RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 NRXN2Q9P2S2 1712 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 RGPD3A6NKT7 1758 aaPredicted RBP8.72□□□□□ -1.01
SPG11-204ENST00000557866 RGPD4Q7Z3J3 1758 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 CASZ1Q86V15 1759 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 MAGEB6P1A0A0J9YX57 407 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 ZNF213O14771 459 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 CAPN5O15484 640 aaPredicted RBP8.72□□□□□ -1.01
SPG11-204ENST00000557866 BRD1O95696 1058 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 APPP05067 770 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 HMGB1P09429 215 aaKnown RBP8.72□□□□□ -1.01
SPG11-204ENST00000557866 IL1R1P14778 569 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 BAG6P46379 1132 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 AGERQ15109 404 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 ANKRD1Q15327 319 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 NAA16Q6N069 864 aaPredicted RBP8.72□□□□□ -1.01
SPG11-204ENST00000557866 CLEC17AQ6ZS10 378 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 CHST3Q7LGC8 479 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 C2CD5Q86YS7 1000 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 FBXL16Q8N461 479 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 KIFC2Q96AC6 838 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 MASTLQ96GX5 879 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 INCENPQ9NQS7 918 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 TLL2Q9Y6L7 1015 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 SLC4A4Q9Y6R1 1079 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 ZMYM6O95789 1325 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 SALL1Q9NSC2 1324 aa8.72□□□□□ -1.01
SPG11-204ENST00000557866 SMIM22K7EJ46 135 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 BAG4O95429 457 aaKnown RBP8.71□□□□□ -1.02
SPG11-204ENST00000557866 GNAT2P19087 354 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 SF3B2Q13435 895 aaKnown RBP8.71□□□□□ -1.02
SPG11-204ENST00000557866 STYK1Q6J9G0 422 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 CYB5R4Q7L1T6 521 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 ZNF804AQ7Z570 1209 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 WDR66Q8TBY9 1149 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 SDR42E1Q8WUS8 393 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 BRF1Q92994 677 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 CHAMP1Q96JM3 812 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 TRIM47Q96LD4 638 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 CDK15Q96Q40 435 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.71□□□□□ -1.02
SPG11-204ENST00000557866 NEDD4P46934 1319 aa8.71□□□□□ -1.02
SPG11-204ENST00000557866 ANKRD31Q8N7Z5 1873 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 PRC1O43663 620 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 PFKFB2O60825 505 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 GJB2P29033 226 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 CHRNA5P30532 468 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 ALDH1B1P30837 517 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 CTDSPL2Q05D32 466 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 APOBRQ0VD83 1088 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 SCRN1Q12765 414 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 STK3Q13188 491 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 FOXD4L5Q5VV16 416 aaPredicted RBP8.7□□□□□ -1.02
SPG11-204ENST00000557866 NCOA7Q8NI08 942 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 C7orf43Q8WVR3 580 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 FOXD4L4Q8WXT5 416 aaPredicted RBP8.7□□□□□ -1.02
SPG11-204ENST00000557866 GTF3C6Q969F1 213 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 ZNF622Q969S3 477 aaKnown RBP eCLIP8.7□□□□□ -1.022e-6■■■□□ 16.3
SPG11-204ENST00000557866 NAPBQ9H115 298 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 SMC3Q9UQE7 1217 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 DOCK2Q92608 1830 aa8.7□□□□□ -1.02
SPG11-204ENST00000557866 CACNA1SQ13698 1873 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 MYO5AQ9Y4I1 1855 aaKnown RBP8.69□□□□□ -1.02
SPG11-204ENST00000557866 CYP2D7A0A087X1C5 515 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 B4E1Z4 1266 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 H0YIN7 160 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 JAK2O60674 1132 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 LDHBP07195 334 aaKnown RBP8.69□□□□□ -1.02
SPG11-204ENST00000557866 SYT1P21579 422 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 PDIA3P30101 505 aaKnown RBP8.69□□□□□ -1.02
SPG11-204ENST00000557866 MCM5P33992 734 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 TDO2P48775 406 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 EVCP57679 992 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 NNTQ13423 1086 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 PPP2R2DQ66LE6 453 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 SPTY2D1Q68D10 685 aaPredicted RBP8.69□□□□□ -1.02
SPG11-204ENST00000557866 TREML4Q6UXN2 200 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 PROCA1Q8NCQ7 364 aaPredicted RBP8.69□□□□□ -1.02
SPG11-204ENST00000557866 STAG1Q8WVM7 1258 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 GPKOWQ92917 476 aaPredicted RBP eCLIP8.69□□□□□ -1.02
SPG11-204ENST00000557866 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.69□□□□□ -1.02
SPG11-204ENST00000557866 NACAP1Q9BZK3 213 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 AATFQ9NY61 560 aaKnown RBP eCLIP8.69□□□□□ -1.02
SPG11-204ENST00000557866 BRPF3Q9ULD4 1205 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 FAM205AQ6ZU69 1335 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 WDR19Q8NEZ3 1342 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 DUOX1Q9NRD9 1551 aa8.69□□□□□ -1.02
SPG11-204ENST00000557866 SH2B2O14492 632 aaPredicted RBP8.68□□□□□ -1.02
SPG11-204ENST00000557866 IGSF3O75054 1194 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 CTDNEP1O95476 244 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 ADH1CP00326 375 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 PPARAQ07869 468 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 ARID5BQ14865 1188 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 AKNAD1Q5T1N1 836 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 GIMAP6Q6P9H5 292 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 TMED8Q6PL24 325 aaPredicted RBP8.68□□□□□ -1.02
SPG11-204ENST00000557866 DPP8Q6V1X1 898 aaPredicted RBP8.68□□□□□ -1.02
SPG11-204ENST00000557866 RALYLQ86SE5 291 aaKnown RBP8.68□□□□□ -1.02
SPG11-204ENST00000557866 DZIP1Q86YF9 867 aaKnown RBP8.68□□□□□ -1.02
SPG11-204ENST00000557866 SMARCC2Q8TAQ2 1214 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 IGDCC4Q8TDY8 1250 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms