RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 STAP2Q9UGK3 403 aa21.13■□□□□ 0.97
SMAD3-210ENST00000559092 USP17L15C9J2P7 530 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 USP17L13C9JLJ4 530 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 USP17L11C9JVI0 530 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 USP17L18D6R9N7 530 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 USP17L22D6RA61 530 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 USP17L17D6RBQ6 530 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 USP17L19D6RCP7 530 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 USP17L20D6RJB6 530 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 MPHOSPH10O00566 681 aaKnown RBP21.12■□□□□ 0.97
SMAD3-210ENST00000559092 CDK8P49336 464 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 FLT3LGP49771 235 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 USP17L24Q0WX57 530 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 SBK1Q52WX2 424 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 CTR9Q6PD62 1173 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 C16orf86Q6ZW13 317 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 SLC44A5Q8NCS7 719 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 SLAIN1Q8ND83 568 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 GPRC5AQ8NFJ5 357 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 DYNLL2Q96FJ2 89 aa21.12■□□□□ 0.97
SMAD3-210ENST00000559092 GSG1L2A8MUP6 293 aa21.11■□□□□ 0.97
SMAD3-210ENST00000559092 PXYLP1Q8TE99 480 aa21.11■□□□□ 0.97
SMAD3-210ENST00000559092 GABRQQ9UN88 632 aa21.11■□□□□ 0.97
SMAD3-210ENST00000559092 PTPRFP10586 1907 aa21.11■□□□□ 0.97
SMAD3-210ENST00000559092 LOC285556D6RIA3 1793 aa21.1■□□□□ 0.97
SMAD3-210ENST00000559092 MYH1P12882 1939 aa21.1■□□□□ 0.97
SMAD3-210ENST00000559092 CYP2D7A0A087X1C5 515 aa21.1■□□□□ 0.97
SMAD3-210ENST00000559092 GPAA1O43292 621 aa21.1■□□□□ 0.97
SMAD3-210ENST00000559092 CATSPERGQ6ZRH7 1159 aa21.1■□□□□ 0.97
SMAD3-210ENST00000559092 TICAM2Q86XR7 235 aa21.1■□□□□ 0.97
SMAD3-210ENST00000559092 RBPJLQ9UBG7 517 aa21.1■□□□□ 0.97
SMAD3-210ENST00000559092 ADCY3O60266 1144 aa21.09■□□□□ 0.97
SMAD3-210ENST00000559092 VCAM1P19320 739 aa21.09■□□□□ 0.97
SMAD3-210ENST00000559092 EN2P19622 333 aaPredicted RBP21.09■□□□□ 0.97
SMAD3-210ENST00000559092 UBXN2AP68543 259 aa21.09■□□□□ 0.97
SMAD3-210ENST00000559092 ZYXQ15942 572 aaKnown RBP21.09■□□□□ 0.97
SMAD3-210ENST00000559092 FSD1Q9BTV5 496 aa21.09■□□□□ 0.97
SMAD3-210ENST00000559092 DDX60LQ5H9U9 1706 aaKnown RBP21.09■□□□□ 0.97
SMAD3-210ENST00000559092 A0A1W2PRG0 241 aa21.08■□□□□ 0.97
SMAD3-210ENST00000559092 PATL2C9JE40 543 aaKnown RBP21.08■□□□□ 0.97
SMAD3-210ENST00000559092 AKR1B1P15121 316 aa21.08■□□□□ 0.97
SMAD3-210ENST00000559092 PDE1AP54750 535 aa21.08■□□□□ 0.97
SMAD3-210ENST00000559092 LBX2Q6XYB7 198 aa21.08■□□□□ 0.97
SMAD3-210ENST00000559092 SMC5Q8IY18 1101 aa21.08■□□□□ 0.97
SMAD3-210ENST00000559092 SH2D4AQ9H788 454 aa21.08■□□□□ 0.97
SMAD3-210ENST00000559092 TXNRD2Q9NNW7 524 aa21.08■□□□□ 0.97
SMAD3-210ENST00000559092 BIN2Q9UBW5 565 aaPredicted RBP21.08■□□□□ 0.97
SMAD3-210ENST00000559092 GJD2Q9UKL4 321 aa21.08■□□□□ 0.97
SMAD3-210ENST00000559092 RABGAP1Q9Y3P9 1069 aa21.08■□□□□ 0.97
SMAD3-210ENST00000559092 ATAD5Q96QE3 1844 aa21.08■□□□□ 0.96
SMAD3-210ENST00000559092 BRCA2P51587 3418 aa21.08■□□□□ 0.96
SMAD3-210ENST00000559092 MAPK4P31152 587 aa21.07■□□□□ 0.96
SMAD3-210ENST00000559092 ERVK-9P63128 1117 aa21.07■□□□□ 0.96
SMAD3-210ENST00000559092 ERVK-24P63145 666 aa21.07■□□□□ 0.96
SMAD3-210ENST00000559092 ZMYM1Q5SVZ6 1142 aa21.07■□□□□ 0.96
SMAD3-210ENST00000559092 SIAH1Q8IUQ4 282 aa21.07■□□□□ 0.96
SMAD3-210ENST00000559092 EXOC6Q8TAG9 804 aa21.07■□□□□ 0.96
SMAD3-210ENST00000559092 EVI5LQ96CN4 794 aa21.07■□□□□ 0.96
SMAD3-210ENST00000559092 NACAP1Q9BZK3 213 aa21.07■□□□□ 0.96
SMAD3-210ENST00000559092 KANSL2Q9H9L4 492 aa21.07■□□□□ 0.96
SMAD3-210ENST00000559092 ARHGEF10LQ9HCE6 1279 aa21.07■□□□□ 0.96
SMAD3-210ENST00000559092 TMX2Q9Y320 296 aa21.07■□□□□ 0.96
SMAD3-210ENST00000559092 SMIM22K7EJ46 135 aa21.06■□□□□ 0.96
SMAD3-210ENST00000559092 M0R2C6 588 aa21.06■□□□□ 0.96
SMAD3-210ENST00000559092 TNRC18O15417 2968 aaPredicted RBP21.06■□□□□ 0.96
SMAD3-210ENST00000559092 NKX2-3Q8TAU0 364 aa21.06■□□□□ 0.96
SMAD3-210ENST00000559092 LPAR1Q92633 364 aa21.06■□□□□ 0.96
SMAD3-210ENST00000559092 RPAP3Q9H6T3 665 aaPredicted RBP21.06■□□□□ 0.96
SMAD3-210ENST00000559092 ZNF287Q9HBT7 754 aa21.06■□□□□ 0.96
SMAD3-210ENST00000559092 HOXC10Q9NYD6 342 aa21.06■□□□□ 0.96
SMAD3-210ENST00000559092 MYCP01106 439 aaPredicted RBP21.05■□□□□ 0.96
SMAD3-210ENST00000559092 APPP05067 770 aa21.05■□□□□ 0.96
SMAD3-210ENST00000559092 CAPN2P17655 700 aa21.05■□□□□ 0.96
SMAD3-210ENST00000559092 ICA1Q05084 483 aa21.05■□□□□ 0.96
SMAD3-210ENST00000559092 MTFR1Q15390 333 aa21.05■□□□□ 0.96
SMAD3-210ENST00000559092 Q3C1V9 767 aa21.05■□□□□ 0.96
SMAD3-210ENST00000559092 POTEEQ6S8J3 1075 aa21.05■□□□□ 0.96
SMAD3-210ENST00000559092 SUPT16HQ9Y5B9 1047 aaKnown RBP21.05■□□□□ 0.96
SMAD3-210ENST00000559092 NAV1Q8NEY1 1877 aa21.05■□□□□ 0.96
SMAD3-210ENST00000559092 MINDY4BA8MYZ0 360 aa21.04■□□□□ 0.96
SMAD3-210ENST00000559092 GJB1P08034 283 aa21.04■□□□□ 0.96
SMAD3-210ENST00000559092 CCL5P13501 91 aa21.04■□□□□ 0.96
SMAD3-210ENST00000559092 TDO2P48775 406 aa21.04■□□□□ 0.96
SMAD3-210ENST00000559092 CCNA1P78396 465 aa21.04■□□□□ 0.96
SMAD3-210ENST00000559092 COG2Q14746 738 aa21.04■□□□□ 0.96
SMAD3-210ENST00000559092 CCAR1Q8IX12 1150 aaKnown RBP21.04■□□□□ 0.96
SMAD3-210ENST00000559092 IFNL3Q8IZI9 196 aa21.04■□□□□ 0.96
SMAD3-210ENST00000559092 MKNK2Q9HBH9 465 aa21.04■□□□□ 0.96
SMAD3-210ENST00000559092 ROBO3Q96MS0 1386 aa21.03■□□□□ 0.96
SMAD3-210ENST00000559092 IGHDP01880 384 aa21.03■□□□□ 0.96
SMAD3-210ENST00000559092 XRCC5P13010 732 aaKnown RBP21.03■□□□□ 0.96
SMAD3-210ENST00000559092 ELNP15502 786 aa21.03■□□□□ 0.96
SMAD3-210ENST00000559092 SOCS4Q8WXH5 440 aa21.03■□□□□ 0.96
SMAD3-210ENST00000559092 SEC62Q99442 399 aaKnown RBP21.03■□□□□ 0.96
SMAD3-210ENST00000559092 PAGR1Q9BTK6 254 aa21.03■□□□□ 0.96
SMAD3-210ENST00000559092 LNPKQ9C0E8 428 aa21.03■□□□□ 0.96
SMAD3-210ENST00000559092 RNF208Q9H0X6 261 aa21.03■□□□□ 0.96
SMAD3-210ENST00000559092 EPB41L4AQ9HCS5 686 aaPredicted RBP21.03■□□□□ 0.96
SMAD3-210ENST00000559092 ZSWIM8A7E2V4 1837 aa21.03■□□□□ 0.96
SMAD3-210ENST00000559092 KIAA0100Q14667 2235 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms