RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 USP14P54578 494 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 BACE1P56817 501 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 SP3Q02447 781 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 GABPAQ06546 454 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 ARHGEF6Q15052 776 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 RRP12Q5JTH9 1297 aaKnown RBP10.68□□□□□ -0.7
SPG11-207ENST00000558138 VPS53Q5VIR6 699 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 ZNF589Q86UQ0 364 aaPredicted RBP10.68□□□□□ -0.7
SPG11-207ENST00000558138 PROCA1Q8NCQ7 364 aaPredicted RBP10.68□□□□□ -0.7
SPG11-207ENST00000558138 ERO1AQ96HE7 468 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 WDR18Q9BV38 432 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 SH2D4AQ9H788 454 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 CPA4Q9UI42 421 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 ISY1Q9ULR0 285 aaKnown RBP10.68□□□□□ -0.7
SPG11-207ENST00000558138 PHIPQ8WWQ0 1821 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 TSPY2A6NKD2 308 aa10.67□□□□□ -0.7
SPG11-207ENST00000558138 HSPD1P10809 573 aaKnown RBP10.67□□□□□ -0.7
SPG11-207ENST00000558138 JAG1P78504 1218 aa10.67□□□□□ -0.7
SPG11-207ENST00000558138 CTDSPL2Q05D32 466 aa10.67□□□□□ -0.7
SPG11-207ENST00000558138 TREML2Q5T2D2 321 aa10.67□□□□□ -0.7
SPG11-207ENST00000558138 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
SPG11-207ENST00000558138 CASC1Q6TDU7 716 aa10.67□□□□□ -0.7
SPG11-207ENST00000558138 CTU1Q7Z7A3 348 aaKnown RBP10.67□□□□□ -0.7
SPG11-207ENST00000558138 CD99L2Q8TCZ2 262 aa10.67□□□□□ -0.7
SPG11-207ENST00000558138 R3HDMLQ9H3Y0 253 aa10.67□□□□□ -0.7
SPG11-207ENST00000558138 CWC22Q9HCG8 908 aaKnown RBP10.67□□□□□ -0.7
SPG11-207ENST00000558138 PPP4R2Q9NY27 417 aa10.67□□□□□ -0.7
SPG11-207ENST00000558138 SMIM22K7EJ46 135 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 RANBP6O60518 1105 aaKnown RBP10.66□□□□□ -0.7
SPG11-207ENST00000558138 TLR2O60603 784 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 HAND2P61296 217 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 GPAT2Q6NUI2 795 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 KIAA1211Q6ZU35 1233 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 SKAP1Q86WV1 359 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 CLEC10AQ8IUN9 316 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 CCAR1Q8IX12 1150 aaKnown RBP10.66□□□□□ -0.7
SPG11-207ENST00000558138 ACER1Q8TDN7 264 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 CFHR5Q9BXR6 569 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 TANGO6Q9C0B7 1094 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 KANSL2Q9H9L4 492 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 TRIM17Q9Y577 477 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 PTPRFP10586 1907 aa10.66□□□□□ -0.7
SPG11-207ENST00000558138 ROBO3Q96MS0 1386 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 RAD50Q92878 1312 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 ZNF213O14771 459 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 CAPN15O75808 1086 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 FMNL1O95466 1100 aaPredicted RBP10.65□□□□□ -0.7
SPG11-207ENST00000558138 RASA1P20936 1047 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 MOGSQ13724 837 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 SH3D19Q5HYK7 790 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 FAM47AQ5JRC9 791 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 ERICH6BQ5W0A0 696 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 ANKRD13CQ8N6S4 541 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 EFCC1Q9HA90 598 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 GOPCQ9HD26 462 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 CTNNA3Q9UI47 895 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 SLC45A1Q9Y2W3 748 aa10.65□□□□□ -0.7
SPG11-207ENST00000558138 LOC285556D6RIA3 1793 aa10.65□□□□□ -0.71
SPG11-207ENST00000558138 USP17L15C9J2P7 530 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 USP17L13C9JLJ4 530 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 USP17L11C9JVI0 530 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 USP17L18D6R9N7 530 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 USP17L22D6RA61 530 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 USP17L17D6RBQ6 530 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 USP17L19D6RCP7 530 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 USP17L20D6RJB6 530 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 FGAP02671 866 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 EEF2P13639 858 aaKnown RBP10.64□□□□□ -0.71
SPG11-207ENST00000558138 VCAM1P19320 739 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 CHMLP26374 656 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 GUCY1A2P33402 732 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 TFAP4Q01664 338 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 USP17L24Q0WX57 530 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 ALX1Q15699 326 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 IMMTQ16891 758 aaKnown RBP10.64□□□□□ -0.71
SPG11-207ENST00000558138 NOM1Q5C9Z4 860 aaKnown RBP10.64□□□□□ -0.71
SPG11-207ENST00000558138 MFSD6Q6ZSS7 791 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 SPICE1Q8N0Z3 855 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 PAGR1Q9BTK6 254 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 MCOLN1Q9GZU1 580 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 KIAA1683Q9H0B3 1180 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 ASCC2Q9H1I8 757 aaPredicted RBP10.64□□□□□ -0.71
SPG11-207ENST00000558138 RNF41Q9H4P4 317 aaPredicted RBP10.64□□□□□ -0.71
SPG11-207ENST00000558138 RPAP3Q9H6T3 665 aaPredicted RBP10.64□□□□□ -0.71
SPG11-207ENST00000558138 EMILIN3Q9NT22 766 aa10.64□□□□□ -0.71
SPG11-207ENST00000558138 HOXD10P28358 340 aa10.63□□□□□ -0.71
SPG11-207ENST00000558138 FCGRTP55899 365 aa10.63□□□□□ -0.71
SPG11-207ENST00000558138 PKN2Q16513 984 aaKnown RBP10.63□□□□□ -0.71
SPG11-207ENST00000558138 PPP4R3BQ5MIZ7 849 aa10.63□□□□□ -0.71
SPG11-207ENST00000558138 WDR78Q5VTH9 848 aa10.63□□□□□ -0.71
SPG11-207ENST00000558138 DSCC1Q9BVC3 393 aa10.63□□□□□ -0.71
SPG11-207ENST00000558138 CLIP2Q9UDT6 1046 aa10.63□□□□□ -0.71
SPG11-207ENST00000558138 STX8Q9UNK0 236 aa10.63□□□□□ -0.71
SPG11-207ENST00000558138 MTMR7Q9Y216 660 aa10.63□□□□□ -0.71
SPG11-207ENST00000558138 CTDP1Q9Y5B0 961 aaPredicted RBP10.63□□□□□ -0.71
SPG11-207ENST00000558138 ZMYM6O95789 1325 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 A0A1W2PRG0 241 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 TNPO2O14787 897 aaKnown RBP10.62□□□□□ -0.71
SPG11-207ENST00000558138 TTLL1O95922 423 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 PSMC4P43686 418 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms