RNA–Protein interactions for RNA: ENST00000557135.5

WARS-238, Transcript of tryptophanyl-tRNA synthetase, human

APPRIS P1 TSL 1 (best) BASIC

Gene WARS, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WARS-238	ENST00000557135	SERPINA10	Q9UK55	444 aa		11.5	□□□□□ -0.57
WARS-238	ENST00000557135	RCOR1	Q9UKL0	485 aa		11.5	□□□□□ -0.57
WARS-238	ENST00000557135	STX8	Q9UNK0	236 aa		11.5	□□□□□ -0.57
WARS-238	ENST00000557135	MTMR7	Q9Y216	660 aa		11.5	□□□□□ -0.57
WARS-238	ENST00000557135		V9GY48	417 aa	Predicted RBP	11.5	□□□□□ -0.57
WARS-238	ENST00000557135	TCP10	Q12799	353 aa		11.5	□□□□□ -0.57
WARS-238	ENST00000557135	PKN1	Q16512	942 aa		11.5	□□□□□ -0.57
WARS-238	ENST00000557135	L1TD1	Q5T7N2	865 aa	Known RBP	11.5	□□□□□ -0.57
WARS-238	ENST00000557135	BRAP	Q7Z569	592 aa		11.5	□□□□□ -0.57
WARS-238	ENST00000557135	RGS22	Q8NE09	1264 aa		11.5	□□□□□ -0.57
WARS-238	ENST00000557135	SYAP1	Q96A49	352 aa	Predicted RBP	11.5	□□□□□ -0.57
WARS-238	ENST00000557135	TMEM47	Q9BQJ4	181 aa		11.5	□□□□□ -0.57
WARS-238	ENST00000557135	CLIC4	Q9Y696	253 aa		11.5	□□□□□ -0.57
WARS-238	ENST00000557135	CNTNAP5	Q8WYK1	1306 aa		11.49	□□□□□ -0.57
WARS-238	ENST00000557135	GOLGA6L4	A6NEF3	574 aa		11.49	□□□□□ -0.57
WARS-238	ENST00000557135	PSMD14	O00487	310 aa		11.49	□□□□□ -0.57
WARS-238	ENST00000557135	PRPF3	O43395	683 aa	Known RBP	11.49	□□□□□ -0.57
WARS-238	ENST00000557135	XRCC6	P12956	609 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
WARS-238	ENST00000557135	AKR1B1	P15121	316 aa		11.49	□□□□□ -0.57
WARS-238	ENST00000557135	AKAP17A	Q02040	695 aa	Known RBP	11.49	□□□□□ -0.57
WARS-238	ENST00000557135	CFAP100	Q494V2	611 aa		11.49	□□□□□ -0.57
WARS-238	ENST00000557135	CCDC178	Q5BJE1	867 aa		11.49	□□□□□ -0.57
WARS-238	ENST00000557135	DALRD3	Q5D0E6	543 aa	Known RBP	11.49	□□□□□ -0.57
WARS-238	ENST00000557135	CCDC183	Q5T5S1	534 aa		11.49	□□□□□ -0.57
WARS-238	ENST00000557135	RASGRP2	Q7LDG7	609 aa		11.49	□□□□□ -0.57
WARS-238	ENST00000557135	PIBF1	Q8WXW3	757 aa		11.49	□□□□□ -0.57
WARS-238	ENST00000557135	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
WARS-238	ENST00000557135	TDRD3	Q9H7E2	651 aa	Known RBP	11.49	□□□□□ -0.57
WARS-238	ENST00000557135	GRPEL1	Q9HAV7	217 aa		11.49	□□□□□ -0.57
WARS-238	ENST00000557135	FAM198A	Q9UFP1	575 aa		11.49	□□□□□ -0.57
WARS-238	ENST00000557135	BTBD18	B2RXH4	712 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	MMP1	P03956	469 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	GNL2	Q13823	731 aa	Known RBP	11.48	□□□□□ -0.57
WARS-238	ENST00000557135	ATL3	Q6DD88	541 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.48	□□□□□ -0.57
WARS-238	ENST00000557135	STAG2	Q8N3U4	1231 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	CEP95	Q96GE4	821 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	PRMT6	Q96LA8	375 aa	Predicted RBP	11.48	□□□□□ -0.57
WARS-238	ENST00000557135	RTEL1	Q9NZ71	1219 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	VPS54	Q9P1Q0	977 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	SERPINB13	Q9UIV8	391 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.48	□□□□□ -0.57
WARS-238	ENST00000557135	U2AF2	P26368	475 aa	Known RBP eCLIP	11.48	□□□□□ -0.57	4e-9	■■■■■ 28.6
WARS-238	ENST00000557135	SHMT1	P34896	483 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	GRM4	Q14833	912 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	LRSAM1	Q6UWE0	723 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	SH3BP5L	Q7L8J4	393 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	CLEC10A	Q8IUN9	316 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	DIS3L2	Q8IYB7	885 aa	Known RBP	11.48	□□□□□ -0.57
WARS-238	ENST00000557135	BICD2	Q8TD16	824 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.48	□□□□□ -0.57	2e-43	■■■■■ 50
WARS-238	ENST00000557135	SGIP1	Q9BQI5	828 aa		11.48	□□□□□ -0.57
WARS-238	ENST00000557135	DDTL	A6NHG4	134 aa	Predicted RBP	11.47	□□□□□ -0.57
WARS-238	ENST00000557135	FAM196B	A6NMK8	535 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	HLA-DOA	P06340	250 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	VIL1	P09327	827 aa	Known RBP	11.47	□□□□□ -0.57
WARS-238	ENST00000557135	KIF5B	P33176	963 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	MRE11	P49959	708 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	SLC35G1	Q2M3R5	365 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	SOGA3	Q5TF21	947 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	NIM1K	Q8IY84	436 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	LINC00301	Q8NCQ3	95 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	OXER1	Q8TDS5	423 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	IDI2	Q9BXS1	227 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	PANK2	Q9BZ23	570 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	MAD2L2	Q9UI95	211 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	ISY1	Q9ULR0	285 aa	Known RBP	11.47	□□□□□ -0.57
WARS-238	ENST00000557135	PSME4	Q14997	1843 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	MYH6	P13533	1939 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	GOLGA8H	P0CJ92	632 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	VEGFA	P15692	232 aa	Predicted RBP	11.47	□□□□□ -0.57
WARS-238	ENST00000557135	ME1	P48163	572 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	NR5A1	Q13285	461 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	STK38	Q15208	465 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	SAFB	Q15424	915 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
WARS-238	ENST00000557135	ANO1	Q5XXA6	986 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	GML	Q99445	158 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	RBSN	Q9H1K0	784 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	DNAJC18	Q9H819	358 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	POLR3E	Q9NVU0	708 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	SWAP70	Q9UH65	585 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	ZNRF3	Q9ULT6	936 aa		11.47	□□□□□ -0.57
WARS-238	ENST00000557135	NASP	P49321	788 aa	Predicted RBP	11.46	□□□□□ -0.57
WARS-238	ENST00000557135	EIF6	P56537	245 aa	Known RBP	11.46	□□□□□ -0.57
WARS-238	ENST00000557135	NOSTRIN	Q8IVI9	506 aa		11.46	□□□□□ -0.57
WARS-238	ENST00000557135	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.46	□□□□□ -0.57
WARS-238	ENST00000557135	MAP3K14	Q99558	947 aa		11.46	□□□□□ -0.57
WARS-238	ENST00000557135	TAOK3	Q9H2K8	898 aa		11.46	□□□□□ -0.57
WARS-238	ENST00000557135	GOLPH3L	Q9H4A5	285 aa		11.46	□□□□□ -0.57
WARS-238	ENST00000557135	DACT1	Q9NYF0	836 aa		11.46	□□□□□ -0.57
WARS-238	ENST00000557135	PCDHA7	Q9UN72	937 aa		11.46	□□□□□ -0.57
WARS-238	ENST00000557135	PLIN4	Q96Q06	1357 aa		11.46	□□□□□ -0.58
WARS-238	ENST00000557135	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.45	□□□□□ -0.58
WARS-238	ENST00000557135	IGKV6D-41	A0A0C4DH26	115 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	NFKBIE	O00221	500 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	NR1I2	O75469	434 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	YEATS4	O95619	227 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	TOP1	P11387	765 aa	Known RBP	11.45	□□□□□ -0.58
WARS-238	ENST00000557135	PTGER2	P43116	358 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	NOV	P48745	357 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms