q96PY6 1258 aa13.69□□□□□ -0.22
HERC1-214ENST00000561400 KRT23Q9C075 422 aa13.69□□□□□ -0.22
HERC1-214ENST00000561400 CNNM2Q9H8M5 875 aa13.69□□□□□ -0.22
HERC1-214ENST00000561400 TFAP4Q01664 338 aa13.68□□□□□ -0.22
HERC1-214ENST00000561400 RALYLQ86SE5 291 aaKnown RBP13.68□□□□□ -0.22
HERC1-214ENST00000561400 ESR2Q92731 530 aa13.68□□□□□ -0.22
HERC1-214ENST00000561400 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.68□□□□□ -0.22
HERC1-214ENST00000561400 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.68□□□□□ -0.22
HERC1-214ENST00000561400 PLCB2Q00722 1185 aa13.68□□□□□ -0.22
HERC1-214ENST00000561400 TTLL12Q14166 644 aaPredicted RBP13.68□□□□□ -0.22
HERC1-214ENST00000561400 MAP3K11Q16584 847 aa13.68□□□□□ -0.22
HERC1-214ENST00000561400 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.68□□□□□ -0.22
HERC1-214ENST00000561400 CHST3Q7LGC8 479 aa13.68□□□□□ -0.22
HERC1-214ENST00000561400 CCDC17Q96LX7 622 aa13.68□□□□□ -0.22
HERC1-214ENST00000561400 YY1AP1Q9H869 796 aa13.68□□□□□ -0.22
HERC1-214ENST00000561400 TSPY2A6NKD2 308 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 UBE2Q2LH0YL09 131 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 NMT2O60551 498 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 CTNND1O60716 968 aaKnown RBP13.67□□□□□ -0.22
HERC1-214ENST00000561400 GH2P01242 217 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
HERC1-214ENST00000561400 GUCY1A2P33402 732 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 ANTXR2P58335 489 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 FSTL1Q12841 308 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 ABCB5Q2M3G0 1257 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
HERC1-214ENST00000561400 GBA2Q9HCG7 927 aaPredicted RBP13.67□□□□□ -0.22
HERC1-214ENST00000561400 PHIPQ8WWQ0 1821 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 MYH4Q9Y623 1939 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 MPHOSPH10O00566 681 aaKnown RBP13.67□□□□□ -0.22
HERC1-214ENST00000561400 TSPY3P0CV98 308 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 TSPY8P0CW00 308 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 MAP3K9P80192 1104 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 EGFL6Q8IUX8 553 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 NEDD1Q8NHV4 660 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 TRIM44Q96DX7 344 aaPredicted RBP13.67□□□□□ -0.22
HERC1-214ENST00000561400 TCEANC2Q96MN5 208 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 ZKSCAN3Q9BRR0 538 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 TM6SF1Q9BZW5 370 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 ZSWIM6Q9HCJ5 1215 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 IL17RBQ9NRM6 502 aa13.67□□□□□ -0.22
HERC1-214ENST00000561400 IREB2P48200 963 aaKnown RBP13.66□□□□□ -0.22
HERC1-214ENST00000561400 VGLL4Q14135 290 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 SEPT2Q15019 361 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 LDLRAD1Q5T700 205 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 ARMC9Q7Z3E5 817 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 CLEC10AQ8IUN9 316 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 CLMNQ96JQ2 1002 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 ZBTB21Q9ULJ3 1066 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 PLIN4Q96Q06 1357 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 IGKV6D-41A0A0C4DH26 115 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 PSMA5P28066 241 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 MCM5P33992 734 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 TERF1P54274 439 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 FKBP1BP68106 108 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 EXOSC10Q01780 885 aaKnown RBP13.66□□□□□ -0.22
HERC1-214ENST00000561400 BLOC1S2Q6QNY1 142 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 DHX32Q7L7V1 743 aaKnown RBP13.66□□□□□ -0.22
HERC1-214ENST00000561400 CCDC84Q86UT8 332 aaPredicted RBP13.66□□□□□ -0.22
HERC1-214ENST00000561400 C2orf69Q8N8R5 385 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 LRRC2Q9BYS8 371 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 GEMIN8Q9NWZ8 242 aaKnown RBP13.66□□□□□ -0.22
HERC1-214ENST00000561400 SNCAIPQ9Y6H5 919 aa13.66□□□□□ -0.22
HERC1-214ENST00000561400 PRC1O43663 620 aa13.65□□□□□ -0.22
HERC1-214ENST00000561400 ASNSP08243 561 aa13.65□□□□□ -0.22
HERC1-214ENST00000561400 RPS6KB1P23443 525 aa13.65□□□□□ -0.22
HERC1-214ENST00000561400 RAB3GAP1Q15042 981 aa13.65□□□□□ -0.22
HERC1-214ENST00000561400 TMEM179Q6ZVK1 233 aa13.65□□□□□ -0.22
HERC1-214ENST00000561400 RUFY3Q7L099 469 aa13.65□□□□□ -0.22
HERC1-214ENST00000561400 ANKRD13AQ8IZ07 590 aa13.65□□□□□ -0.22
HERC1-214ENST00000561400 SCYL3Q8IZE3 742 aa13.65□□□□□ -0.22
HERC1-214ENST00000561400 CEP120Q8N960 986 aa13.65□□□□□ -0.22
HERC1-214ENST00000561400 CEP95Q96GE4 821 aa13.65□□□□□ -0.22
HERC1-214ENST00000561400 CABP5Q9NP86 173 aa13.65□□□□□ -0.22
HERC1-214ENST00000561400 GPHNQ9NQX3 736 aaPredicted RBP13.65□□□□□ -0.22
HERC1-214ENST00000561400 NOL9Q5SY16 702 aaKnown RBP13.64□□□□□ -0.23
HERC1-214ENST00000561400 SIAH1Q8IUQ4 282 aa13.64□□□□□ -0.23
HERC1-214ENST00000561400 NT5C2P49902 561 aa13.64□□□□□ -0.23
HERC1-214ENST00000561400 RCSD1Q6JBY9 416 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms