RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 AFAP1L2Q8N4X5 818 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 DSCC1Q9BVC3 393 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 BLZF1Q9H2G9 400 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 TRIM35Q9UPQ4 493 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 NPC1L1Q9UHC9 1359 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 LGSNQ5TDP6 509 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 ADALQ6DHV7 355 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 TBC1D7Q9P0N9 293 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 SERTAD1Q9UHV2 236 aa14.03□□□□□ -0.16
SYNM-203ENST00000560674 I3L4J1 428 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 CASQ2O14958 399 aaPredicted RBP14.02□□□□□ -0.16
SYNM-203ENST00000560674 UFL1O94874 794 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 KRT71Q3SY84 523 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 DENND2CQ68D51 928 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 GABPB2Q8TAK5 448 aaPredicted RBP14.02□□□□□ -0.16
SYNM-203ENST00000560674 RAB17Q9H0T7 212 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 E7EWF7 191 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 EXOC3O60645 756 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 ADKP55263 362 aaKnown RBP14.02□□□□□ -0.16
SYNM-203ENST00000560674 TAF12Q16514 161 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 SEPT14Q6ZU15 432 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 RRAGAQ7L523 313 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 NELFCDQ8IXH7 590 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 JDP2Q8WYK2 163 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 LPIN2Q92539 896 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 PARP2Q9UGN5 583 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 USTQ9Y2C2 406 aa14.02□□□□□ -0.16
SYNM-203ENST00000560674 KRT15P19012 456 aa14.02□□□□□ -0.17
SYNM-203ENST00000560674 NBPF14Q5TI25 921 aa14.02□□□□□ -0.17
SYNM-203ENST00000560674 GPIHBP1Q8IV16 184 aa14.02□□□□□ -0.17
SYNM-203ENST00000560674 MYCT1Q8N699 235 aa14.02□□□□□ -0.17
SYNM-203ENST00000560674 MAIP1Q8WWC4 291 aa14.02□□□□□ -0.17
SYNM-203ENST00000560674 PFDN4Q9NQP4 134 aa14.02□□□□□ -0.17
SYNM-203ENST00000560674 SBNO1A3KN83 1393 aa14.02□□□□□ -0.17
SYNM-203ENST00000560674 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.02□□□□□ -0.17
SYNM-203ENST00000560674 DAPK3O43293 454 aa14.02□□□□□ -0.17
SYNM-203ENST00000560674 ME3Q16798 604 aa14.02□□□□□ -0.17
SYNM-203ENST00000560674 DCUN1D2Q6PH85 259 aa14.02□□□□□ -0.17
SYNM-203ENST00000560674 PPANQ9NQ55 473 aaKnown RBP14.02□□□□□ -0.17
SYNM-203ENST00000560674 CCDC117Q8IWD4 279 aaPredicted RBP14.02□□□□□ -0.17
SYNM-203ENST00000560674 RNF34Q969K3 372 aa14.02□□□□□ -0.17
SYNM-203ENST00000560674 FAM207AQ9NSI2 230 aaPredicted RBP14.02□□□□□ -0.17
SYNM-203ENST00000560674 AATFQ9NY61 560 aaKnown RBP eCLIP14.02□□□□□ -0.17
SYNM-203ENST00000560674 GCNT3O95395 438 aa14.01□□□□□ -0.17
SYNM-203ENST00000560674 KIAA1468Q9P260 1216 aa14.01□□□□□ -0.17
SYNM-203ENST00000560674 KIF24Q5T7B8 1368 aa14.01□□□□□ -0.17
SYNM-203ENST00000560674 ERCC3P19447 782 aa14.01□□□□□ -0.17
SYNM-203ENST00000560674 MYSM1Q5VVJ2 828 aa14.01□□□□□ -0.17
SYNM-203ENST00000560674 STAMQ92783 540 aa14.01□□□□□ -0.17
SYNM-203ENST00000560674 DDX41Q9UJV9 622 aaKnown RBP14.01□□□□□ -0.17
SYNM-203ENST00000560674 ZNF518AQ6AHZ1 1483 aa14.01□□□□□ -0.17
SYNM-203ENST00000560674 TBC1D31Q96DN5 1066 aa14.01□□□□□ -0.17
SYNM-203ENST00000560674 MRPL44Q9H9J2 332 aaKnown RBP14.01□□□□□ -0.17
SYNM-203ENST00000560674 ZNF532Q9HCE3 1301 aa14.01□□□□□ -0.17
SYNM-203ENST00000560674 SSH2Q76I76 1423 aa14.01□□□□□ -0.17
SYNM-203ENST00000560674 PFKFB1P16118 471 aa14.01□□□□□ -0.17
SYNM-203ENST00000560674 GNA14O95837 355 aa14□□□□□ -0.17
SYNM-203ENST00000560674 PPARDQ03181 441 aa14□□□□□ -0.17
SYNM-203ENST00000560674 C2CD5Q86YS7 1000 aa14□□□□□ -0.17
SYNM-203ENST00000560674 SPATA5Q8NB90 893 aa14□□□□□ -0.17
SYNM-203ENST00000560674 TRIM58Q8NG06 486 aa14□□□□□ -0.17
SYNM-203ENST00000560674 ABCA5Q8WWZ7 1642 aa14□□□□□ -0.17
SYNM-203ENST00000560674 ATP10BO94823 1461 aa14□□□□□ -0.17
SYNM-203ENST00000560674 DTNBO60941 627 aa14□□□□□ -0.17
SYNM-203ENST00000560674 MAEAQ7L5Y9 396 aa14□□□□□ -0.17
SYNM-203ENST00000560674 EPSTI1Q96J88 318 aa14□□□□□ -0.17
SYNM-203ENST00000560674 NUF2Q9BZD4 464 aa14□□□□□ -0.17
SYNM-203ENST00000560674 VCXQ9H320 206 aa14□□□□□ -0.17
SYNM-203ENST00000560674 NDUFB9Q9Y6M9 179 aa14□□□□□ -0.17
SYNM-203ENST00000560674 MAST3O60307 1309 aa14□□□□□ -0.17
SYNM-203ENST00000560674 UHRF1BP1Q6BDS2 1440 aa14□□□□□ -0.17
SYNM-203ENST00000560674 LONRF2Q1L5Z9 754 aa14□□□□□ -0.17
SYNM-203ENST00000560674 PHLDB2Q86SQ0 1253 aa14□□□□□ -0.17
SYNM-203ENST00000560674 CEP120Q8N960 986 aa14□□□□□ -0.17
SYNM-203ENST00000560674 CNBD1Q8NA66 436 aa14□□□□□ -0.17
SYNM-203ENST00000560674 VPS54Q9P1Q0 977 aa14□□□□□ -0.17
SYNM-203ENST00000560674 ZAP70P43403 619 aa14□□□□□ -0.17
SYNM-203ENST00000560674 GCKRQ14397 625 aa14□□□□□ -0.17
SYNM-203ENST00000560674 ZSCAN26Q16670 478 aa14□□□□□ -0.17
SYNM-203ENST00000560674 CCDC38Q502W7 563 aa14□□□□□ -0.17
SYNM-203ENST00000560674 OR8K1Q8NGG5 319 aa14□□□□□ -0.17
SYNM-203ENST00000560674 TFCP2L1Q9NZI6 479 aa14□□□□□ -0.17
SYNM-203ENST00000560674 TACC3Q9Y6A5 838 aa14□□□□□ -0.17
SYNM-203ENST00000560674 NLRC4Q9NPP4 1024 aa14□□□□□ -0.17
SYNM-203ENST00000560674 AMFRQ9UKV5 643 aa14□□□□□ -0.17
SYNM-203ENST00000560674 ZNF500O60304 480 aaPredicted RBP13.99□□□□□ -0.17
SYNM-203ENST00000560674 RNF40O75150 1001 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 MYO1AQ9UBC5 1043 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 EDC4Q6P2E9 1401 aaKnown RBP13.99□□□□□ -0.17
SYNM-203ENST00000560674 KCNJ18B7U540 433 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 KIF3CO14782 793 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 GNPATO15228 680 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 ATP5JP18859 108 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 KCNJ12Q14500 433 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 GDAP1L1Q96MZ0 367 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 CTNNA1P35221 906 aaKnown RBP13.99□□□□□ -0.17
SYNM-203ENST00000560674 SLC1A4P43007 532 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 RAD51AP2Q09MP3 1159 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 ANKRD20A3Q5VUR7 823 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 CDAN1Q8IWY9 1227 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms