RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
TPM1-215ENST00000558868 FER1L6Q2WGJ9 1857 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 GOLGB1Q14789 3259 aaKnown RBP15.99■□□□□ 0.15
TPM1-215ENST00000558868 ELP1O95163 1332 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 COL2A1P02458 1487 aaPredicted RBP15.99■□□□□ 0.15
TPM1-215ENST00000558868 FIBPO43427 364 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 XBP1P17861 261 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 FOSBP53539 338 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 DLGAP5Q15398 846 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 CIAPIN1Q6FI81 312 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 RCSD1Q6JBY9 416 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 SLC44A5Q8NCS7 719 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 PNMA1Q8ND90 353 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 SYAP1Q96A49 352 aaPredicted RBP15.99■□□□□ 0.15
TPM1-215ENST00000558868 CCDC17Q96LX7 622 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 TRIM34Q9BYJ4 488 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 IL17RBQ9NRM6 502 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 PI4KBQ9UBF8 816 aa15.99■□□□□ 0.15
TPM1-215ENST00000558868 PRPF3O43395 683 aaKnown RBP15.98■□□□□ 0.15
TPM1-215ENST00000558868 NMT2O60551 498 aa15.98■□□□□ 0.15
TPM1-215ENST00000558868 TOP1P11387 765 aaKnown RBP15.98■□□□□ 0.15
TPM1-215ENST00000558868 SAFBQ15424 915 aaKnown RBP eCLIP15.98■□□□□ 0.15
TPM1-215ENST00000558868 TMTC3Q6ZXV5 915 aa15.98■□□□□ 0.15
TPM1-215ENST00000558868 NBPF11Q86T75 865 aa15.98■□□□□ 0.15
TPM1-215ENST00000558868 FOXP4Q8IVH2 680 aaPredicted RBP15.98■□□□□ 0.15
TPM1-215ENST00000558868 MTMR14Q8NCE2 650 aa15.98■□□□□ 0.15
TPM1-215ENST00000558868 CHAMP1Q96JM3 812 aa15.98■□□□□ 0.15
TPM1-215ENST00000558868 LZTS2Q9BRK4 669 aa15.98■□□□□ 0.15
TPM1-215ENST00000558868 ADAMTSL1Q8N6G6 1762 aa15.98■□□□□ 0.15
TPM1-215ENST00000558868 PPFIA3O75145 1194 aa15.97■□□□□ 0.15
TPM1-215ENST00000558868 RPS12P25398 132 aaKnown RBP15.97■□□□□ 0.15
TPM1-215ENST00000558868 GUCY1B3Q02153 619 aa15.97■□□□□ 0.15
TPM1-215ENST00000558868 NFIAQ12857 509 aa15.97■□□□□ 0.15
TPM1-215ENST00000558868 GNL2Q13823 731 aaKnown RBP15.97■□□□□ 0.15
TPM1-215ENST00000558868 KRT40Q6A162 431 aa15.97■□□□□ 0.15
TPM1-215ENST00000558868 SPATA32Q96LK8 384 aa15.97■□□□□ 0.15
TPM1-215ENST00000558868 STX8Q9UNK0 236 aa15.97■□□□□ 0.15
TPM1-215ENST00000558868 SPDYE2BA6NHP3 402 aa15.96■□□□□ 0.15
TPM1-215ENST00000558868 NFKBIEO00221 500 aa15.96■□□□□ 0.15
TPM1-215ENST00000558868 SPDYE6P0CI01 402 aa15.96■□□□□ 0.15
TPM1-215ENST00000558868 NOVP48745 357 aa15.96■□□□□ 0.15
TPM1-215ENST00000558868 CXCL9Q07325 125 aa15.96■□□□□ 0.15
TPM1-215ENST00000558868 GRM4Q14833 912 aa15.96■□□□□ 0.15
TPM1-215ENST00000558868 FKBP1CQ5VVH2 108 aa15.96■□□□□ 0.15
TPM1-215ENST00000558868 ZSCAN29Q8IWY8 852 aaPredicted RBP15.96■□□□□ 0.15
TPM1-215ENST00000558868 TMEM47Q9BQJ4 181 aa15.96■□□□□ 0.15
TPM1-215ENST00000558868 GZF1Q9H116 711 aaPredicted RBP15.96■□□□□ 0.15
TPM1-215ENST00000558868 TDRD3Q9H7E2 651 aaKnown RBP15.96■□□□□ 0.15
TPM1-215ENST00000558868 GDPD2Q9HCC8 539 aa15.96■□□□□ 0.15
TPM1-215ENST00000558868 FAM198AQ9UFP1 575 aa15.96■□□□□ 0.15
TPM1-215ENST00000558868 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.15
TPM1-215ENST00000558868 TCHHQ07283 1943 aa15.96■□□□□ 0.14
TPM1-215ENST00000558868 GOLGA6L4A6NEF3 574 aa15.95■□□□□ 0.14
TPM1-215ENST00000558868 MYO1BO43795 1136 aa15.95■□□□□ 0.14
TPM1-215ENST00000558868 KIF23Q02241 960 aaPredicted RBP15.95■□□□□ 0.14
TPM1-215ENST00000558868 FUT2Q10981 343 aa15.95■□□□□ 0.14
TPM1-215ENST00000558868 GPT2Q8TD30 523 aa15.95■□□□□ 0.14
TPM1-215ENST00000558868 LEO1Q8WVC0 666 aaPredicted RBP15.95■□□□□ 0.14
TPM1-215ENST00000558868 PRMT6Q96LA8 375 aaPredicted RBP15.95■□□□□ 0.14
TPM1-215ENST00000558868 ATRNL1Q5VV63 1379 aa15.95■□□□□ 0.14
TPM1-215ENST00000558868 COL4A5P29400 1685 aa15.95■□□□□ 0.14
TPM1-215ENST00000558868 ARFGEF1Q9Y6D6 1849 aa15.94■□□□□ 0.14
TPM1-215ENST00000558868 SHMT1P34896 483 aa15.94■□□□□ 0.14
TPM1-215ENST00000558868 EIF6P56537 245 aaKnown RBP15.94■□□□□ 0.14
TPM1-215ENST00000558868 TCP10Q12799 353 aa15.94■□□□□ 0.14
TPM1-215ENST00000558868 OTUD7BQ6GQQ9 843 aa15.94■□□□□ 0.14
TPM1-215ENST00000558868 FAM173BQ6P4H8 233 aa15.94■□□□□ 0.14
TPM1-215ENST00000558868 CCDC82Q8N4S0 544 aa15.94■□□□□ 0.14
TPM1-215ENST00000558868 CEP95Q96GE4 821 aa15.94■□□□□ 0.14
TPM1-215ENST00000558868 MTMR4Q9NYA4 1195 aa15.94■□□□□ 0.14
TPM1-215ENST00000558868 TFIP11Q9UBB9 837 aaKnown RBP15.94■□□□□ 0.14
TPM1-215ENST00000558868 PCDHAC2Q9Y5I4 1007 aa15.94■□□□□ 0.14
TPM1-215ENST00000558868 MYH8P13535 1937 aa15.94■□□□□ 0.14
TPM1-215ENST00000558868 IGKV6D-41A0A0C4DH26 115 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 GADD45BO75293 160 aaPredicted RBP15.93■□□□□ 0.14
TPM1-215ENST00000558868 PLEKHA8P1O95397 391 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 TTLL1O95922 423 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 MMP1P03956 469 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 U2AF2P26368 475 aaKnown RBP eCLIP15.93■□□□□ 0.14
TPM1-215ENST00000558868 SMARCA1P28370 1054 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 CACNB3P54284 484 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 SPDYE2Q495Y8 402 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 CAVIN1Q6NZI2 390 aaKnown RBP15.93■□□□□ 0.14
TPM1-215ENST00000558868 METTL16Q86W50 562 aaKnown RBP15.93■□□□□ 0.14
TPM1-215ENST00000558868 FAM177A1Q8N128 213 aaPredicted RBP15.93■□□□□ 0.14
TPM1-215ENST00000558868 SRBD1Q8N5C6 995 aaKnown RBP15.93■□□□□ 0.14
TPM1-215ENST00000558868 FAM151AQ8WW52 585 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 AIFM3Q96NN9 605 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 FOXP1Q9H334 677 aaPredicted RBP15.93■□□□□ 0.14
TPM1-215ENST00000558868 BRMS1Q9HCU9 246 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 ZNF70Q9UC06 446 aaPredicted RBP15.93■□□□□ 0.14
TPM1-215ENST00000558868 HERC5Q9UII4 1024 aaKnown RBP15.93■□□□□ 0.14
TPM1-215ENST00000558868 RCOR1Q9UKL0 485 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
TPM1-215ENST00000558868 V9GY48 417 aaPredicted RBP15.93■□□□□ 0.14
TPM1-215ENST00000558868 MYH15Q9Y2K3 1946 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 CNTNAP5Q8WYK1 1306 aa15.93■□□□□ 0.14
TPM1-215ENST00000558868 DDTLA6NHG4 134 aaPredicted RBP15.92■□□□□ 0.14
TPM1-215ENST00000558868 LETM1O95202 739 aaPredicted RBP15.92■□□□□ 0.14
TPM1-215ENST00000558868 PARP1P09874 1014 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms